Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G04311 Aquilegia oxysepala HOM05D005626 ORTHO05D007372 2.4e-301 1038.5 711 100.0
TAR375G0360 Trochodendron aralioides HOM05D005626 ORTHO05D007372 7.1e-120 435.6 580 67.2
MBI07_g24765_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 1.4e-115 421.4 572 52.8
Nn1g00302 Nelumbo nucifera HOM05D005626 ORTHO05D007372 4.9e-113 412.9 572 67.3
GSVIVG01038569001 Vitis vinifera HOM05D005626 ORTHO05D007372 1.1e-109 401.7 557 63.4
QL09p007984 Quercus lobata HOM05D005626 ORTHO05D007372 8.1e-100 369.0 580 61.6
Cfa016215 Carpinus fangiana HOM05D005626 ORTHO05D007372 4.0e-99 366.7 577 56.0
CiPaw.06G045100 Carya illinoinensis HOM05D005626 ORTHO05D007372 6.9e-99 365.9 574 62.4
Manes.06G012351 Manihot esculenta HOM05D005626 ORTHO05D007372 2.9e-97 360.5 541 50.5
Actinidia18659 Actinidia chinensis HOM05D005626 ORTHO05D007372 8.4e-97 359.0 583 55.7
Thecc.03G201200 Theobroma cacao HOM05D005626 ORTHO05D007372 2.7e-95 354.0 583 59.5
Atru.chr12.2245_Atru.chr12.2244 Acer truncatum HOM05D005626 ORTHO05D007372 4.6e-95 353.2 514 54.1
Migut.F00199 Erythranthe guttata HOM05D005626 ORTHO05D007372 2.3e-94 350.9 581 46.8
CANSAT21G0821 Cannabis sativa HOM05D005626 ORTHO05D007372 1.5e-93 348.2 574 49.0
Dinv29256 Davidia involucrata HOM05D005626 ORTHO05D007372 2.5e-93 347.4 582 52.7
EL10Ac3g05260 Beta vulgaris HOM05D005626 ORTHO05D007372 3.3e-93 347.1 545 56.7
MD01G1222800 Malus domestica HOM05D005626 ORTHO05D007372 6.3e-92 342.8 581 58.9
Prupe.2G313200 Prunus persica HOM05D005626 ORTHO05D007372 2.0e-90 337.8 581 55.6
Eucgr.A01448 Eucalyptus grandis HOM05D005626 ORTHO05D007372 6.5e-89 332.8 490 56.7
Ah.07g205460 Amaranthus hybridus HOM05D005626 ORTHO05D007372 8.5e-89 332.4 582 57.2
Ciclev10020013m.g Citrus clementina HOM05D005626 ORTHO05D007372 8.5e-89 332.4 472 65.9
Gohir.D09G179900 Gossypium hirsutum HOM05D005626 ORTHO05D007372 1.2e-87 328.6 497 61.2
THA.LOC104799967 Tarenaya hassleriana HOM05D005626 ORTHO05D007372 1.2e-87 328.6 532 54.3
Hund11648 Selenicereus undatus HOM05D005626 ORTHO05D007372 2.1e-87 327.8 545 55.0
AUR62035551 Chenopodium quinoa HOM05D005626 ORTHO05D007372 1.0e-86 325.5 593 47.7
Duzib084G0104 Durio zibethinus HOM05D005626 ORTHO05D007372 3.0e-86 323.9 582 59.8
AUR62006074 Chenopodium quinoa HOM05D005626 ORTHO05D007372 6.7e-86 322.8 565 52.4
arahy.Tifrunner.gnm1.ann1.ULB6CG Arachis hypogaea HOM05D005626 ORTHO05D007372 1.1e-85 322.0 584 51.7
Hma1.2p1_2307F.1_g319430 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 1.1e-85 322.0 581 60.1
PSO063G0511 Papaver somniferum HOM05D005626 ORTHO05D007372 1.1e-85 322.0 528 55.9
Hma1.2p1_0591F.1_g185250 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 3.3e-85 320.5 568 59.9
Gorai.006G201900 Gossypium raimondii HOM05D005626 ORTHO05D007372 2.8e-84 317.4 529 56.3
