Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01232 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 1.9e-68 262.3 125 100.0
Aqoxy4G00791 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 3.6e-59 231.5 134 84.3
Aqoxy4G00832 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 8.0e-51 203.8 105 89.5
Aqoxy4G00913 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 5.9e-46 187.6 104 80.8
Aqoxy4G01303 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 7.2e-44 180.6 105 81.9
Aqoxy4G01257 Aquilegia oxysepala HOM05D000101 ORTHO05D000089 1.0e-42 176.8 91 86.8
Aqoxy4G01229 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 1.5e-33 146.4 78 84.6
Aqoxy4G01269 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 2.5e-28 129.0 89 64.0
Aqoxy4G00173 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 1.6e-27 126.3 88 67.0
Aqoxy4G01334 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 1.9e-20 102.8 81 51.9
Aqoxy4G01331 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 8.3e-16 87.4 69 55.1
MSTRG.18389 Avicennia marina HOM05D003365 ORTHO05D003899 4.6e-14 81.6 80 45.0
PSO017G5557 Papaver somniferum HOM05D003365 ORTHO05D003899 6.0e-14 81.3 105 44.8
Os02g0621500 Oryza sativa ssp. japonica HOM05D003365 ORTHO05D003899 1.0e-13 80.5 69 56.5
RcHm_v2.0_Chr6g0284931 Rosa chinensis HOM05D003365 ORTHO05D003899 1.3e-13 80.1 80 47.5
MBI10_g18941_MAGBIO Magnolia biondii HOM05D003365 ORTHO05D003899 2.3e-13 79.3 89 43.8
Sed0009580 Sechium edule HOM05D003365 ORTHO05D003899 2.3e-13 79.3 87 46.0
CDE01G0789 Ceratophyllum demersum HOM05D003365 ORTHO05D003899 3.0e-13 79.0 70 51.4
Potri.003G178700 Populus trichocarpa HOM05D003365 ORTHO05D003899 3.0e-13 79.0 89 42.7
Sp3g22540 Schrenkiella parvula HOM05D003365 ORTHO05D003899 3.9e-13 78.6 71 50.7
SpUn0027_0020 Schrenkiella parvula HOM05D003365 ORTHO05D003899 3.9e-13 78.6 71 50.7
HPP92_012644 Vanilla planifolia HOM05D003365 ORTHO05D003899 3.9e-13 78.6 69 52.2
Potri.002G241900 Populus trichocarpa HOM05D003365 ORTHO05D003899 5.1e-13 78.2 69 53.6
Aqoxy2G03887 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 6.6e-13 77.8 95 45.3
SGA_v2.0_scaffold1G00747 Striga asiatica HOM05D003365 ORTHO05D003899 8.6e-13 77.4 104 37.5
Migut.N00374 Erythranthe guttata HOM05D003365 ORTHO05D003899 1.1e-12 77.0 74 50.0
TAR365G1159 Trochodendron aralioides HOM05D003365 ORTHO05D003899 1.1e-12 77.0 79 46.8
ClCG09G009060 Citrullus lanatus HOM05D003365 ORTHO05D003899 1.5e-12 76.6 72 48.6
Sabra03G0131000 Salix brachista HOM05D003365 ORTHO05D003899 1.5e-12 76.6 68 51.5
TWI75G0239 Tripterygium wilfordii HOM05D003365 ORTHO05D003899 1.5e-12 76.6 69 52.2
MSTRG.24620 Avicennia marina HOM05D003365 ORTHO05D003899 1.9e-12 76.3 68 51.5
Duzib138G0916 Durio zibethinus HOM05D003365 ORTHO05D003899 2.5e-12 75.9 111 38.7
