Gene: Lj6g0006771

General Information

Structural Information

  • Species Lotus japonicus
  • Gene Identifier Lj6g0006771
  • Transcript Identifier Lj6g0006771.1
  • Gene Type Coding gene
  • Location chr6 : 13200554-13205411 : positive

Gene Family Information

  • ID HOM05D004044
  • #Genes/#Species 173/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lj6g0006771.Lj1.0v1
  • pacid 44933917

Descriptions

  • Description PF00575//PF03876 - S1 RNA binding domain (S1) // SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 (SHS2_Rpb7-N)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0006351
IEA
InterProtranscription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005665
ISO
PLAZA Integrative OrthologyRNA polymerase II, core complex AT5G59180

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003029 S1 domain
IPR036898 RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 RNA polymerase Rpb7-like
IPR005576 RNA polymerase Rpb7-like , N-terminal
IPR012340 Nucleic acid-binding, OB-fold
Mapman id Description
15.1.6.5 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 7