Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02576 Aquilegia oxysepala HOM05D005140 ORTHO05D006288 1.1e-263 912.9 528 100.0
TAR636G3078 Trochodendron aralioides HOM05D005140 ORTHO05D006288 2.1e-201 706.1 422 79.9
FAN13G1317 Fragaria x ananassa HOM05D005140 ORTHO05D006288 8.8e-200 700.7 436 78.0
FvH4_5g20680 Fragaria vesca HOM05D005140 ORTHO05D006288 1.5e-199 699.9 423 79.4
FAN08G1378 Fragaria x ananassa HOM05D005140 ORTHO05D006288 2.0e-199 699.5 424 79.2
Gorai.004G191200 Gossypium raimondii HOM05D005140 ORTHO05D006288 2.0e-199 699.5 421 78.9
Prupe.5G053400 Prunus persica HOM05D005140 ORTHO05D006288 2.0e-199 699.5 422 80.1
Lalb_Chr09g0324091 Lupinus albus HOM05D005140 ORTHO05D006288 2.8e-198 695.7 422 79.1
RcHm_v2.0_Chr7g0206411 Rosa chinensis HOM05D005140 ORTHO05D006288 2.8e-198 695.7 422 78.2
CAN.G572.25 Capsicum annuum HOM05D005140 ORTHO05D006288 3.7e-198 695.3 421 77.9
FAN04G2093 Fragaria x ananassa HOM05D005140 ORTHO05D006288 3.7e-198 695.3 436 77.3
MSTRG.13768 Avicennia marina HOM05D005140 ORTHO05D006288 6.3e-198 694.5 422 78.2
Rhsim07G0119600 Rhododendron simsii HOM05D005140 ORTHO05D006288 1.1e-197 693.7 440 76.4
Nn6g33739 Nelumbo nucifera HOM05D005140 ORTHO05D006288 2.4e-197 692.6 434 77.9
Thecc.03G238100 Theobroma cacao HOM05D005140 ORTHO05D006288 2.4e-197 692.6 422 78.4
Gohir.D08G182300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 3.1e-197 692.2 421 78.4
DCAR_008319 Daucus carota HOM05D005140 ORTHO05D006288 7.0e-197 691.0 421 79.6
Migut.F01520 Erythranthe guttata HOM05D005140 ORTHO05D006288 7.0e-197 691.0 435 75.4
vmacro23518 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 7.0e-197 691.0 440 76.8
Hund14471 Selenicereus undatus HOM05D005140 ORTHO05D006288 9.1e-197 690.6 437 76.7
Sopen08g026270 Solanum pennellii HOM05D005140 ORTHO05D006288 1.2e-196 690.3 423 77.3
Solyc08g077750.4 Solanum lycopersicum HOM05D005140 ORTHO05D006288 1.5e-196 689.9 423 77.5
Atru.chr9.1157 Acer truncatum HOM05D005140 ORTHO05D006288 4.5e-196 688.3 423 77.3
Ca_24617_v3 Cicer arietinum L. HOM05D005140 ORTHO05D006288 4.5e-196 688.3 442 75.3
Peaxi162Scf00301g01111 Petunia axillaris HOM05D005140 ORTHO05D006288 7.7e-196 687.6 427 76.3
PGR031G2829 Punica granatum HOM05D005140 ORTHO05D006288 7.7e-196 687.6 422 77.5
Manes.01G182900 Manihot esculenta HOM05D005140 ORTHO05D006288 5.0e-195 684.9 422 78.0
Psat2g175480 Pisum sativum HOM05D005140 ORTHO05D006288 1.9e-194 682.9 441 74.4
SGA_v2.0_scaffold20G09272 Striga asiatica HOM05D005140 ORTHO05D006288 1.9e-194 682.9 435 76.3
Cc08_g11170 Coffea canephora HOM05D005140 ORTHO05D006288 3.2e-194 682.2 437 75.1
Eucgr.D02138 Eucalyptus grandis HOM05D005140 ORTHO05D006288 4.2e-194 681.8 433 76.2
PSO063G3549 Papaver somniferum HOM05D005140 ORTHO05D006288 4.2e-194 681.8 425 78.1
CANSAT21G2106 Cannabis sativa HOM05D005140 ORTHO05D006288 9.4e-194 680.6 436 76.4
PSO782G2508 Papaver somniferum HOM05D005140 ORTHO05D006288 1.6e-193 679.9 425 77.9
Glyma.01G204000 Glycine max HOM05D005140 ORTHO05D006288 2.1e-193 679.5 420 77.6