Cpa.g.sc8.160 Carica papaya HOM05D003365 ORTHO05D003899 3.3e-12 75.5 68 51.5
CANSAT01G3135 Cannabis sativa HOM05D003365 ORTHO05D003899 4.3e-12 75.1 80 43.8
CiPaw.03G149600 Carya illinoinensis HOM05D003365 ORTHO05D003899 4.3e-12 75.1 76 47.4
MELO3C021013.2 Cucumis melo HOM05D003365 ORTHO05D003899 4.3e-12 75.1 72 47.2
Migut.D00534 Erythranthe guttata HOM05D003365 ORTHO05D003899 4.3e-12 75.1 72 45.8
Lj2C1132T2 Lonicera japonica HOM05D003365 ORTHO05D003899 4.3e-12 75.1 72 50.0
BcaB03g14565 Brassica carinata HOM05D003365 ORTHO05D003899 5.6e-12 74.7 71 49.3
A03p43940 Brassica napus HOM05D003365 ORTHO05D003899 5.6e-12 74.7 71 49.3
BraA03t13524Z Brassica rapa HOM05D003365 ORTHO05D003899 5.6e-12 74.7 71 49.3
Dinv38244 Davidia involucrata HOM05D003365 ORTHO05D003899 5.6e-12 74.7 69 50.7
Thhalv10002593m.g Eutrema salsugineum HOM05D003365 ORTHO05D003899 5.6e-12 74.7 69 50.7
Sed0009490 Sechium edule HOM05D003365 ORTHO05D003899 5.6e-12 74.7 72 45.8
TWI36G1690 Tripterygium wilfordii HOM05D003365 ORTHO05D003899 5.6e-12 74.7 69 52.2
BcaC01g03254 Brassica carinata HOM05D003365 ORTHO05D003899 7.3e-12 74.3 71 49.3
C03p54290 Brassica napus HOM05D003365 ORTHO05D003899 7.3e-12 74.3 71 49.3
Lalb_Chr12g0209691 Lupinus albus HOM05D003365 ORTHO05D003899 7.3e-12 74.3 73 47.9
PGSC0003DMG400029661 Solanum tuberosum HOM05D003365 ORTHO05D003899 7.3e-12 74.3 69 53.6
AT3G24800 Arabidopsis thaliana HOM05D003365 ORTHO05D003899 9.5e-12 73.9 69 49.3
Haze_24790 Corylus avellana HOM05D003365 ORTHO05D003899 9.5e-12 73.9 70 48.6
DCAR_018569 Daucus carota HOM05D003365 ORTHO05D003899 9.5e-12 73.9 72 47.2
Sopen09g034680 Solanum pennellii HOM05D003365 ORTHO05D003899 9.5e-12 73.9 69 53.6
Thecc.04G205700 Theobroma cacao HOM05D003365 ORTHO05D003899 9.5e-12 73.9 69 49.3
EL10Ac7g17831 Beta vulgaris HOM05D003365 ORTHO05D003899 1.2e-11 73.6 69 50.7
BolC3t17715H Brassica oleracea HOM05D003365 ORTHO05D003899 1.2e-11 73.6 71 49.3
Carub.0003s2521 Capsella rubella HOM05D003365 ORTHO05D003899 1.2e-11 73.6 69 49.3
Duzib151G0831 Durio zibethinus HOM05D003365 ORTHO05D003899 1.2e-11 73.6 69 47.8
Nitab4.5_0002428g0050 Nicotiana tabacum HOM05D003365 ORTHO05D003899 1.2e-11 73.6 69 52.2
Aa31sc154G60 Aethionema arabicum HOM05D003365 ORTHO05D003899 1.6e-11 73.2 68 50.0
Sc05g0002210 Simmondsia chinensis HOM05D003365 ORTHO05D003899 1.6e-11 73.2 82 43.9
Ah.08g214240 Amaranthus hybridus HOM05D000836 ORTHO05D000709 2.1e-11 72.8 87 46.0
CSS0049236 Camellia sinensis var. sinensis HOM05D003365 ORTHO05D003899 2.1e-11 72.8 78 47.4
CAN.G500.11 Capsicum annuum HOM05D003365 ORTHO05D003899 2.1e-11 72.8 69 50.7
Ciclev10004856m.g Citrus clementina HOM05D003365 ORTHO05D003899 2.1e-11 72.8 69 46.4
Nn3g19957 Nelumbo nucifera HOM05D003365 ORTHO05D003899 2.1e-11 72.8 72 48.6
