Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01573 Aquilegia oxysepala HOM05D005334 ORTHO05D006560 6.5e-199 697.2 352 100.0
TAR625G0036 Trochodendron aralioides HOM05D005334 ORTHO05D006560 9.8e-147 523.9 341 75.4
PSO700G0130 Papaver somniferum HOM05D005334 ORTHO05D006560 2.0e-144 516.2 357 74.5
Hma1.2p1_0964F.1_g242010 Hydrangea macrophylla HOM05D005334 ORTHO05D006560 1.0e-143 513.8 372 71.2
Nn5g29815 Nelumbo nucifera HOM05D005334 ORTHO05D006560 6.6e-143 511.1 356 72.8
RcHm_v2.0_Chr6g0270401 Rosa chinensis HOM05D005334 ORTHO05D006560 1.5e-142 510.0 356 72.2
PSO832G1169 Papaver somniferum HOM05D005334 ORTHO05D006560 2.5e-142 509.2 356 74.2
Thecc.10G018300 Theobroma cacao HOM05D005334 ORTHO05D006560 2.5e-142 509.2 356 73.3
FAN26G1496 Fragaria x ananassa HOM05D005334 ORTHO05D006560 4.3e-142 508.4 356 72.2
Actinidia05483 Actinidia chinensis HOM05D005334 ORTHO05D006560 5.6e-142 508.1 356 71.6
CANSAT01G0836 Cannabis sativa HOM05D005334 ORTHO05D006560 7.3e-142 507.7 356 71.6
RcHm_v2.0_Chr6g0270301 Rosa chinensis HOM05D005334 ORTHO05D006560 1.6e-141 506.5 356 71.6
GSVIVG01003946001 Vitis vinifera HOM05D005334 ORTHO05D006560 4.7e-141 505.0 359 71.9
FvH4_7g07230 Fragaria vesca HOM05D005334 ORTHO05D006560 8.0e-141 504.2 356 71.6
FvH4_1g19290 Fragaria vesca HOM05D005334 ORTHO05D006560 2.3e-140 502.7 356 71.9
PSO761G0425 Papaver somniferum HOM05D005334 ORTHO05D006560 2.3e-140 502.7 358 73.2
FAN23G0357 Fragaria x ananassa HOM05D005334 ORTHO05D006560 6.8e-140 501.1 356 71.6
FAN23G0783 Fragaria x ananassa HOM05D005334 ORTHO05D006560 6.8e-140 501.1 356 71.6
Potri.010G189500 Populus trichocarpa HOM05D005334 ORTHO05D006560 8.9e-140 500.7 357 70.0
Rhsim04G0113300 Rhododendron simsii HOM05D005334 ORTHO05D006560 2.0e-139 499.6 356 71.6
QL06p036434 Quercus lobata HOM05D005334 ORTHO05D006560 4.4e-139 498.4 347 72.3
Cfa006855 Carpinus fangiana HOM05D005334 ORTHO05D006560 1.7e-138 496.5 356 70.5
Sed0026061 Sechium edule HOM05D005334 ORTHO05D006560 2.2e-138 496.1 349 71.6
CiPaw.07G045200 Carya illinoinensis HOM05D005334 ORTHO05D006560 3.7e-138 495.4 348 71.6
Haze_03908 Corylus avellana HOM05D005334 ORTHO05D006560 4.9e-138 495.0 347 71.2
Peaxi162Scf00085g00115 Petunia axillaris HOM05D005334 ORTHO05D006560 6.4e-138 494.6 356 70.5
CsaV3_6G044840 Cucumis sativus L. HOM05D005334 ORTHO05D006560 2.4e-137 492.7 356 69.9
Prupe.1G076500 Prunus persica HOM05D005334 ORTHO05D006560 4.1e-137 491.9 356 68.8
MELO3C007703.2 Cucumis melo HOM05D005334 ORTHO05D006560 5.4e-137 491.5 359 69.9
TWI34G1275 Tripterygium wilfordii HOM05D005334 ORTHO05D006560 7.0e-137 491.1 347 70.9
ClCG01G018260 Citrullus lanatus HOM05D005334 ORTHO05D006560 1.2e-136 490.3 347 70.9
MD01G1042400 Malus domestica HOM05D005334 ORTHO05D006560 2.7e-136 489.2 356 69.1
Gohir.D12G076300 Gossypium hirsutum HOM05D005334 ORTHO05D006560 3.5e-136 488.8 356 69.9
Nitab4.5_0000402g0140 Nicotiana tabacum HOM05D005334 ORTHO05D006560 3.5e-136 488.8 356 69.9
Duzib128G0185 Durio zibethinus HOM05D005334 ORTHO05D006560 1.0e-135 487.3 366 69.7
