Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01480 Aquilegia oxysepala HOM05D003093 ORTHO05D077548 1.7e-82 309.3 157 100.0
Aqoxy1G01978 Aquilegia oxysepala HOM05D003093 ORTHO05D004301 2.3e-18 96.3 140 50.0
Ah.10g033320 Amaranthus hybridus HOM05D003093 ORTHO05D004301 9.5e-17 90.9 138 46.4
EL10Ac2g03490 Beta vulgaris HOM05D003093 ORTHO05D004301 9.5e-17 90.9 139 46.8
Nn2g10548 Nelumbo nucifera HOM05D003093 ORTHO05D004301 2.8e-16 89.4 139 46.0
ATR0580G275 Amborella trichopoda HOM05D003093 ORTHO05D004301 6.1e-16 88.2 140 45.7
Gohir.A06G177800 Gossypium hirsutum HOM05D003093 ORTHO05D004301 6.1e-16 88.2 137 44.5
Gohir.D06G173600 Gossypium hirsutum HOM05D003093 ORTHO05D004301 6.1e-16 88.2 137 44.5
Gorai.010G203000 Gossypium raimondii HOM05D003093 ORTHO05D004301 6.1e-16 88.2 137 44.5
Eucgr.G02772 Eucalyptus grandis HOM05D003093 ORTHO05D004301 8.0e-16 87.8 138 42.8
Cpa.g.sc1.306 Carica papaya HOM05D003093 ORTHO05D004301 1.4e-15 87.0 136 41.9
Sc06g0001860 Simmondsia chinensis HOM05D003093 ORTHO05D004301 1.4e-15 87.0 138 44.2
Thecc.10G062100 Theobroma cacao HOM05D003093 ORTHO05D004301 1.4e-15 87.0 137 43.8
AUR62025537 Chenopodium quinoa HOM05D003093 ORTHO05D004301 2.3e-15 86.3 139 45.3
MBI05_g32633_MAGBIO Magnolia biondii HOM05D003093 ORTHO05D004301 2.3e-15 86.3 141 45.4
AUR62042671 Chenopodium quinoa HOM05D003093 ORTHO05D004301 3.0e-15 85.9 139 44.6
Duzib114G0430 Durio zibethinus HOM05D003093 ORTHO05D004301 3.0e-15 85.9 153 41.2
Duzib114G0987 Durio zibethinus HOM05D003093 ORTHO05D004301 3.0e-15 85.9 153 41.2
AT1G28060 Arabidopsis thaliana HOM05D003093 ORTHO05D004301 4.0e-15 85.5 159 39.6
TAR623G1133 Trochodendron aralioides HOM05D003093 ORTHO05D004301 6.8e-15 84.7 139 43.9
CDE10G0582 Ceratophyllum demersum HOM05D003093 ORTHO05D004301 8.9e-15 84.3 139 44.6
CDE10G0729 Ceratophyllum demersum HOM05D003093 ORTHO05D004301 1.2e-14 84.0 139 43.9
CSS0040311 Camellia sinensis var. sinensis HOM05D003093 ORTHO05D004301 1.5e-14 83.6 139 43.9
CSS0050146 Camellia sinensis var. sinensis HOM05D003093 ORTHO05D004301 1.5e-14 83.6 139 43.9
PGR142G0268 Punica granatum HOM05D003093 ORTHO05D004301 1.5e-14 83.6 138 42.8
Cfa001556 Carpinus fangiana HOM05D003093 ORTHO05D004301 2.0e-14 83.2 138 41.3
Haze_16975 Corylus avellana HOM05D003093 ORTHO05D004301 2.0e-14 83.2 138 41.3
THA.LOC104827309 Tarenaya hassleriana HOM05D003093 ORTHO05D004301 2.0e-14 83.2 136 43.4
Aa31sc146G40 Aethionema arabicum HOM05D003093 ORTHO05D004301 2.6e-14 82.8 144 41.7
BolC5t31397H Brassica oleracea HOM05D003093 ORTHO05D004301 3.4e-14 82.4 136 41.9
QL08p057653 Quercus lobata HOM05D003093 ORTHO05D004301 3.4e-14 82.4 139 43.2
GSVIVG01032624001 Vitis vinifera HOM05D003093 ORTHO05D004301 3.4e-14 82.4 138 43.5
CiPaw.02G178700 Carya illinoinensis HOM05D003093 ORTHO05D004301 4.4e-14 82.0 138 39.9
COL.COLO4_10868 Corchorus olitorius HOM05D003093 ORTHO05D004301 4.4e-14 82.0 137 43.1
CiPaw.01G280100 Carya illinoinensis HOM05D003093 ORTHO05D004301 5.7e-14 81.6 147 38.1
