Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01594 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 0.0e+00 1377.8 718 100.0
Aqoxy4G02410 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 1.6e-281 972.6 994 58.9
Nn1g09835 Nelumbo nucifera HOM05D001937 ORTHO05D003828 3.8e-230 802.0 986 51.4
Dinv24157 Davidia involucrata HOM05D001937 ORTHO05D003828 2.0e-223 779.6 977 49.5
TAR374G1188 Trochodendron aralioides HOM05D001937 ORTHO05D003828 8.5e-222 774.2 1008 49.3
Actinidia28033 Actinidia chinensis HOM05D001937 ORTHO05D003828 7.9e-220 767.7 985 48.7
Nn2g11723 Nelumbo nucifera HOM05D001937 ORTHO05D003828 1.1e-218 763.8 988 49.4
GSVIVG01020528001 Vitis vinifera HOM05D001937 ORTHO05D003828 7.0e-216 754.6 1039 47.8
Rhsim05G0102300 Rhododendron simsii HOM05D001937 ORTHO05D003828 3.2e-213 745.7 994 48.7
Cc02_g20980 Coffea canephora HOM05D001937 ORTHO05D003828 4.2e-213 745.3 994 48.4
CSS0032005 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 7.2e-213 744.6 996 48.2
CSS0037154 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 7.2e-213 744.6 996 48.2
Dinv15990 Davidia involucrata HOM05D001937 ORTHO05D003828 3.8e-206 722.2 553 70.7
PSO782G5216 Papaver somniferum HOM05D001937 ORTHO05D003828 1.1e-205 720.7 987 46.9
DCAR_008727 Daucus carota HOM05D001937 ORTHO05D003828 1.9e-205 719.9 1013 46.5
Nitab4.5_0000244g0410 Nicotiana tabacum HOM05D001937 ORTHO05D003828 9.4e-205 717.6 987 47.4
vmacro19954 Vaccinium macrocarpon HOM05D001937 ORTHO05D003828 1.8e-203 713.4 1092 44.7
PSO063G3818 Papaver somniferum HOM05D001937 ORTHO05D003828 8.8e-203 711.1 993 46.3
Nitab4.5_0005574g0040 Nicotiana tabacum HOM05D001937 ORTHO05D003828 2.6e-202 709.5 987 47.6
Migut.B00560 Erythranthe guttata HOM05D001937 ORTHO05D003828 3.7e-201 705.7 832 51.3
Sopen07g002920 Solanum pennellii HOM05D001937 ORTHO05D003828 8.3e-201 704.5 988 46.7
Solyc07g006820.4 Solanum lycopersicum HOM05D001937 ORTHO05D003828 1.8e-200 703.4 539 70.7
Manes.07G036600 Manihot esculenta HOM05D001937 ORTHO05D003828 1.5e-197 693.7 1032 44.9
ATR1120G087 Amborella trichopoda HOM05D001937 ORTHO05D003828 6.1e-196 688.3 658 60.8
Lj2C174G11 Lonicera japonica HOM05D001937 ORTHO05D003828 6.3e-193 678.3 945 47.3
Sabra07G0092600 Salix brachista HOM05D001937 ORTHO05D003828 1.1e-192 677.6 1032 43.8
TWI23G0701 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 5.4e-192 675.2 1040 42.6
CAN.G584.7 Capsicum annuum HOM05D001937 ORTHO05D003828 1.3e-190 670.6 598 64.2
SGA_v2.0_scaffold83G26356 Striga asiatica HOM05D001937 ORTHO05D003828 1.3e-190 670.6 959 45.8
Hund12383 Selenicereus undatus HOM05D001937 ORTHO05D003828 2.3e-190 669.8 1063 43.0
Peaxi162Scf00610g00377 Petunia axillaris HOM05D001937 ORTHO05D003828 1.5e-189 667.2 949 47.6
CiPaw.05G030600 Carya illinoinensis HOM05D001937 ORTHO05D003828 7.3e-189 664.8 1009 44.7
Potri.007G113300 Populus trichocarpa HOM05D001937 ORTHO05D003828 1.2e-188 664.1 1034 43.6
EL10Ac3g06089 Beta vulgaris HOM05D001937 ORTHO05D003828 2.8e-188 662.9 549 65.0
Sabra17G0032100 Salix brachista HOM05D001937 ORTHO05D003828 2.8e-188 662.9 1040 43.8
Sc25g0001620 Simmondsia chinensis HOM05D001937 ORTHO05D003828 2.8e-188 662.9 986 45.6
HanXRQChr06g0170531 Helianthus annuus HOM05D001937 ORTHO05D003828 4.0e-187 659.1 981 46.2
HanXRQChr05g0162901 Helianthus annuus HOM05D001937 ORTHO05D003828 1.5e-186 657.1 983 46.0