Gorai.008G084700 Gossypium raimondii HOM05D005334 ORTHO05D006560 3.0e-135 485.7 356 69.9
Ciclev10008278m.g Citrus clementina HOM05D005334 ORTHO05D006560 3.9e-135 485.3 357 70.3
vmacro09003 Vaccinium macrocarpon HOM05D005334 ORTHO05D006560 3.9e-135 485.3 347 70.9
Eucgr.A00094 Eucalyptus grandis HOM05D005334 ORTHO05D006560 6.6e-135 484.6 356 69.7
Sopen11g005690 Solanum pennellii HOM05D005334 ORTHO05D006560 6.6e-135 484.6 355 69.0
CAN.G1813.2 Capsicum annuum HOM05D005334 ORTHO05D006560 8.6e-135 484.2 356 69.1
CiPaw.07G045000 Carya illinoinensis HOM05D005334 ORTHO05D006560 1.5e-134 483.4 348 71.0
PGSC0003DMG400016186 Solanum tuberosum HOM05D005334 ORTHO05D006560 1.5e-134 483.4 355 69.0
Solyc11g010950.2 Solanum lycopersicum HOM05D005334 ORTHO05D006560 9.5e-134 480.7 355 68.5
Sabra10G0146100 Salix brachista HOM05D005334 ORTHO05D006560 4.7e-133 478.4 376 65.4
ECA233G4415 Erigeron canadensis HOM05D005334 ORTHO05D006560 1.4e-132 476.9 357 69.2
CSS0002721 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 1.7e-130 469.9 329 70.2
Ciclev10008715m.g Citrus clementina HOM05D005334 ORTHO05D006560 4.9e-130 468.4 351 69.5
SGA_v2.0_scaffold45G17221 Striga asiatica HOM05D005334 ORTHO05D006560 1.1e-129 467.2 356 67.7
Cc07_g13790 Coffea canephora HOM05D005334 ORTHO05D006560 1.4e-129 466.8 348 68.4
Manes.10G013400 Manihot esculenta HOM05D005334 ORTHO05D006560 3.2e-129 465.7 356 68.0
PGR031G2068 Punica granatum HOM05D005334 ORTHO05D006560 3.2e-129 465.7 362 66.0
arahy.Tifrunner.gnm1.ann1.DY9T0P Arachis hypogaea HOM05D005334 ORTHO05D006560 7.8e-128 461.1 357 67.2
Ca_14799_v3 Cicer arietinum L. HOM05D005334 ORTHO05D006560 1.7e-127 459.9 358 66.8
Lj3g0001207 Lotus japonicus HOM05D005334 ORTHO05D006560 1.7e-127 459.9 357 66.7
HanXRQChr08g0226671 Helianthus annuus HOM05D005334 ORTHO05D006560 2.3e-127 459.5 352 66.5
arahy.Tifrunner.gnm1.ann1.D5QNLH Arachis hypogaea HOM05D005334 ORTHO05D006560 3.0e-127 459.1 357 66.9
PSO013G0112 Papaver somniferum HOM05D005334 ORTHO05D006560 1.5e-126 456.8 320 73.8
Sc03g0000510 Simmondsia chinensis HOM05D005334 ORTHO05D006560 1.5e-126 456.8 357 67.2
Phvul.010G046100 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 2.5e-126 456.1 357 66.7
Glyma.13G008300 Glycine max HOM05D005334 ORTHO05D006560 4.3e-126 455.3 357 67.5
Medtr8g007340 Medicago truncatula HOM05D005334 ORTHO05D006560 1.2e-125 453.8 357 65.3
Phvul.010G045900 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 2.1e-125 453.0 357 66.4
MSTRG.3723 Avicennia marina HOM05D005334 ORTHO05D006560 1.4e-124 450.3 357 64.4
Psat4g223080 Pisum sativum HOM05D005334 ORTHO05D006560 4.0e-124 448.7 358 65.4
VMungo0331G1245 Vigna mungo HOM05D005334 ORTHO05D006560 4.0e-124 448.7 357 65.3
SalBow5G3116 Salvia bowleyana HOM05D005334 ORTHO05D006560 5.2e-124 448.4 349 65.0
AUR62003692 Chenopodium quinoa HOM05D005334 ORTHO05D006560 8.9e-124 447.6 365 65.5
SalBow5G4670 Salvia bowleyana HOM05D005334 ORTHO05D006560 2.6e-123 446.0 349 64.8
FAN19G2596 Fragaria x ananassa HOM05D005334 ORTHO05D006560 3.4e-123 445.7 356 66.6
