Gene: COL.COLO4_05101

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_05101
  • Transcript Identifier COL.rna3922
  • Gene Type Coding gene
  • Location AWUE01012155.1 : 40245-42623 : positive

Gene Family Information

  • ID HOM05D004774
  • #Genes/#Species 154/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna3922
  • GenBank OMP09830.1
  • id gene5073
  • gene_name COLO4_05101
  • uniprot A0A1R3KRY5

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
GOA Databasetranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006352
IEA
GOA DatabaseDNA-templated transcription, initiation
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT1G06790
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process AT1G06790

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003899
IEA
GOA DatabaseDNA-directed 5'-3' RNA polymerase activity
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036898 RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 RNA polymerase Rpb7-like
IPR005576 RNA polymerase Rpb7-like , N-terminal
IPR013238 RNA polymerase III, subunit Rpc25
IPR012340 Nucleic acid-binding, OB-fold
Mapman id Description
35.1 not assigned.annotated