Dinv25152 Davidia involucrata HOM05D005140 ORTHO05D006288 3.6e-193 678.7 441 75.3
COL.COLO4_06693 Corchorus olitorius HOM05D005140 ORTHO05D006288 4.7e-193 678.3 433 76.4
Phvul.002G002400 Phaseolus vulgaris HOM05D005140 ORTHO05D006288 4.7e-193 678.3 436 75.5
Lsat_1_v5_gn_6_94760 Lactuca sativa HOM05D005140 ORTHO05D006288 8.0e-193 677.6 428 77.3
Glyma.11G039000 Glycine max HOM05D005140 ORTHO05D006288 1.8e-192 676.4 422 77.3
TWI60G0080 Tripterygium wilfordii HOM05D005140 ORTHO05D006288 3.9e-192 675.2 422 77.0
arahy.Tifrunner.gnm1.ann1.FH98R9 Arachis hypogaea HOM05D005140 ORTHO05D006288 6.7e-192 674.5 437 75.1
arahy.Tifrunner.gnm1.ann1.W7TPG2 Arachis hypogaea HOM05D005140 ORTHO05D006288 6.7e-192 674.5 437 75.1
CiPaw.12G056200 Carya illinoinensis HOM05D005140 ORTHO05D006288 8.8e-192 674.1 423 76.4
Potri.001G149900 Populus trichocarpa HOM05D005140 ORTHO05D006288 7.4e-191 671.0 422 76.1
ClCG09G012630 Citrullus lanatus HOM05D005140 ORTHO05D006288 1.7e-190 669.8 423 77.1
Haze_08349 Corylus avellana HOM05D005140 ORTHO05D006288 1.7e-190 669.8 432 75.7
MELO3C003340.2 Cucumis melo HOM05D005140 ORTHO05D006288 4.8e-190 668.3 424 77.1
unitig_699.g19774 Utricularia gibba HOM05D005140 ORTHO05D006288 6.3e-190 667.9 440 73.9
CsaV3_3G049760 Cucumis sativus L. HOM05D005140 ORTHO05D006288 1.4e-189 666.8 424 76.9
Sed0020438 Sechium edule HOM05D005140 ORTHO05D006288 2.4e-189 666.0 425 76.0
Gohir.A08G162300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 1.2e-188 663.7 421 76.7
QL12p008469 Quercus lobata HOM05D005140 ORTHO05D006288 1.6e-188 663.3 422 75.8
Sed0013740 Sechium edule HOM05D005140 ORTHO05D006288 1.6e-188 663.3 439 73.3
Ah.12g053860 Amaranthus hybridus HOM05D005140 ORTHO05D006288 2.0e-188 662.9 418 76.6
MD00G1132300 Malus domestica HOM05D005140 ORTHO05D006288 3.5e-188 662.1 423 77.3
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 1.3e-187 660.2 433 74.4
Lj2g0026795 Lotus japonicus HOM05D005140 ORTHO05D006288 1.3e-187 660.2 423 74.7
Medtr5g013580 Medicago truncatula HOM05D005140 ORTHO05D006288 1.7e-187 659.8 422 75.1
vmacro14121 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 1.0e-184 650.6 440 73.6
Actinidia31490 Actinidia chinensis HOM05D005140 ORTHO05D006288 5.2e-184 648.3 472 68.4
Sabra01G0119900 Salix brachista HOM05D005140 ORTHO05D006288 6.7e-184 647.9 464 69.2
MD06G1045500 Malus domestica HOM05D005140 ORTHO05D006288 1.2e-183 647.1 429 75.5
Duzib068G0986 Durio zibethinus HOM05D005140 ORTHO05D006288 1.5e-183 646.7 396 78.3
Nn1g00730 Nelumbo nucifera HOM05D005140 ORTHO05D006288 9.7e-183 644.0 417 75.5
EL10Ac5g12239 Beta vulgaris HOM05D005140 ORTHO05D006288 1.7e-182 643.3 473 68.3
TPR.G22969 Trifolium pratense HOM05D005140 ORTHO05D006288 2.9e-179 632.5 425 73.2
Dinv28888 Davidia involucrata HOM05D005140 ORTHO05D006288 3.2e-178 629.0 395 76.5
Nitab4.5_0012059g0010 Nicotiana tabacum HOM05D005140 ORTHO05D006288 5.5e-178 628.2 452 69.0