AUR62018003 Chenopodium quinoa HOM05D005334 ORTHO05D006560 1.3e-122 443.7 386 62.2
Os06g0639600 Oryza sativa ssp. japonica HOM05D005334 ORTHO05D006560 1.9e-121 439.9 366 61.7
COL.COLO4_25710 Corchorus olitorius HOM05D005334 ORTHO05D006560 1.6e-120 436.8 307 70.0
Lalb_Chr12g0210501 Lupinus albus HOM05D005334 ORTHO05D006560 2.7e-120 436.0 356 64.9
AT3G11220 Arabidopsis thaliana HOM05D005334 ORTHO05D006560 3.5e-120 435.6 354 63.6
Thhalv10021017m.g Eutrema salsugineum HOM05D005334 ORTHO05D006560 3.5e-120 435.6 356 63.5
Lj2C525G9 Lonicera japonica HOM05D005334 ORTHO05D006560 2.3e-119 433.0 357 64.1
Carub.0003s1053 Capsella rubella HOM05D005334 ORTHO05D006560 6.6e-119 431.4 357 63.6
CARHR085780 Cardamine hirsuta HOM05D005334 ORTHO05D006560 8.6e-119 431.0 356 62.6
CiPaw.07G049700 Carya illinoinensis HOM05D005334 ORTHO05D006560 1.5e-118 430.3 348 64.7
Sp3g09500 Schrenkiella parvula HOM05D005334 ORTHO05D006560 2.5e-118 429.5 356 62.4
Aa31LG3G4530 Aethionema arabicum HOM05D005334 ORTHO05D006560 3.3e-118 429.1 354 63.6
Migut.K00814 Erythranthe guttata HOM05D005334 ORTHO05D006560 4.3e-118 428.7 357 63.3
CiPaw.07G044700 Carya illinoinensis HOM05D005334 ORTHO05D006560 1.6e-117 426.8 351 64.4
BcaC05g29390 Brassica carinata HOM05D005334 ORTHO05D006560 4.7e-117 425.2 357 62.7
A05p38080 Brassica napus HOM05D005334 ORTHO05D006560 1.4e-116 423.7 358 62.8
AL3G22740 Arabidopsis lyrata HOM05D005334 ORTHO05D006560 8.9e-116 421.0 361 61.5
C05p56870 Brassica napus HOM05D005334 ORTHO05D006560 1.2e-115 420.6 358 62.6
BraA05t22600Z Brassica rapa HOM05D005334 ORTHO05D006560 1.2e-115 420.6 358 62.3
Zm00001eb387250 Zea mays HOM05D005334 ORTHO05D006560 2.6e-115 419.5 365 59.5
Cpa.g.sc19.179 Carica papaya HOM05D005334 ORTHO05D006560 2.2e-114 416.4 356 63.5
THA.LOC104816551 Tarenaya hassleriana HOM05D005334 ORTHO05D006560 1.9e-113 413.3 356 60.1
BolC5t34351H Brassica oleracea HOM05D005334 ORTHO05D006560 4.2e-113 412.1 383 58.5
Atru.chr12.1050 Acer truncatum HOM05D005334 ORTHO05D006560 2.7e-112 409.5 331 65.3
MBI10_g34777_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 1.7e-111 406.8 332 64.5
CDE04G2384 Ceratophyllum demersum HOM05D005334 ORTHO05D006560 3.3e-110 402.5 364 60.7
Lsat_1_v5_gn_6_15620 Lactuca sativa HOM05D005334 ORTHO05D006560 3.8e-106 389.0 356 60.1
unitig_0.g2648 Utricularia gibba HOM05D005334 ORTHO05D006560 4.9e-106 388.7 362 56.4
Ah.02g123390 Amaranthus hybridus HOM05D005334 ORTHO05D006560 8.4e-106 387.9 356 60.7
Dinv36960 Davidia involucrata HOM05D005334 ORTHO05D006560 3.9e-103 379.0 269 71.0
SEGI_17743 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 3.9e-103 379.0 381 51.4
Glyma.03G108600 Glycine max HOM05D005334 ORTHO05D006560 8.7e-103 377.9 295 66.8
Hund14075 Selenicereus undatus HOM05D005334 ORTHO05D006560 4.5e-99 365.5 356 56.7
SHI03443 Sapria himalayana HOM05D005334 ORTHO05D006560 2.1e-96 356.7 344 55.8
ATR1153G009 Amborella trichopoda HOM05D005334 ORTHO05D006560 1.3e-95 354.0 305 59.0
FAN03G2380 Fragaria x ananassa HOM05D005334 ORTHO05D006560 2.3e-95 353.2 370 55.9