Prupe.1G006100 Prunus persica HOM05D003365 ORTHO05D003899 2.1e-11 72.8 85 43.5
QL09p054586 Quercus lobata HOM05D003365 ORTHO05D003899 2.1e-11 72.8 71 47.9
THA.LOC104808785 Tarenaya hassleriana HOM05D003365 ORTHO05D003899 2.1e-11 72.8 70 50.0
Atru.chr4.1724 Acer truncatum HOM05D003365 ORTHO05D003899 2.8e-11 72.4 72 45.8
Cpa.g.sc494.2 Carica papaya HOM05D003365 ORTHO05D003899 2.8e-11 72.4 88 38.6
Solyc09g091790.3 Solanum lycopersicum HOM05D003365 ORTHO05D003899 2.8e-11 72.4 69 52.2
Aa31LG4G13410 Aethionema arabicum HOM05D003365 ORTHO05D003899 3.6e-11 72.0 70 45.7
Peaxi162Scf00047g00641 Petunia axillaris HOM05D003365 ORTHO05D003899 3.6e-11 72.0 69 52.2
Actinidia09483 Actinidia chinensis HOM05D003365 ORTHO05D003899 4.7e-11 71.6 97 41.2
Zm00001eb247460 Zea mays HOM05D003365 ORTHO05D003899 4.7e-11 71.6 83 43.4
ATR0736G227 Amborella trichopoda HOM05D003365 ORTHO05D003899 6.2e-11 71.2 71 47.9
CARHR101150 Cardamine hirsuta HOM05D003365 ORTHO05D003899 6.2e-11 71.2 72 45.8
HanXRQChr01g0022241 Helianthus annuus HOM05D003365 ORTHO05D003899 6.2e-11 71.2 78 41.0
HanXRQChr01g0022261 Helianthus annuus HOM05D003365 ORTHO05D003899 6.2e-11 71.2 78 41.0
Hund05541 Selenicereus undatus HOM05D003365 ORTHO05D003899 6.2e-11 71.2 69 49.3
Hund05542 Selenicereus undatus HOM05D003365 ORTHO05D003899 6.2e-11 71.2 69 49.3
THA.LOC104804607 Tarenaya hassleriana HOM05D003365 ORTHO05D003899 6.2e-11 71.2 79 45.6
Aqoxy4G00172 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 8.1e-11 70.9 48 60.4
COL.COLO4_10278 Corchorus olitorius HOM05D003365 ORTHO05D003899 8.1e-11 70.9 69 46.4
Manes.12G045750 Manihot esculenta HOM05D003365 ORTHO05D003899 8.1e-11 70.9 85 42.4
GSVIVG01028643001 Vitis vinifera HOM05D003365 ORTHO05D003899 8.1e-11 70.9 69 49.3
AL3G40570 Arabidopsis lyrata HOM05D003365 ORTHO05D003899 1.1e-10 70.5 94 39.4
BcaB06g26698 Brassica carinata HOM05D003365 ORTHO05D003899 1.1e-10 70.5 75 42.7
BcaC06g35759 Brassica carinata HOM05D003365 ORTHO05D003899 1.1e-10 70.5 69 47.8
BolC7t41593H Brassica oleracea HOM05D003365 ORTHO05D003899 1.1e-10 70.5 69 47.8
Thhalv10002569m.g Eutrema salsugineum HOM05D003365 ORTHO05D003899 1.1e-10 70.5 72 44.4
AUR62008908 Chenopodium quinoa HOM05D003365 ORTHO05D003899 1.4e-10 70.1 69 49.3
Gohir.D09G198000 Gossypium hirsutum HOM05D003365 ORTHO05D003899 1.4e-10 70.1 69 44.9
Medtr4g022320 Medicago truncatula HOM05D003365 ORTHO05D003899 1.4e-10 70.1 72 45.8
A07p07410 Brassica napus HOM05D003365 ORTHO05D003899 1.8e-10 69.7 70 45.7
BraA07t28528Z Brassica rapa HOM05D003365 ORTHO05D003899 1.8e-10 69.7 70 45.7
AUR62031803 Chenopodium quinoa HOM05D003365 ORTHO05D003899 1.8e-10 69.7 69 49.3
Nn1g07847 Nelumbo nucifera HOM05D003365 ORTHO05D003899 1.8e-10 69.7 68 47.1