Hund22429 Selenicereus undatus HOM05D003093 ORTHO05D004301 5.7e-14 81.6 138 41.3
vmacro07110 Vaccinium macrocarpon HOM05D003093 ORTHO05D004301 5.7e-14 81.6 139 42.4
BcaC05g26809 Brassica carinata HOM05D003093 ORTHO05D004301 7.5e-14 81.3 136 42.6
HanXRQChr16g0532861 Helianthus annuus HOM05D003093 ORTHO05D004301 7.5e-14 81.3 138 42.0
PSO541G5925 Papaver somniferum HOM05D003093 ORTHO05D004301 7.5e-14 81.3 138 43.5
Dinv31391 Davidia involucrata HOM05D003093 ORTHO05D004301 9.8e-14 80.9 138 42.0
Rhsim03G0125400 Rhododendron simsii HOM05D003093 ORTHO05D004301 9.8e-14 80.9 139 43.2
BcaC05g26621 Brassica carinata HOM05D003093 ORTHO05D004301 1.3e-13 80.5 136 41.9
A09p38030 Brassica napus HOM05D003093 ORTHO05D004301 1.3e-13 80.5 136 41.9
C05p26730 Brassica napus HOM05D003093 ORTHO05D004301 1.3e-13 80.5 136 41.9
BraA09t39313Z Brassica rapa HOM05D003093 ORTHO05D004301 1.3e-13 80.5 136 41.9
Duzib128G1511 Durio zibethinus HOM05D003093 ORTHO05D004301 1.3e-13 80.5 137 42.3
ECA233G1939 Erigeron canadensis HOM05D003093 ORTHO05D004301 1.7e-13 80.1 138 41.3
HanXRQChr15g0482981 Helianthus annuus HOM05D003093 ORTHO05D004301 1.7e-13 80.1 138 41.3
Hma1.2p1_0207F.1_g087910 Hydrangea macrophylla HOM05D003093 ORTHO05D004301 1.7e-13 80.1 139 41.7
PSO675G6375 Papaver somniferum HOM05D003093 ORTHO05D004301 1.7e-13 80.1 138 42.8
AL1G41570 Arabidopsis lyrata HOM05D003093 ORTHO05D004301 2.2e-13 79.7 136 41.9
A08p25940 Brassica napus HOM05D003093 ORTHO05D004301 2.8e-13 79.3 143 40.6
Lj1A929G70 Lonicera japonica HOM05D003093 ORTHO05D004301 3.7e-13 79.0 139 42.4
Sp1g24240 Schrenkiella parvula HOM05D003093 ORTHO05D004301 4.9e-13 78.6 136 42.6
C03p74710 Brassica napus HOM05D003093 ORTHO05D004301 6.3e-13 78.2 143 40.6
Thhalv10006834m.g Eutrema salsugineum HOM05D003093 ORTHO05D004301 6.3e-13 78.2 136 41.9
CANSAT78G1625 Cannabis sativa HOM05D003093 ORTHO05D004301 8.3e-13 77.8 139 39.6
Ciclev10030694m.g Citrus clementina HOM05D003093 ORTHO05D004301 8.3e-13 77.8 138 41.3
CARHR027510 Cardamine hirsuta HOM05D003093 ORTHO05D004301 1.1e-12 77.4 136 42.6
Carub.0001s2649 Capsella rubella HOM05D003093 ORTHO05D004301 1.4e-12 77.0 136 41.9
Glyma.20G241900 Glycine max HOM05D003093 ORTHO05D004301 1.4e-12 77.0 138 39.9
Medtr1g115920 Medicago truncatula HOM05D003093 ORTHO05D004301 1.4e-12 77.0 138 40.6
BolC3t19719H Brassica oleracea HOM05D003093 ORTHO05D004301 1.8e-12 76.6 143 39.9
VMungo0720G2126 Vigna mungo HOM05D003093 ORTHO05D004301 1.8e-12 76.6 135 40.7
Gorai.011G244700 Gossypium raimondii HOM05D003093 ORTHO05D004301 2.4e-12 76.3 136 41.9
Phvul.007G008300 Phaseolus vulgaris HOM05D003093 ORTHO05D004301 2.4e-12 76.3 138 39.1
RcHm_v2.0_Chr1g0365041 Rosa chinensis HOM05D003093 ORTHO05D004301 2.4e-12 76.3 138 39.1
TWI38G0009 Tripterygium wilfordii HOM05D003093 ORTHO05D004301 2.4e-12 76.3 139 41.0
Actinidia38222 Actinidia chinensis HOM05D003093 ORTHO05D004301 3.1e-12 75.9 138 40.6
Lalb_Chr21g0307191 Lupinus albus HOM05D003093 ORTHO05D004301 3.1e-12 75.9 139 40.3
VMungo0720G2412 Vigna mungo HOM05D003093 ORTHO05D004301 3.1e-12 75.9 138 38.4
