Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00868 Aquilegia oxysepala HOM05D004330 ORTHO05D005182 0.0e+00 1365.1 708 100.0
Nn6g32085 Nelumbo nucifera HOM05D004330 ORTHO05D005182 0.0e+00 1221.5 708 87.3
GSVIVG01012102001 Vitis vinifera HOM05D004330 ORTHO05D005182 0.0e+00 1213.7 708 86.2
Aqoxy2G00735 Aquilegia oxysepala HOM05D004330 ORTHO05D005182 0.0e+00 1209.1 708 88.0
Actinidia16901 Actinidia chinensis HOM05D004330 ORTHO05D005182 0.0e+00 1206.4 708 86.3
Dinv22060 Davidia involucrata HOM05D004330 ORTHO05D005182 0.0e+00 1204.1 708 86.4
RcHm_v2.0_Chr6g0249411 Rosa chinensis HOM05D004330 ORTHO05D005182 0.0e+00 1203.0 709 86.7
Prupe.1G566400 Prunus persica HOM05D004330 ORTHO05D005182 0.0e+00 1201.4 708 86.4
PSO210G1668 Papaver somniferum HOM05D004330 ORTHO05D005182 0.0e+00 1200.3 688 88.2
Cpa.g.sc249.10 Carica papaya HOM05D004330 ORTHO05D005182 0.0e+00 1198.3 696 87.2
PSO761G0081 Papaver somniferum HOM05D004330 ORTHO05D005182 0.0e+00 1198.3 688 88.1
Actinidia29358 Actinidia chinensis HOM05D004330 ORTHO05D005182 0.0e+00 1196.8 708 86.0
CSS0001083 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 0.0e+00 1189.5 696 86.8
Hma1.2p1_0016F.1_g011010 Hydrangea macrophylla HOM05D004330 ORTHO05D005182 0.0e+00 1187.6 703 86.1
Ciclev10019077m.g Citrus clementina HOM05D004330 ORTHO05D005182 0.0e+00 1186.0 708 84.9
Thecc.08G188100 Theobroma cacao HOM05D004330 ORTHO05D005182 0.0e+00 1186.0 692 86.4
TAR628G0944 Trochodendron aralioides HOM05D004330 ORTHO05D005182 0.0e+00 1181.8 671 89.9
Cfa008036 Carpinus fangiana HOM05D004330 ORTHO05D005182 0.0e+00 1181.4 708 85.3
MD15G1440000 Malus domestica HOM05D004330 ORTHO05D005182 0.0e+00 1181.0 711 85.2
FvH4_2g00140 Fragaria vesca HOM05D004330 ORTHO05D005182 0.0e+00 1179.1 709 84.9
CiPaw.03G012300 Carya illinoinensis HOM05D004330 ORTHO05D005182 0.0e+00 1176.8 708 85.5
MD08G1244900 Malus domestica HOM05D004330 ORTHO05D005182 0.0e+00 1172.1 693 85.9
FAN24G1765 Fragaria x ananassa HOM05D004330 ORTHO05D005182 0.0e+00 1170.6 700 85.3
CANSAT01G1169 Cannabis sativa HOM05D004330 ORTHO05D005182 0.0e+00 1168.7 708 83.9
Eucgr.C04264 Eucalyptus grandis HOM05D004330 ORTHO05D005182 0.0e+00 1167.1 696 84.5
Glyma.03G252000 Glycine max HOM05D004330 ORTHO05D005182 0.0e+00 1165.2 695 84.3
Manes.15G103100 Manihot esculenta HOM05D004330 ORTHO05D005182 0.0e+00 1165.2 690 85.1
Gorai.009G264800 Gossypium raimondii HOM05D004330 ORTHO05D005182 0.0e+00 1163.7 691 84.9
Gohir.D05G252400 Gossypium hirsutum HOM05D004330 ORTHO05D005182 0.0e+00 1162.5 691 84.8
Gohir.A05G251400 Gossypium hirsutum HOM05D004330 ORTHO05D005182 0.0e+00 1162.1 691 84.8
Phvul.006G106700 Phaseolus vulgaris HOM05D004330 ORTHO05D005182 0.0e+00 1162.1 695 84.0
QL09p001201 Quercus lobata HOM05D004330 ORTHO05D005182 0.0e+00 1162.1 703 84.8
Glyma.19G249400 Glycine max HOM05D004330 ORTHO05D005182 0.0e+00 1161.7 695 83.9
Rhsim01G0101300 Rhododendron simsii HOM05D004330 ORTHO05D005182 0.0e+00 1161.7 714 83.3