Oeu006726.3 Olea europaea HOM05D003365 ORTHO05D003899 1.8e-10 69.7 65 52.3
FAN22G2379 Fragaria x ananassa HOM05D003365 ORTHO05D003899 2.3e-10 69.3 67 49.3
Lj1g0007670 Lotus japonicus HOM05D003365 ORTHO05D003899 2.3e-10 69.3 69 46.4
Lalb_Chr19g0125591 Lupinus albus HOM05D003365 ORTHO05D003899 2.3e-10 69.3 69 46.4
Psat3g144800 Pisum sativum HOM05D003365 ORTHO05D003899 2.3e-10 69.3 69 44.9
CsaV3_7G025900 Cucumis sativus L. HOM05D003365 ORTHO05D003899 3.1e-10 68.9 72 45.8
Gohir.A09G204300 Gossypium hirsutum HOM05D003365 ORTHO05D003899 3.1e-10 68.9 68 45.6
Gorai.006G221600 Gossypium raimondii HOM05D003365 ORTHO05D003899 3.1e-10 68.9 68 45.6
Gohir.D02G123200 Gossypium hirsutum HOM05D003365 ORTHO05D003899 4.0e-10 68.6 69 43.5
Gorai.005G131100 Gossypium raimondii HOM05D003365 ORTHO05D003899 4.0e-10 68.6 69 43.5
RcHm_v2.0_Chr4g0386021 Rosa chinensis HOM05D003365 ORTHO05D003899 4.0e-10 68.6 84 40.5
Dinv04652 Davidia involucrata HOM05D003365 ORTHO05D003899 5.2e-10 68.2 85 41.2
Thecc.01G226500 Theobroma cacao HOM05D003365 ORTHO05D003899 5.2e-10 68.2 92 40.2
BcaC06g35760 Brassica carinata HOM05D003365 ORTHO05D003899 6.8e-10 67.8 70 44.3
C07p11180 Brassica napus HOM05D003365 ORTHO05D003899 6.8e-10 67.8 70 44.3
BolC7t41590H Brassica oleracea HOM05D003365 ORTHO05D003899 6.8e-10 67.8 70 44.3
Cc01_g17080 Coffea canephora HOM05D003365 ORTHO05D003899 6.8e-10 67.8 68 47.1
Lsat_1_v5_gn_1_72781 Lactuca sativa HOM05D003365 ORTHO05D003899 6.8e-10 67.8 69 44.9
Oeu022364.1 Olea europaea HOM05D003365 ORTHO05D003899 6.8e-10 67.8 69 46.4
Psat0s1248g0040 Pisum sativum HOM05D003365 ORTHO05D003899 6.8e-10 67.8 72 45.8
Rhsim09G0055000 Rhododendron simsii HOM05D003365 ORTHO05D003899 6.8e-10 67.8 66 48.5
arahy.Tifrunner.gnm1.ann1.2FCG8X Arachis hypogaea HOM05D003365 ORTHO05D003899 1.2e-09 67.0 69 46.4
arahy.Tifrunner.gnm1.ann1.E2CR6D Arachis hypogaea HOM05D003365 ORTHO05D003899 1.2e-09 67.0 69 46.4
Ca_07518_v3 Cicer arietinum L. HOM05D003365 ORTHO05D003899 1.2e-09 67.0 69 46.4
Ca_30737_v3 Cicer arietinum L. HOM05D003365 ORTHO05D003899 1.2e-09 67.0 69 46.4
Medtr7g058430 Medicago truncatula HOM05D003365 ORTHO05D003899 1.2e-09 67.0 68 44.1
Lj3g0005766 Lotus japonicus HOM05D003365 ORTHO05D003899 1.5e-09 66.6 69 46.4
unitig_22.g5307 Utricularia gibba HOM05D003365 ORTHO05D003899 1.5e-09 66.6 70 42.9
Cc01_g17090 Coffea canephora HOM05D003365 ORTHO05D003899 2.6e-09 65.9 69 44.9
Prupe.8G203400 Prunus persica HOM05D003365 ORTHO05D003899 2.6e-09 65.9 69 44.9
ECA248G1941 Erigeron canadensis HOM05D003365 ORTHO05D000452 3.4e-09 65.5 68 44.1
Gohir.D11G143900 Gossypium hirsutum HOM05D003365 ORTHO05D003899 3.4e-09 65.5 70 44.3
Gorai.007G154100 Gossypium raimondii HOM05D003365 ORTHO05D003899 3.4e-09 65.5 70 44.3
TPR.G5612 Trifolium pratense HOM05D003365 ORTHO05D003899 3.4e-09 65.5 87 40.2