CDE02G3804 Ceratophyllum demersum HOM05D005626 ORTHO05D007372 8.2e-84 315.8 468 51.9
PSO170G4344 Papaver somniferum HOM05D005626 ORTHO05D007372 8.2e-84 315.8 577 53.2
Lj1g0019302 Lotus japonicus HOM05D005626 ORTHO05D007372 1.4e-83 315.1 577 55.3
CSS0044766 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 5.3e-83 313.2 552 53.4
Potri.015G010800 Populus trichocarpa HOM05D005626 ORTHO05D007372 4.5e-82 310.1 581 51.6
arahy.Tifrunner.gnm1.ann1.DCMH6Q Arachis hypogaea HOM05D005626 ORTHO05D007372 9.4e-80 302.4 455 60.7
COL.COLO4_16792 Corchorus olitorius HOM05D005626 ORTHO05D007032 9.4e-80 302.4 561 57.8
MSTRG.27018 Avicennia marina HOM05D005626 ORTHO05D007372 1.2e-79 302.0 455 62.4
Cpa.g.sc3.101 Carica papaya HOM05D005626 ORTHO05D007372 1.8e-78 298.1 542 59.2
PGR042G1168 Punica granatum HOM05D005626 ORTHO05D007372 3.9e-78 297.0 490 59.6
Lsat_1_v5_gn_9_49841 Lactuca sativa HOM05D005626 ORTHO05D007372 1.1e-77 295.4 541 57.5
Sopen03g022800 Solanum pennellii HOM05D005626 ORTHO05D007372 1.5e-77 295.0 536 43.1
TWI39G0896 Tripterygium wilfordii HOM05D005626 ORTHO05D007372 3.3e-77 293.9 542 56.5
Solyc03g082990.3 Solanum lycopersicum HOM05D005626 ORTHO05D007372 7.4e-77 292.7 536 42.9
FvH4_7g31990 Fragaria vesca HOM05D005626 ORTHO05D007372 9.7e-77 292.4 489 60.3
CSS0003989 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.3e-76 292.0 652 39.3
FAN06G4319 Fragaria x ananassa HOM05D005626 ORTHO05D007372 2.8e-76 290.8 599 53.3
arahy.Tifrunner.gnm1.ann1.CHU3M4 Arachis hypogaea HOM05D005626 ORTHO05D007372 3.7e-76 290.4 472 57.8
Cc02_g01370 Coffea canephora HOM05D005626 ORTHO05D007372 3.7e-76 290.4 533 39.2
Nitab4.5_0005491g0050 Nicotiana tabacum HOM05D005626 ORTHO05D007372 6.3e-76 289.7 533 43.3
TPR.G33639 Trifolium pratense HOM05D005626 ORTHO05D007372 6.3e-76 289.7 546 52.7
RcHm_v2.0_Chr1g0381501 Rosa chinensis HOM05D005626 ORTHO05D007372 3.1e-75 287.3 488 58.6
Sed0007830 Sechium edule HOM05D005626 ORTHO05D007372 3.1e-75 287.3 579 55.1
Sabra15G0008900 Salix brachista HOM05D005626 ORTHO05D007372 6.9e-75 286.2 488 55.9
Peaxi162Scf00740g00226 Petunia axillaris HOM05D005626 ORTHO05D007372 2.0e-74 284.6 480 47.3
CAN.G481.28 Capsicum annuum HOM05D005626 ORTHO05D007372 5.9e-74 283.1 557 41.1
Lalb_Chr08g0240121 Lupinus albus HOM05D005626 ORTHO05D007372 6.5e-73 279.6 470 58.3
VMungo1309G2515 Vigna mungo HOM05D005626 ORTHO05D007372 8.5e-73 279.3 488 60.5
Sc25g0000940 Simmondsia chinensis HOM05D005626 ORTHO05D007372 1.1e-72 278.9 425 61.4
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 4.2e-72 276.9 584 43.3
AT5G53080 Arabidopsis thaliana HOM05D005626 ORTHO05D007372 1.2e-71 275.4 527 57.5
Oeu010695.1 Olea europaea HOM05D005626 ORTHO05D007372 1.6e-71 275.0 527 44.6
Glyma.04G234300 Glycine max HOM05D005626 ORTHO05D007372 1.4e-70 271.9 547 56.9
