Gene: Sopen07g002340

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g002340
  • Transcript Identifier Sopen07g002340.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 1309250-1312665 : positive

Gene Family Information

  • ID HOM05D004774
  • #Genes/#Species 154/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g002340.1

Descriptions

  • Description RNA polymerase Rpb7 N-terminal domain-containing protein | FUNCTIONS IN: DNA-directed RNA polymerase activity | INVOLVED IN: transcription | LOCATED IN: cellular_component unknown | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb7, N-terminal , RNA polymerase III, subunit Rpc25
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT1G06790
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process AT1G06790

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G06790

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036898 RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 RNA polymerase Rpb7-like
IPR012340 Nucleic acid-binding, OB-fold
IPR005576 RNA polymerase Rpb7-like , N-terminal
IPR013238 RNA polymerase III, subunit Rpc25
Mapman id Description
35.1 not assigned.annotated