Gohir.A11G137500 Gossypium hirsutum HOM05D003365 ORTHO05D003899 4.4e-09 65.1 68 45.6
MD04G1005700 Malus domestica HOM05D003365 ORTHO05D003899 4.4e-09 65.1 83 39.8
FvH4_4g00570 Fragaria vesca HOM05D003365 ORTHO05D003899 5.8e-09 64.7 67 46.3
FAN12G0224 Fragaria x ananassa HOM05D003365 ORTHO05D003899 5.8e-09 64.7 67 46.3
FAN12G1463 Fragaria x ananassa HOM05D003365 ORTHO05D003899 5.8e-09 64.7 67 46.3
Ciclev10023514m.g Citrus clementina HOM05D003365 ORTHO05D003899 7.5e-09 64.3 69 44.9
Phvul.008G125500 Phaseolus vulgaris HOM05D003365 ORTHO05D003899 7.5e-09 64.3 68 45.6
SEGI_15541 Sequoiadendron giganteum HOM05D003365 ORTHO05D003899 7.5e-09 64.3 74 43.2
VMungo1383G0959 Vigna mungo HOM05D003365 ORTHO05D003899 7.5e-09 64.3 68 45.6
Lsat_1_v5_gn_5_179340 Lactuca sativa HOM05D003365 ORTHO05D003899 9.9e-09 63.9 68 42.6
Glyma.08G354400 Glycine max HOM05D003365 ORTHO05D003899 1.3e-08 63.5 69 43.5
Glyma.18G171400 Glycine max HOM05D003365 ORTHO05D003899 1.3e-08 63.5 69 43.5
HanXRQChr15g0468271 Helianthus annuus HOM05D003365 ORTHO05D003899 1.3e-08 63.5 69 40.6
MD10G1165000 Malus domestica HOM05D003365 ORTHO05D003899 1.3e-08 63.5 67 44.8
TPR.G5559 Trifolium pratense HOM05D003365 ORTHO05D003899 2.2e-08 62.8 95 36.8
FAN27G1822 Fragaria x ananassa HOM05D003365 ORTHO05D003899 2.9e-08 62.4 60 50.0
vmacro14754 Vaccinium macrocarpon HOM05D003365 ORTHO05D003899 3.7e-08 62.0 68 47.1
COL.COLO4_04564 Corchorus olitorius HOM05D003365 ORTHO05D003899 6.4e-08 61.2 74 47.3
Eucgr.K02172 Eucalyptus grandis HOM05D003365 ORTHO05D003899 1.1e-07 60.5 65 43.1
Eucgr.L00369 Eucalyptus grandis HOM05D003365 ORTHO05D003899 1.1e-07 60.5 65 43.1
FAN24G3306 Fragaria x ananassa HOM05D003365 ORTHO05D003899 1.4e-07 60.1 60 48.3
Eucgr.K02171 Eucalyptus grandis HOM05D003365 ORTHO05D003899 1.9e-07 59.7 67 43.3
SEGI_11490 Sequoiadendron giganteum HOM05D003365 ORTHO05D003899 1.9e-07 59.7 74 40.5
Pp3c1_21360 Physcomitrium patens HOM05D003365 ORTHO05D003899 3.2e-07 58.9 74 39.2
ECA247G2566 Erigeron canadensis HOM05D003365 ORTHO05D003899 7.1e-07 57.8 90 33.3
Oeu022255.1 Olea europaea HOM05D003365 ORTHO05D003899 7.1e-07 57.8 62 45.2
Rhsim09G0055200 Rhododendron simsii HOM05D003365 ORTHO05D003899 7.1e-07 57.8 57 49.1
Pp3c2_17040 Physcomitrium patens HOM05D003365 ORTHO05D003899 1.2e-06 57.0 66 37.9
vmacro05009 Vaccinium macrocarpon HOM05D003365 ORTHO05D003899 1.6e-06 56.6 81 34.6
Pp3c11_26150 Physcomitrium patens HOM05D003365 ORTHO05D003899 2.7e-06 55.8 67 40.3
AagrBONN_evm.TU.Sc2ySwM_368.1757 Anthoceros agrestis HOM05D003365 ORTHO05D003899 4.6e-06 55.1 76 35.5
SHI01326 Sapria himalayana HOM05D000024 ORTHO05D000007 7.8e-06 54.3 58 41.4


User provided reference genes

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