Thhalv10013148m.g Eutrema salsugineum HOM05D005626 ORTHO05D007372 3.9e-70 270.4 472 63.3
Sp6g15250 Schrenkiella parvula HOM05D005626 ORTHO05D007372 5.2e-70 270.0 477 63.7
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 6.7e-70 269.6 476 61.6
BraA02t06193Z Brassica rapa HOM05D005626 ORTHO05D007372 8.8e-70 269.2 497 62.4
Carub.0008s1328 Capsella rubella HOM05D005626 ORTHO05D007372 2.6e-69 267.7 474 62.7
A02p11310 Brassica napus HOM05D005626 ORTHO05D007372 3.3e-69 267.3 497 62.2
CsaV3_5G000430 Cucumis sativus L. HOM05D005626 ORTHO05D007372 3.3e-69 267.3 536 50.9
CARHR266100 Cardamine hirsuta HOM05D005626 ORTHO05D007372 5.7e-69 266.5 572 55.2
BolC2t08014H Brassica oleracea HOM05D005626 ORTHO05D007372 7.4e-69 266.2 470 63.6
ECA232G0910 Erigeron canadensis HOM05D005626 ORTHO05D007372 9.7e-69 265.8 516 58.3
Haze_00226 Corylus avellana HOM05D005626 ORTHO05D007372 1.3e-68 265.4 524 52.9
HanXRQChr15g0485681 Helianthus annuus HOM05D005626 ORTHO05D007372 1.7e-68 265.0 596 54.7
C02p18690 Brassica napus HOM05D005626 ORTHO05D007372 2.8e-68 264.2 476 63.0
Ca_16720_v3 Cicer arietinum L. HOM05D005626 ORTHO05D007372 1.1e-67 262.3 528 54.5
Phvul.009G051300 Phaseolus vulgaris HOM05D005626 ORTHO05D007372 1.4e-67 261.9 529 55.8
unitig_92.g28249 Utricularia gibba HOM05D005626 ORTHO05D007372 1.4e-67 261.9 473 45.7
ClCG01G000360 Citrullus lanatus HOM05D005626 ORTHO05D007372 5.3e-67 260.0 555 50.3
AL8G27710 Arabidopsis lyrata HOM05D005626 ORTHO05D007372 1.6e-66 258.5 479 61.8
QL09p008055 Quercus lobata HOM05D005626 ORTHO05D007372 1.3e-65 255.4 501 45.3
BcaC03g14458 Brassica carinata HOM05D005626 ORTHO05D007372 5.0e-65 253.4 505 60.6
MBI07_g43862_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 3.2e-64 250.8 480 37.7
FAN10G2571 Fragaria x ananassa HOM05D005626 ORTHO05D007372 3.6e-63 247.3 570 47.4
MELO3C005892.2 Cucumis melo HOM05D005626 ORTHO05D007372 5.7e-61 240.0 475 53.1
Lj8A623T21 Lonicera japonica HOM05D005626 ORTHO05D007372 5.7e-61 240.0 483 50.5
Manes.06G011400 Manihot esculenta HOM05D005626 ORTHO05D007372 3.7e-60 237.3 432 50.7
Psat5g076080 Pisum sativum HOM05D005626 ORTHO05D007372 3.7e-60 237.3 527 51.8
arahy.Tifrunner.gnm1.ann1.1DU7LF Arachis hypogaea HOM05D005626 ORTHO05D007372 3.1e-59 234.2 482 38.4
BcaB05g22007 Brassica carinata HOM05D005626 ORTHO05D007372 9.1e-59 232.6 546 49.1
Medtr3g091780 Medicago truncatula HOM05D005626 ORTHO05D007372 9.1e-59 232.6 526 53.2
HPP92_005288 Vanilla planifolia HOM05D005626 ORTHO05D007372 5.5e-56 223.4 354 47.7
ATR0730G125 Amborella trichopoda HOM05D005626 ORTHO05D007372 8.0e-55 219.5 334 60.5
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 1.3e-52 212.2 445 57.3
BcaB05g22010 Brassica carinata HOM05D005626 ORTHO05D007372 1.1e-48 199.1 515 34.6
SalBow4G1489 Salvia bowleyana HOM05D005626 ORTHO05D007372 1.8e-46 191.8 539 31.0