Mapoly0006s0234 Marchantia polymorpha HOM05D005334 ORTHO05D006560 3.0e-87 326.2 369 46.1
Gohir.A12G078265 Gossypium hirsutum HOM05D005334 ORTHO05D006560 1.5e-86 323.9 245 68.6
Pp3c9_23940 Physcomitrium patens HOM05D005334 ORTHO05D006560 9.0e-84 314.7 357 48.2
AagrBONN_evm.TU.Sc2ySwM_117.1770 Anthoceros agrestis HOM05D005334 ORTHO05D006560 2.2e-77 293.5 379 44.1
Thecc.09G278800 Theobroma cacao HOM05D005334 ORTHO05D006560 1.6e-72 277.3 270 55.2
Dinv27014 Davidia involucrata HOM05D005334 ORTHO05D006560 2.7e-72 276.6 215 66.0
DCAR_003438 Daucus carota HOM05D005334 ORTHO05D006560 3.4e-67 259.6 300 50.3
Prupe.6G206700 Prunus persica HOM05D005334 ORTHO05D006560 5.0e-66 255.8 356 45.2
Lsat_1_v5_gn_4_105120 Lactuca sativa HOM05D005334 ORTHO05D006560 3.1e-60 236.5 205 59.5
TPR.G5292 Trifolium pratense HOM05D005334 ORTHO05D006560 1.6e-59 234.2 173 69.4
Lj2g0000099 Lotus japonicus HOM05D005334 ORTHO05D006560 5.5e-57 225.7 167 68.9
Lj6g0009802 Lotus japonicus HOM05D005334 ORTHO05D006560 4.0e-55 219.5 190 61.6
BcaB06g25638 Brassica carinata HOM05D005334 ORTHO05D006560 9.7e-54 214.9 182 63.7
TPR.G11130 Trifolium pratense HOM05D005334 ORTHO05D006560 1.1e-52 211.5 187 58.8
Lsat_1_v5_gn_8_12861 Lactuca sativa HOM05D005334 ORTHO05D006560 1.4e-52 211.1 153 68.6
CSS0046374 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 3.0e-47 193.4 118 79.7
CSS0016906 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 7.5e-46 188.7 118 78.0
CiPaw.07G044400 Carya illinoinensis HOM05D005334 ORTHO05D006560 4.8e-45 186.0 138 68.8
SMO146G0066 Selaginella moellendorffii HOM05D005334 ORTHO05D006560 7.0e-44 182.2 251 43.4
Lsat_1_v5_gn_5_29040 Lactuca sativa HOM05D005334 ORTHO05D006560 1.0e-42 178.3 192 50.5
RcHm_v2.0_Chr2g0110581 Rosa chinensis HOM05D005334 ORTHO05D006560 1.0e-42 178.3 301 39.2
Lsat_1_v5_gn_4_67481 Lactuca sativa HOM05D005334 ORTHO05D006560 2.1e-40 170.6 184 52.2
CSS0017464 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 1.4e-36 157.9 118 69.5
ATR0022G031 Amborella trichopoda HOM05D005334 ORTHO05D006560 2.0e-35 154.1 132 60.6
MD01G1042700 Malus domestica HOM05D005334 ORTHO05D006560 2.0e-35 154.1 165 52.7
Lsat_1_v5_gn_1_79261 Lactuca sativa HOM05D005334 ORTHO05D006560 3.6e-32 143.3 184 46.7
SEGI_40300 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 2.0e-30 137.5 199 39.7
HPP92_008022 Vanilla planifolia HOM05D005334 ORTHO05D006560 2.2e-29 134.0 114 57.9
CSS0026696 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 5.0e-26 122.9 79 74.7
MBI03_g45376_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 1.1e-25 121.7 84 71.4
HPP92_008021 Vanilla planifolia HOM05D005334 ORTHO05D006560 1.0e-23 115.2 71 78.9
MBI03_g46739_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 3.7e-21 106.7 77 64.9
CBR_g30786 Chara braunii HOM05D000019 ORTHO05D000002 7.5e-14 82.4 129 37.2
Cre03.g196000 Chlamydomonas reinhardtii HOM05D005334 ORTHO05D006560 2.4e-12 77.4 123 37.4


User provided reference genes

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