VMungo0540G0979 Vigna mungo HOM05D004330 ORTHO05D005182 0.0e+00 1161.4 695 83.9
ATR0580G447 Amborella trichopoda HOM05D004330 ORTHO05D005182 0.0e+00 1161.0 703 83.4
FAN19G3045 Fragaria x ananassa HOM05D004330 ORTHO05D005182 0.0e+00 1159.1 713 83.6
Lj5g0027584 Lotus japonicus HOM05D004330 ORTHO05D005182 0.0e+00 1158.7 686 85.3
Lalb_Chr04g0261991 Lupinus albus HOM05D004330 ORTHO05D005182 0.0e+00 1156.0 696 83.9
PGR031G1280 Punica granatum HOM05D004330 ORTHO05D005182 0.0e+00 1156.0 696 84.1
vmacro06107 Vaccinium macrocarpon HOM05D004330 ORTHO05D005182 0.0e+00 1152.9 731 80.8
HanXRQChr05g0150611 Helianthus annuus HOM05D004330 ORTHO05D005182 0.0e+00 1152.5 703 82.2
Sopen02g038710 Solanum pennellii HOM05D004330 ORTHO05D005182 0.0e+00 1152.1 693 83.5
Nitab4.5_0000079g0120 Nicotiana tabacum HOM05D004330 ORTHO05D005182 0.0e+00 1151.7 694 83.7
Solyc02g094090.4 Solanum lycopersicum HOM05D004330 ORTHO05D005182 0.0e+00 1151.0 691 83.6
CiPaw.04G008600 Carya illinoinensis HOM05D004330 ORTHO05D005182 0.0e+00 1150.2 702 83.8
arahy.Tifrunner.gnm1.ann1.7LJM3H Arachis hypogaea HOM05D004330 ORTHO05D005182 0.0e+00 1147.9 685 84.2
arahy.Tifrunner.gnm1.ann1.A4ASB6 Arachis hypogaea HOM05D004330 ORTHO05D005182 0.0e+00 1147.9 685 84.2
arahy.Tifrunner.gnm1.ann1.KU2W2N Arachis hypogaea HOM05D004330 ORTHO05D005182 0.0e+00 1147.9 685 84.2
Cc10_g16170 Coffea canephora HOM05D004330 ORTHO05D005182 0.0e+00 1145.6 687 85.0
CSS0008451 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 0.0e+00 1144.8 709 82.9
Sp5g26470 Schrenkiella parvula HOM05D004330 ORTHO05D005182 0.0e+00 1144.8 695 82.3
BcaC08g46563 Brassica carinata HOM05D004330 ORTHO05D005182 0.0e+00 1143.3 695 82.2
C06p45370 Brassica napus HOM05D004330 ORTHO05D005182 0.0e+00 1143.3 695 82.2
Nitab4.5_0007117g0020 Nicotiana tabacum HOM05D004330 ORTHO05D005182 0.0e+00 1141.3 694 83.0
AT1G71270 Arabidopsis thaliana HOM05D004330 ORTHO05D005182 0.0e+00 1140.9 695 82.0
DCAR_024855 Daucus carota HOM05D004330 ORTHO05D005182 0.0e+00 1140.2 731 80.2
AL2G30885 Arabidopsis lyrata HOM05D004330 ORTHO05D005182 0.0e+00 1139.8 695 82.3
A07p37610 Brassica napus HOM05D004330 ORTHO05D005182 0.0e+00 1138.6 695 81.9
BolC6t39595H Brassica oleracea HOM05D004330 ORTHO05D005182 0.0e+00 1138.6 695 81.9
Sabra06G0020300 Salix brachista HOM05D004330 ORTHO05D005182 0.0e+00 1138.6 694 83.1
Medtr1g079770 Medicago truncatula HOM05D004330 ORTHO05D005182 0.0e+00 1137.5 686 83.4
Potri.006G027100 Populus trichocarpa HOM05D004330 ORTHO05D005182 0.0e+00 1137.1 694 83.0
BcaB03g14885 Brassica carinata HOM05D004330 ORTHO05D005182 0.0e+00 1136.3 695 81.9
CAN.G473.93 Capsicum annuum HOM05D004330 ORTHO05D005182 0.0e+00 1135.9 691 82.8
Duzib177G1138 Durio zibethinus HOM05D004330 ORTHO05D005182 0.0e+00 1135.6 692 84.0
BraA07t31323Z Brassica rapa HOM05D004330 ORTHO05D005182 0.0e+00 1134.4 696 81.8
TWI12G0377 Tripterygium wilfordii HOM05D004330 ORTHO05D005182 0.0e+00 1133.6 722 81.0