CSS0000100 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 4.4e-45 187.2 604 28.3
Gohir.A09G185000 Gossypium hirsutum HOM05D005626 ORTHO05D007372 5.7e-45 186.8 286 57.3
DCAR_010593 Daucus carota HOM05D005626 ORTHO05D007372 9.2e-43 179.5 202 47.0
PGSC0003DMG400018528 Solanum tuberosum HOM05D005626 ORTHO05D007372 2.7e-42 177.9 211 48.8
FAN10G0040 Fragaria x ananassa HOM05D005626 ORTHO05D009683 8.0e-39 166.4 498 39.0
Manes.06G012101 Manihot esculenta HOM05D005626 ORTHO05D007372 4.9e-36 157.1 194 44.8
Mapoly0045s0029 Marchantia polymorpha HOM05D005626 ORTHO05D007372 3.5e-34 151.0 333 49.5
MBI19_g14786_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 3.0e-33 147.9 125 60.0
MBI19_g14787_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 2.6e-29 134.8 88 72.7
BcaB01g04214 Brassica carinata HOM05D005626 ORTHO05D007372 5.6e-24 117.1 156 42.9
Lj1A1021T49 Lonicera japonica HOM05D005626 ORTHO05D007372 7.3e-24 116.7 244 32.8
Pp3c5_16230 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.8e-22 112.1 328 30.8
Mapoly0001s0084 Marchantia polymorpha HOM05D005626 ORTHO05D007372 2.3e-22 111.7 460 27.2
Manes.06G011750 Manihot esculenta HOM05D005626 ORTHO05D007372 6.8e-22 110.2 77 63.6
Glyma.06G130333 Glycine max HOM05D005626 ORTHO05D007372 1.3e-20 105.9 113 44.2
Lj1C1019T10 Lonicera japonica HOM05D005626 ORTHO05D007372 6.4e-20 103.6 83 61.4
MD07G1293400 Malus domestica HOM05D005626 ORTHO05D007372 5.1e-17 94.0 72 65.3
BcaB01g04215 Brassica carinata HOM05D005626 ORTHO05D007372 3.3e-16 91.3 151 34.4
AagrBONN_evm.TU.Sc2ySwM_369.443 Anthoceros agrestis HOM05D005626 ORTHO05D007372 9.5e-16 89.7 161 30.4
Pp3c5_16240 Physcomitrium patens HOM05D005626 ORTHO05D007372 2.8e-15 88.2 320 45.6
CSS0006573 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.1e-14 86.3 85 49.4
Pp3c23_14930 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.4e-11 75.9 143 32.2
Pp3c16_9300 Physcomitrium patens HOM05D005626 ORTHO05D007372 4.1e-11 74.3 134 31.3
Glyma.06G130267 Glycine max HOM05D005626 ORTHO05D007372 1.6e-10 72.4 115 36.5
Pp3c8_12740 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.6e-10 72.4 135 30.4
Actinidia06140 Actinidia chinensis HOM05D005626 ORTHO05D007372 3.9e-09 67.8 60 55.0
FAN10G4199 Fragaria x ananassa HOM05D005626 ORTHO05D007372 3.9e-09 67.8 92 42.4
Lj1A1021T50 Lonicera japonica HOM05D005626 ORTHO05D007372 8.6e-09 66.6 160 30.6
QL09p008114 Quercus lobata HOM05D005626 ORTHO05D007372 1.1e-08 66.2 58 53.4
SEGI_36936 Sequoiadendron giganteum HOM05D005626 ORTHO05D007372 2.1e-07 62.0 51 52.9
Cfa019813 Carpinus fangiana HOM05D005626 ORTHO05D007372 6.2e-07 60.5 43 67.4
QL09p008133 Quercus lobata HOM05D005626 ORTHO05D007372 8.1e-07 60.1 39 71.8


User provided reference genes

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