Ca_11321_v3 Cicer arietinum L. HOM05D003093 ORTHO05D004301 4.1e-12 75.5 139 41.0
Gohir.A10G209800 Gossypium hirsutum HOM05D003093 ORTHO05D004301 4.1e-12 75.5 136 41.9
TPR.G10418 Trifolium pratense HOM05D003093 ORTHO05D004301 4.1e-12 75.5 138 39.9
Lsat_1_v5_gn_3_65860 Lactuca sativa HOM05D003093 ORTHO05D004301 5.4e-12 75.1 138 39.1
Lalb_Chr02g0143891 Lupinus albus HOM05D003093 ORTHO05D004301 5.4e-12 75.1 139 38.8
Oeu039037.3 Olea europaea HOM05D003093 ORTHO05D004301 5.4e-12 75.1 143 41.3
unitig_32.g10676 Utricularia gibba HOM05D003093 ORTHO05D004301 5.4e-12 75.1 146 38.4
Glyma.11G012500 Glycine max HOM05D003093 ORTHO05D004301 7.0e-12 74.7 139 41.0
Lj5g0014436 Lotus japonicus HOM05D003093 ORTHO05D004301 7.0e-12 74.7 139 41.0
Oeu009484.1 Olea europaea HOM05D003093 ORTHO05D004301 7.0e-12 74.7 139 41.0
Sabra08G0034200 Salix brachista HOM05D003093 ORTHO05D004301 7.0e-12 74.7 138 37.7
FAN03G1537 Fragaria x ananassa HOM05D003093 ORTHO05D004301 1.2e-11 73.9 138 38.4
FAN10G3079 Fragaria x ananassa HOM05D003093 ORTHO05D004301 1.6e-11 73.6 138 38.4
Prupe.2G224900 Prunus persica HOM05D003093 ORTHO05D004301 1.6e-11 73.6 138 39.9
SHI28152 Sapria himalayana HOM05D003093 ORTHO05D000168 1.6e-11 73.6 138 37.7
ECA234G2610 Erigeron canadensis HOM05D003093 ORTHO05D004301 2.0e-11 73.2 138 39.1
SGA_v2.0_scaffold2G01039 Striga asiatica HOM05D003093 ORTHO05D004301 2.0e-11 73.2 140 39.3
FvH4_7g20820 Fragaria vesca HOM05D003093 ORTHO05D004301 2.7e-11 72.8 138 37.7
FAN06G1239 Fragaria x ananassa HOM05D003093 ORTHO05D004301 2.7e-11 72.8 138 37.7
FAN06G3924 Fragaria x ananassa HOM05D003093 ORTHO05D004301 2.7e-11 72.8 138 37.7
Glyma.01G229700 Glycine max HOM05D003093 ORTHO05D004301 2.7e-11 72.8 139 40.3
Phvul.002G037600 Phaseolus vulgaris HOM05D003093 ORTHO05D004301 2.7e-11 72.8 138 39.1
ClCG02G013660 Citrullus lanatus HOM05D003093 ORTHO05D004301 3.5e-11 72.4 138 38.4
Os09g0249600 Oryza sativa ssp. japonica HOM05D003093 ORTHO05D004301 3.5e-11 72.4 139 38.8
SGA_v2.0_scaffold221G42698 Striga asiatica HOM05D003093 ORTHO05D004301 3.5e-11 72.4 138 39.1
TPR.G11535 Trifolium pratense HOM05D003093 ORTHO05D004301 3.5e-11 72.4 138 39.9
Cc02_g08600 Coffea canephora HOM05D003093 ORTHO05D004301 4.5e-11 72.0 139 41.0
FAN01G1115 Fragaria x ananassa HOM05D003093 ORTHO05D004301 4.5e-11 72.0 140 37.9
MD01G1117500 Malus domestica HOM05D003093 ORTHO05D004301 4.5e-11 72.0 137 38.0
Potri.008G048000 Populus trichocarpa HOM05D003093 ORTHO05D004301 4.5e-11 72.0 138 37.7
SEGI_11595 Sequoiadendron giganteum HOM05D003093 ORTHO05D004301 4.5e-11 72.0 140 42.1
SEGI_36215 Sequoiadendron giganteum HOM05D003093 ORTHO05D004301 4.5e-11 72.0 140 42.1
Migut.F00813 Erythranthe guttata HOM05D003093 ORTHO05D004301 5.9e-11 71.6 139 38.1
Medtr4g094355 Medicago truncatula HOM05D003093 ORTHO05D004301 5.9e-11 71.6 137 39.4
Potri.010G213300 Populus trichocarpa HOM05D003093 ORTHO05D004301 5.9e-11 71.6 138 37.0
SEGI_10080 Sequoiadendron giganteum HOM05D003093 ORTHO05D004301 5.9e-11 71.6 140 41.4