Peaxi162Scf00078g01141 Petunia axillaris HOM05D004330 ORTHO05D005182 0.0e+00 1131.3 711 81.2
Carub.0002s1815 Capsella rubella HOM05D004330 ORTHO05D005182 0.0e+00 1130.5 708 80.1
CsaV3_2G033380 Cucumis sativus L. HOM05D004330 ORTHO05D005182 0.0e+00 1127.5 708 81.5
Ca_09987_v3 Cicer arietinum L. HOM05D004330 ORTHO05D005182 0.0e+00 1125.2 685 82.9
Psat6g142240 Pisum sativum HOM05D004330 ORTHO05D005182 0.0e+00 1120.1 687 82.2
MELO3C008109.2 Cucumis melo HOM05D004330 ORTHO05D005182 0.0e+00 1119.4 726 79.6
TPR.G10262 Trifolium pratense HOM05D004330 ORTHO05D005182 0.0e+00 1119.0 688 82.6
Lj7C415G17 Lonicera japonica HOM05D004330 ORTHO05D005182 0.0e+00 1118.6 696 81.5
Thhalv10018205m.g Eutrema salsugineum HOM05D004330 ORTHO05D005182 0.0e+00 1115.5 695 81.0
ECA246G0284 Erigeron canadensis HOM05D004330 ORTHO05D005182 0.0e+00 1115.1 708 79.0
THA.LOC104803377 Tarenaya hassleriana HOM05D004330 ORTHO05D005182 0.0e+00 1112.4 696 79.7
Sed0024292 Sechium edule HOM05D004330 ORTHO05D005182 0.0e+00 1112.1 708 80.6
Sc17g0000550 Simmondsia chinensis HOM05D004330 ORTHO05D005182 0.0e+00 1110.9 696 81.0
MSTRG.22475 Avicennia marina HOM05D004330 ORTHO05D005182 0.0e+00 1107.8 668 82.9
ClCG11G008260 Citrullus lanatus HOM05D004330 ORTHO05D005182 0.0e+00 1104.4 710 80.3
Os03g0417900 Oryza sativa ssp. japonica HOM05D004330 ORTHO05D005182 0.0e+00 1099.0 696 79.6
Migut.G00904 Erythranthe guttata HOM05D004330 ORTHO05D005182 0.0e+00 1096.6 685 79.9
AUR62024682 Chenopodium quinoa HOM05D004330 ORTHO05D005182 0.0e+00 1095.9 684 80.8
EL10As5g23498 Beta vulgaris HOM05D004330 ORTHO05D005182 0.0e+00 1094.7 686 80.9
Ah.11g049400 Amaranthus hybridus HOM05D004330 ORTHO05D005182 0.0e+00 1092.4 684 80.6
Oeu020638.1 Olea europaea HOM05D004330 ORTHO05D005182 0.0e+00 1089.3 769 73.9
Aa31LG4G9240 Aethionema arabicum HOM05D004330 ORTHO05D005182 0.0e+00 1086.6 737 75.7
SalBow6G7193 Salvia bowleyana HOM05D004330 ORTHO05D005182 0.0e+00 1086.2 740 74.9
THA.LOC104823378 Tarenaya hassleriana HOM05D004330 ORTHO05D005182 0.0e+00 1084.7 696 78.4
Nitab4.5_0007150g0080 Nicotiana tabacum HOM05D004330 ORTHO05D005182 0.0e+00 1084.3 704 79.4
Lsat_1_v5_gn_6_109860 Lactuca sativa HOM05D004330 ORTHO05D005182 0.0e+00 1083.9 682 80.1
Nitab4.5_0002887g0010 Nicotiana tabacum HOM05D004330 ORTHO05D005182 4.2e-306 1054.3 666 81.2
Carub.0002s1817 Capsella rubella HOM05D004330 ORTHO05D005182 1.3e-304 1049.3 690 76.8
SalBow6G1408 Salvia bowleyana HOM05D004330 ORTHO05D005182 8.7e-304 1046.6 740 73.4
unitig_37.g12692 Utricularia gibba HOM05D004330 ORTHO05D005182 1.2e-300 1036.2 732 72.7
AT1G71300 Arabidopsis thaliana HOM05D004330 ORTHO05D005182 3.1e-293 1011.5 736 70.7
AL2G30900 Arabidopsis lyrata HOM05D004330 ORTHO05D005182 3.0e-280 968.4 613 80.1
AagrBONN_evm.TU.Sc2ySwM_228.5612 Anthoceros agrestis HOM05D004330 ORTHO05D005182 1.1e-279 966.5 708 68.9