ATR0665G273 Amborella trichopoda HOM05D005140 ORTHO05D006288 2.1e-177 626.3 424 71.7
GSVIVG01013286001 Vitis vinifera HOM05D005140 ORTHO05D006288 3.6e-177 625.5 347 84.7
THA.LOC104798349 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 8.0e-177 624.4 426 70.9
HPP92_020526 Vanilla planifolia HOM05D005140 ORTHO05D006288 2.3e-176 622.9 423 72.3
Nitab4.5_0004689g0020 Nicotiana tabacum HOM05D005140 ORTHO05D006288 3.0e-176 622.5 437 69.8
CARHR224350 Cardamine hirsuta HOM05D005140 ORTHO05D006288 6.8e-176 621.3 438 70.5
Carub.0007s2375 Capsella rubella HOM05D005140 ORTHO05D006288 8.8e-176 620.9 424 69.8
Sp7g16510 Schrenkiella parvula HOM05D005140 ORTHO05D006288 1.5e-175 620.2 426 70.2
BcaNung00074 Brassica carinata HOM05D005140 ORTHO05D006288 3.4e-175 619.0 436 70.4
C01p11300 Brassica napus HOM05D005140 ORTHO05D006288 2.8e-174 615.9 423 70.4
BcaC06g33554 Brassica carinata HOM05D005140 ORTHO05D006288 3.7e-174 615.5 424 70.0
AT4G17620 Arabidopsis thaliana HOM05D005140 ORTHO05D006288 6.3e-174 614.8 426 69.5
HanXRQChr03g0089631 Helianthus annuus HOM05D005140 ORTHO05D006288 6.3e-174 614.8 422 72.0
Ciclev10019303m.g Citrus clementina HOM05D005140 ORTHO05D006288 8.3e-174 614.4 392 76.0
BcaNung03452 Brassica carinata HOM05D005140 ORTHO05D006288 1.6e-172 610.1 420 70.2
A03p50570 Brassica napus HOM05D005140 ORTHO05D006288 2.7e-172 609.4 424 68.9
BolC7t45397H Brassica oleracea HOM05D005140 ORTHO05D006288 6.6e-171 604.7 437 67.7
BraA03t14147Z Brassica rapa HOM05D005140 ORTHO05D006288 8.6e-171 604.4 422 69.0
Thhalv10024864m.g Eutrema salsugineum HOM05D005140 ORTHO05D006288 8.6e-171 604.4 425 69.4
AUR62007191 Chenopodium quinoa HOM05D005140 ORTHO05D006288 1.9e-170 603.2 385 75.3
HPP92_028085 Vanilla planifolia HOM05D005140 ORTHO05D006288 3.3e-170 602.4 423 71.4
C07p48890 Brassica napus HOM05D005140 ORTHO05D006288 4.2e-170 602.1 437 67.5
A01p09690 Brassica napus HOM05D005140 ORTHO05D006288 4.7e-169 598.6 427 69.3
BcaC09g51625 Brassica carinata HOM05D005140 ORTHO05D006288 2.0e-167 593.2 425 68.9
BraA01t00912Z Brassica rapa HOM05D005140 ORTHO05D006288 4.4e-167 592.0 428 68.7
FAN18G3556 Fragaria x ananassa HOM05D005140 ORTHO05D006288 7.5e-167 591.3 386 75.1
Aa31LG6G380 Aethionema arabicum HOM05D005140 ORTHO05D006288 3.7e-166 589.0 438 67.6
MBI04_g38568_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 1.1e-165 587.4 402 73.9
BcaNung06713 Brassica carinata HOM05D005140 ORTHO05D006288 3.5e-164 582.4 391 71.4
SGA_v2.0_scaffold6G03141 Striga asiatica HOM05D005140 ORTHO05D006288 4.3e-162 575.5 381 73.0
HPP92_022002 Vanilla planifolia HOM05D005140 ORTHO05D006288 2.8e-161 572.8 435 66.0
Aa31LG9G15140 Aethionema arabicum HOM05D005140 ORTHO05D006288 3.6e-161 572.4 421 66.3
CDE04G2928 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 8.0e-161 571.2 396 72.2
Lj9A525T29 Lonicera japonica HOM05D005140 ORTHO05D006288 2.5e-154 549.7 368 74.7
AUR62018812 Chenopodium quinoa HOM05D005140 ORTHO05D006288 5.6e-154 548.5 313 80.8
THA.LOC104814458 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 1.6e-153 547.0 423 63.4