Solyc06g036580.4 Solanum lycopersicum HOM05D003093 ORTHO05D004301 5.9e-11 71.6 136 41.9
FvH4_2g04410 Fragaria vesca HOM05D003093 ORTHO05D004301 7.8e-11 71.2 136 38.2
Manes.07G106800 Manihot esculenta HOM05D003093 ORTHO05D004301 7.8e-11 71.2 138 37.7
Peaxi162Scf00015g02612 Petunia axillaris HOM05D003093 ORTHO05D004301 7.8e-11 71.2 138 40.6
unitig_88.g27763 Utricularia gibba HOM05D003093 ORTHO05D004301 1.0e-10 70.9 138 38.4
arahy.Tifrunner.gnm1.ann1.59ZZV8 Arachis hypogaea HOM05D003093 ORTHO05D004301 1.3e-10 70.5 138 39.1
arahy.Tifrunner.gnm1.ann1.YKFK84 Arachis hypogaea HOM05D003093 ORTHO05D004301 1.3e-10 70.5 138 39.1
MD07G1185000 Malus domestica HOM05D003093 ORTHO05D004301 1.3e-10 70.5 137 37.2
Sopen06g008290 Solanum pennellii HOM05D003093 ORTHO05D004301 1.3e-10 70.5 136 41.2
TPR.G27039 Trifolium pratense HOM05D003093 ORTHO05D004301 1.3e-10 70.5 138 38.4
Manes.10G038800 Manihot esculenta HOM05D003093 ORTHO05D004301 1.7e-10 70.1 138 37.7
MELO3C023809.2 Cucumis melo HOM05D003093 ORTHO05D004301 2.9e-10 69.3 137 36.5
Gohir.D10G218100 Gossypium hirsutum HOM05D003093 ORTHO05D004301 2.9e-10 69.3 129 41.9
SalBow3G0936 Salvia bowleyana HOM05D003093 ORTHO05D004301 3.8e-10 68.9 141 38.3
Sed0009358 Sechium edule HOM05D003093 ORTHO05D004301 3.8e-10 68.9 150 34.0
PGSC0003DMG400002376 Solanum tuberosum HOM05D003093 ORTHO05D004301 3.8e-10 68.9 136 40.4
Sed0012201 Sechium edule HOM05D003093 ORTHO05D004301 5.0e-10 68.6 137 36.5
CsaV3_5G006530 Cucumis sativus L. HOM05D003093 ORTHO05D004301 6.6e-10 68.2 137 35.8
SalBow8G1202 Salvia bowleyana HOM05D003093 ORTHO05D004301 8.6e-10 67.8 141 38.3
Sabra10G0165100 Salix brachista HOM05D003093 ORTHO05D004301 1.1e-09 67.4 138 34.8
CAN.G546.16 Capsicum annuum HOM05D003093 ORTHO05D004301 5.6e-09 65.1 136 38.2
Rhsim09G0156000 Rhododendron simsii HOM05D003093 ORTHO05D004301 9.5e-09 64.3 133 37.6
Zm00001eb238080 Zea mays HOM05D003093 ORTHO05D004301 9.5e-09 64.3 139 37.4
Zm00001eb204030 Zea mays HOM05D003093 ORTHO05D004301 1.2e-08 63.9 140 37.9
Psat6g163840 Pisum sativum HOM05D003093 ORTHO05D004301 1.6e-08 63.5 101 44.6
Atru.chr12.588 Acer truncatum HOM05D003093 ORTHO05D004301 2.8e-08 62.8 108 39.8
Mapoly0014s0207 Marchantia polymorpha HOM05D003093 ORTHO05D004301 4.7e-08 62.0 139 35.3
Solyc05g054880.3 Solanum lycopersicum HOM05D003093 ORTHO05D004301 1.0e-07 60.8 138 35.5
Sopen05g033340 Solanum pennellii HOM05D003093 ORTHO05D004301 1.0e-07 60.8 138 35.5
PGSC0003DMG400023507 Solanum tuberosum HOM05D003093 ORTHO05D004301 1.0e-07 60.8 138 35.5
TPR.G27107 Trifolium pratense HOM05D003093 ORTHO05D004301 1.8e-07 60.1 142 38.7
Pp3c14_26820 Physcomitrium patens HOM05D003093 ORTHO05D004301 4.0e-07 58.9 139 33.8
HPP92_019592 Vanilla planifolia HOM05D003093 ORTHO05D004301 5.2e-07 58.5 129 36.4
TPR.G30178 Trifolium pratense HOM05D003093 ORTHO05D004301 8.9e-07 57.8 146 35.6
AagrBONN_evm.TU.Sc2ySwM_117.140 Anthoceros agrestis HOM05D003093 ORTHO05D004301 1.2e-06 57.4 140 33.6


User provided reference genes

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