TWI14G0424 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 4.4e-186 655.6 1037 42.9
Lsat_1_v5_gn_6_102941 Lactuca sativa HOM05D001937 ORTHO05D003828 1.7e-185 653.7 1020 44.6
Potri.017G047600 Populus trichocarpa HOM05D001937 ORTHO05D003828 2.9e-185 652.9 1033 43.5
COL.COLO4_05351 Corchorus olitorius HOM05D001937 ORTHO05D003828 1.8e-184 650.2 989 44.5
Ciclev10004125m.g Citrus clementina HOM05D001937 ORTHO05D003828 4.6e-183 645.6 503 68.2
Oeu029676.1 Olea europaea HOM05D001937 ORTHO05D003828 2.5e-181 639.8 499 70.1
Prupe.1G559000 Prunus persica HOM05D001937 ORTHO05D003828 2.5e-181 639.8 1031 43.5
Eucgr.I02627 Eucalyptus grandis HOM05D001937 ORTHO05D003828 5.6e-181 638.6 521 65.1
Glyma.09G215000 Glycine max HOM05D001937 ORTHO05D003828 7.3e-181 638.3 1006 43.5
MD04G1047300 Malus domestica HOM05D001937 ORTHO05D003828 9.5e-181 637.9 1033 43.5
FAN23G0892 Fragaria x ananassa HOM05D001937 ORTHO05D003828 8.0e-180 634.8 1024 43.5
PSO675G8698 Papaver somniferum HOM05D001937 ORTHO05D003828 8.0e-180 634.8 966 45.2
Duzib212G0078 Durio zibethinus HOM05D001937 ORTHO05D003828 4.0e-179 632.5 1037 41.9
Lj2g0019889 Lotus japonicus HOM05D001937 ORTHO05D003828 4.0e-179 632.5 670 56.6
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 8.9e-179 631.3 930 45.3
Atru.chr3.3791 Acer truncatum HOM05D001937 ORTHO05D003828 1.5e-178 630.6 501 67.3
Gohir.D10G124300 Gossypium hirsutum HOM05D001937 ORTHO05D003828 2.6e-178 629.8 1037 42.2
PGR042G3669 Punica granatum HOM05D001937 ORTHO05D003828 4.1e-176 622.5 553 61.8
Gohir.A10G142200 Gossypium hirsutum HOM05D001937 ORTHO05D003828 5.4e-176 622.1 1037 41.9
Gorai.011G137400 Gossypium raimondii HOM05D001937 ORTHO05D003828 5.4e-176 622.1 1037 41.9
FAN26G2897 Fragaria x ananassa HOM05D001937 ORTHO05D003828 7.0e-176 621.7 582 62.2
Cpa.g.sc177.20 Carica papaya HOM05D001937 ORTHO05D003828 1.6e-175 620.5 499 66.9
Glyma.04G123500 Glycine max HOM05D001937 ORTHO05D003828 2.0e-175 620.2 1005 42.4
Phvul.002G127400 Phaseolus vulgaris HOM05D001937 ORTHO05D003828 7.8e-175 618.2 1014 42.3
Thecc.04G168700 Theobroma cacao HOM05D001937 ORTHO05D003828 1.7e-174 617.1 1038 42.0
VMungo1215G1229 Vigna mungo HOM05D001937 ORTHO05D003828 3.0e-174 616.3 663 57.0
Ca_25089_v3 Cicer arietinum L. HOM05D001937 ORTHO05D003828 8.6e-174 614.8 584 60.4
FAN19G2543 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.5e-173 614.0 1019 42.5
Psat2g142560 Pisum sativum HOM05D001937 ORTHO05D003828 1.9e-173 613.6 1006 42.8
AUR62023793 Chenopodium quinoa HOM05D001937 ORTHO05D003828 9.5e-173 611.3 959 43.9
THA.LOC104811101 Tarenaya hassleriana HOM05D001937 ORTHO05D003828 9.5e-173 611.3 503 65.0
RcHm_v2.0_Chr3g0492481 Rosa chinensis HOM05D001937 ORTHO05D003828 1.6e-172 610.5 1027 42.4
AUR62002404 Chenopodium quinoa HOM05D001937 ORTHO05D003828 2.8e-172 609.8 906 45.3
FAN28G0964 Fragaria x ananassa HOM05D001937 ORTHO05D003828 6.2e-172 608.6 1016 42.7
Zm00001eb386900 Zea mays HOM05D001937 ORTHO05D003828 3.1e-171 606.3 966 42.4
ECA246G2336 Erigeron canadensis HOM05D001937 ORTHO05D003828 8.9e-171 604.7 504 65.9
FvH4_1g29900 Fragaria vesca HOM05D001937 ORTHO05D003828 8.9e-171 604.7 1020 42.2
Os06g0645800 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D003828 1.2e-170 604.4 509 62.3
CANSAT11G1347 Cannabis sativa HOM05D001937 ORTHO05D003828 3.4e-170 602.8 1032 42.2