AagrBONN_evm.TU.Sc2ySwM_228.5613 Anthoceros agrestis HOM05D004330 ORTHO05D005182 1.1e-279 966.5 708 68.9
Mapoly0091s0001 Marchantia polymorpha HOM05D004330 ORTHO05D005182 1.1e-279 966.5 700 68.4
COL.COLO4_37491 Corchorus olitorius HOM05D004330 ORTHO05D005182 2.0e-279 965.7 631 78.8
AUR62011839 Chenopodium quinoa HOM05D004330 ORTHO05D005182 4.5e-276 954.5 591 80.9
HPP92_006305 Vanilla planifolia HOM05D004330 ORTHO05D005182 2.4e-269 932.2 584 79.8
SMO304G0018 Selaginella moellendorffii HOM05D004330 ORTHO05D005182 4.1e-269 931.4 691 67.7
Pp3c4_27380 Physcomitrium patens HOM05D004330 ORTHO05D005182 2.0e-268 929.1 697 67.4
Haze_02242 Corylus avellana HOM05D004330 ORTHO05D005182 1.7e-262 909.4 683 71.0
Zm00001eb393130 Zea mays HOM05D004330 ORTHO05D005182 8.3e-262 907.1 566 80.4
vmacro23409 Vaccinium macrocarpon HOM05D004330 ORTHO05D005182 1.5e-258 896.3 590 77.6
Hund19537 Selenicereus undatus HOM05D004330 ORTHO05D005182 4.0e-256 888.3 554 80.5
Atru.chr13.2589 Acer truncatum HOM05D004330 ORTHO05D005182 3.7e-254 881.7 502 88.4
MBI16_g23303_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 1.0e-248 863.6 488 90.0
SHI24508 Sapria himalayana HOM05D004330 ORTHO05D005182 2.0e-247 859.4 675 68.4
Os10g0488300 Oryza sativa ssp. japonica HOM05D004330 ORTHO05D005182 9.5e-234 813.9 680 59.6
Zm00001eb045280 Zea mays HOM05D004330 ORTHO05D005182 3.9e-219 765.4 675 57.2
CDE03G0141 Ceratophyllum demersum HOM05D004330 ORTHO05D005182 2.4e-205 719.5 423 83.7
COL.COLO4_33595 Corchorus olitorius HOM05D004330 ORTHO05D005182 1.1e-197 694.1 453 80.8
MCO11G104 Micromonas commoda HOM05D004330 ORTHO05D005182 6.1e-156 555.4 712 44.5
SEGI_21093 Sequoiadendron giganteum HOM05D004330 ORTHO05D005182 1.4e-152 544.3 328 80.5
Cre08.g367200 Chlamydomonas reinhardtii HOM05D004330 ORTHO05D005182 8.3e-145 518.5 758 39.4
Migut.C00321 Erythranthe guttata HOM05D004330 ORTHO05D005182 2.0e-130 470.7 280 81.4
CSS0031487 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 1.3e-126 458.0 273 82.8
Haze_02247 Corylus avellana HOM05D004330 ORTHO05D005182 1.9e-120 437.6 269 81.4
PRCOL_00005416 Prasinoderma coloniale HOM05D004330 ORTHO05D005182 3.9e-118 429.9 747 37.1
CBR_g54934 Chara braunii HOM05D004330 ORTHO05D005182 6.6e-118 429.1 371 59.8
MBI16_g41537_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 3.0e-110 403.7 233 83.3
HPP92_006235 Vanilla planifolia HOM05D004330 ORTHO05D005182 3.3e-109 400.2 261 82.8
COL.COLO4_00397 Corchorus olitorius HOM05D004330 ORTHO05D005182 4.3e-109 399.8 237 82.7
SGA_v2.0_scaffold227G43197 Striga asiatica HOM05D004330 ORTHO05D005182 1.1e-107 395.2 253 76.3
CDE03G0281 Ceratophyllum demersum HOM05D004330 ORTHO05D005182 5.8e-106 389.4 248 83.1
HPP92_006237 Vanilla planifolia HOM05D004330 ORTHO05D005182 4.3e-77 293.5 178 78.7
SalBow1G7663 Salvia bowleyana HOM05D001091 ORTHO05D001020 5.3e-75 286.6 215 67.4
FvH4_6g22200 Fragaria vesca HOM05D004330 ORTHO05D005182 1.9e-72 278.1 193 78.2