VMungo0239G0001 Vigna mungo HOM05D005140 ORTHO05D006288 2.3e-152 543.1 314 81.2
Lj2C253G13 Lonicera japonica HOM05D005140 ORTHO05D006288 9.8e-151 537.7 444 63.5
MBI04_g46822_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 1.2e-145 520.8 352 74.4
Os05g0392100 Oryza sativa ssp. japonica HOM05D005140 ORTHO05D006288 1.2e-135 487.6 340 72.1
Zm00001eb287280 Zea mays HOM05D005140 ORTHO05D006288 7.1e-133 478.4 293 77.8
Sc01g0007900 Simmondsia chinensis HOM05D005140 ORTHO05D006288 6.0e-132 475.3 323 71.2
AagrBONN_evm.TU.Sc2ySwM_344.2637 Anthoceros agrestis HOM05D005140 ORTHO05D006288 6.4e-126 455.3 450 53.8
GSVIVG01013283001 Vitis vinifera HOM05D005140 ORTHO05D006288 3.3e-122 443.0 432 57.4
Pp3c10_5020 Physcomitrium patens HOM05D005140 ORTHO05D006288 5.8e-119 432.2 450 50.9
Hma1.2p1_1672F.1_g296780 Hydrangea macrophylla HOM05D005140 ORTHO05D006288 4.2e-117 426.0 317 67.5
Mapoly0062s0029 Marchantia polymorpha HOM05D005140 ORTHO05D006288 1.0e-115 421.4 353 57.5
CDE12G0612 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 6.2e-113 412.1 318 65.4
SMO259G0041 Selaginella moellendorffii HOM05D005140 ORTHO05D006288 2.7e-108 396.7 327 55.0
SHI07711 Sapria himalayana HOM05D005140 ORTHO05D006288 8.7e-107 391.7 329 62.0
BolC1t01096H Brassica oleracea HOM05D005140 ORTHO05D006288 2.4e-104 383.6 219 78.1
Oeu017029.1 Olea europaea HOM05D005140 ORTHO05D006288 1.2e-95 354.8 190 85.3
CBR_g48842 Chara braunii HOM05D005140 ORTHO05D006288 8.8e-91 338.6 444 44.8
Peaxi162Scf00715g00010 Petunia axillaris HOM05D005140 ORTHO05D006288 1.8e-83 314.3 230 69.1
Cpa.g.sc98.58 Carica papaya HOM05D005140 ORTHO05D006288 4.4e-82 309.7 259 61.0
Oeu062963.3 Olea europaea HOM05D005140 ORTHO05D006288 8.6e-54 215.7 261 51.0
Psat1g146680 Pisum sativum HOM05D005140 ORTHO05D006288 1.0e-51 208.8 114 84.2
Oeu017031.1 Olea europaea HOM05D005140 ORTHO05D006288 2.2e-49 201.1 135 74.1
QL12p008508 Quercus lobata HOM05D005140 ORTHO05D006288 2.3e-46 191.0 156 66.7
MCO13G373 Micromonas commoda HOM05D005140 ORTHO05D006288 2.1e-36 157.9 295 35.3
Thecc.03G238400 Theobroma cacao HOM05D005140 ORTHO05D006288 5.2e-35 153.3 167 55.1
SEGI_19334 Sequoiadendron giganteum HOM05D005140 ORTHO05D000001 1.6e-28 131.7 97 67.0
Cre07.g338400 Chlamydomonas reinhardtii HOM05D005140 ORTHO05D006288 2.6e-26 124.4 270 33.3
MD10G1199900 Malus domestica HOM05D005140 ORTHO05D006288 9.9e-26 122.5 79 74.7
Cpa.g.c32337.2 Carica papaya HOM05D005140 ORTHO05D006288 6.4e-25 119.8 108 60.2
Cfa024662 Carpinus fangiana HOM05D005140 ORTHO05D006288 1.7e-22 111.7 319 27.9
GSVIVG01001794001 Vitis vinifera HOM05D005140 ORTHO05D006288 1.8e-19 101.7 80 61.2
DCAR_016064 Daucus carota HOM05D005140 ORTHO05D006288 4.6e-15 87.0 52 73.1
Gohir.A08G083762 Gossypium hirsutum HOM05D005140 ORTHO05D006288 2.9e-09 67.8 29 93.1
Psat6g107920 Pisum sativum HOM05D032184 ORTHO05D330502 2.7e-07 61.2 28 92.9


User provided reference genes

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