MBI13_g40628_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 5.5e-72 276.6 148 87.8
Rhsim02G0174800 Rhododendron simsii HOM05D004330 ORTHO05D005182 4.1e-67 260.4 195 68.7
FAN14G0768 Fragaria x ananassa HOM05D004330 ORTHO05D005182 5.3e-59 233.4 192 68.8
CBR_g54936 Chara braunii HOM05D000019 ORTHO05D000353 4.5e-58 230.3 155 65.2
Actinidia09912 Actinidia chinensis HOM05D004330 ORTHO05D005182 5.0e-57 226.9 167 71.3
QL04p036179 Quercus lobata HOM05D004330 ORTHO05D037441 4.7e-55 220.3 180 70.0
QL09p008022 Quercus lobata HOM05D004330 ORTHO05D005182 1.8e-54 218.4 214 60.3
Oeu028617.1 Olea europaea HOM05D004330 ORTHO05D005182 3.9e-54 217.2 156 69.9
Cfa027264 Carpinus fangiana HOM05D004330 ORTHO05D005182 2.7e-47 194.5 488 28.9
Nitab4.5_0006062g0030 Nicotiana tabacum HOM05D004330 ORTHO05D005182 4.0e-46 190.7 125 79.2
Hund19535 Selenicereus undatus HOM05D004330 ORTHO05D005182 6.7e-46 189.9 114 86.8
HanXRQChr10g0312231 Helianthus annuus HOM05D004330 ORTHO05D005182 1.6e-42 178.7 104 82.7
Rhsim02G0174700 Rhododendron simsii HOM05D004330 ORTHO05D005182 1.5e-40 172.2 111 84.7
SEGI_19884 Sequoiadendron giganteum HOM05D004330 ORTHO05D005182 4.4e-37 160.6 111 72.1
C06p46260 Brassica napus HOM05D004330 ORTHO05D005182 6.1e-31 140.2 100 71.0
C06p46170 Brassica napus HOM05D004330 ORTHO05D005182 3.4e-29 134.4 100 69.0
C06p46210 Brassica napus HOM05D004330 ORTHO05D005182 3.4e-29 134.4 100 69.0
CARHR152420 Cardamine hirsuta HOM05D004330 ORTHO05D005182 1.7e-25 122.1 143 51.7
CARHR064590 Cardamine hirsuta HOM05D004330 ORTHO05D005182 3.8e-25 120.9 114 58.8
MBI13_g40627_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 1.1e-24 119.4 93 67.7
Haze_14000 Corylus avellana HOM05D004330 ORTHO05D005182 7.3e-24 116.7 69 85.5
COL.COLO4_23503 Corchorus olitorius HOM05D004330 ORTHO05D005182 6.8e-22 110.2 75 76.0
Zm00001eb371470 Zea mays HOM05D003702 ORTHO05D004653 1.3e-20 105.9 63 79.4
EL10Ac2g03252 Beta vulgaris HOM05D004330 ORTHO05D005182 3.7e-20 104.4 69 69.6
Zm00001eb378040 Zea mays HOM05D004330 ORTHO05D000629 4.1e-19 100.9 59 83.1
Zm00001eb294100 Zea mays HOM05D003702 ORTHO05D004653 5.4e-19 100.5 77 67.5
HPP92_006236 Vanilla planifolia HOM05D004330 ORTHO05D005182 9.2e-19 99.8 57 84.2
HPP92_006372 Vanilla planifolia HOM05D004330 ORTHO05D005182 3.9e-17 94.4 93 57.0
EL10Ac2g03375 Beta vulgaris HOM05D015602 ORTHO05D006373 4.3e-16 90.9 65 73.8
SGA_v2.0_scaffold123G33447 Striga asiatica HOM05D004330 ORTHO05D005182 1.9e-11 75.5 78 50.0
QL05p049490 Quercus lobata HOM05D000205 ORTHO05D037441 3.2e-11 74.7 40 92.5
Haze_02240 Corylus avellana HOM05D000586 ORTHO05D001010 5.4e-11 73.9 49 75.5
COL.COLO4_37492 Corchorus olitorius HOM05D004330 ORTHO05D005182 1.9e-08 65.5 44 72.7
GSVIVG01018671001 Vitis vinifera HOM05D004330 ORTHO05D005182 9.5e-08 63.2 46 65.2
BcaB03g14888 Brassica carinata HOM05D005563 ORTHO05D006667 5.2e-06 57.4 64 53.1


User provided reference genes

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