unitig_46.g18832 Utricularia gibba HOM05D001937 ORTHO05D003828 4.4e-170 602.4 550 61.5
Medtr5g026660 Medicago truncatula HOM05D001937 ORTHO05D003828 1.1e-168 597.8 1023 41.8
arahy.Tifrunner.gnm1.ann1.4559ZH Arachis hypogaea HOM05D001937 ORTHO05D003828 1.9e-168 597.0 500 65.2
arahy.Tifrunner.gnm1.ann1.9SH8TS Arachis hypogaea HOM05D001937 ORTHO05D003828 1.9e-168 597.0 500 65.2
A08p09140 Brassica napus HOM05D001937 ORTHO05D003828 5.4e-168 595.5 502 63.9
BraA08t32916Z Brassica rapa HOM05D001937 ORTHO05D003828 5.4e-168 595.5 502 63.9
AT1G32750 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 7.1e-168 595.1 502 64.1
Lalb_Chr09g0325221 Lupinus albus HOM05D001937 ORTHO05D003828 7.1e-168 595.1 658 54.7
BcaB04g17964 Brassica carinata HOM05D001937 ORTHO05D003828 1.2e-167 594.3 502 63.9
BolC8t47960H Brassica oleracea HOM05D001937 ORTHO05D003828 1.2e-167 594.3 502 63.7
Lalb_Chr05g0215381 Lupinus albus HOM05D001937 ORTHO05D003828 6.0e-167 592.0 474 66.7
Sp1g28210 Schrenkiella parvula HOM05D001937 ORTHO05D003828 7.8e-167 591.7 643 54.9
BcaC07g37602 Brassica carinata HOM05D001937 ORTHO05D003828 1.0e-166 591.3 553 60.4
AL1G47030 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 3.9e-166 589.3 502 63.3
ClCG09G008530 Citrullus lanatus HOM05D001937 ORTHO05D003828 3.9e-166 589.3 632 55.1
Carub.0001s3108 Capsella rubella HOM05D001937 ORTHO05D003828 9.5e-165 584.7 643 54.4
Thhalv10006532m.g Eutrema salsugineum HOM05D001937 ORTHO05D003828 1.2e-164 584.3 642 53.9
TPR.G17275 Trifolium pratense HOM05D001937 ORTHO05D003828 8.1e-164 581.6 1013 40.9
Aa31LG2G13230 Aethionema arabicum HOM05D001937 ORTHO05D003828 4.0e-163 579.3 502 63.5
Sed0011905 Sechium edule HOM05D001937 ORTHO05D003828 5.2e-163 578.9 586 57.8
MELO3C021095.2 Cucumis melo HOM05D001937 ORTHO05D003828 1.5e-162 577.4 632 54.3
CsaV3_7G026510 Cucumis sativus L. HOM05D001937 ORTHO05D003828 5.8e-162 575.5 632 54.1
CARHR032130 Cardamine hirsuta HOM05D001937 ORTHO05D003828 8.6e-158 561.6 506 61.3
BcaC09g48870 Brassica carinata HOM05D001937 ORTHO05D003828 3.4e-154 549.7 558 56.8
C01p44990 Brassica napus HOM05D001937 ORTHO05D003828 3.4e-154 549.7 558 56.8
BraA01t03625Z Brassica rapa HOM05D001937 ORTHO05D003828 7.6e-154 548.5 506 60.5
BolC1t04467H Brassica oleracea HOM05D001937 ORTHO05D003828 2.9e-153 546.6 504 60.5
Pp3c14_1870 Physcomitrium patens HOM05D001937 ORTHO05D003828 1.7e-150 537.3 499 58.7
A01p35430 Brassica napus HOM05D001937 ORTHO05D003828 1.5e-149 534.3 559 55.6
AL3G32430 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 1.6e-148 530.8 510 59.0
Sp3g17140 Schrenkiella parvula HOM05D001937 ORTHO05D003828 1.4e-147 527.7 558 56.3
AagrBONN_evm.TU.Sc2ySwM_117.3403 Anthoceros agrestis HOM05D001937 ORTHO05D003828 2.0e-146 523.9 514 56.8
BcaB04g20722 Brassica carinata HOM05D001937 ORTHO05D003828 2.6e-146 523.5 544 56.1
Pp3c10_350 Physcomitrium patens HOM05D001937 ORTHO05D003828 9.9e-146 521.5 470 59.8
Mapoly0010s0177 Marchantia polymorpha HOM05D001937 ORTHO05D003828 2.4e-144 516.9 483 59.0
AT3G19040 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 3.9e-142 509.6 510 56.3
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 5.8e-138 495.7 593 51.3
HPP92_017203 Vanilla planifolia HOM05D001937 ORTHO05D003828 7.6e-138 495.4 363 70.8
DCAR_019148 Daucus carota HOM05D001937 ORTHO05D003828 6.9e-131 472.2 767 43.4
CDE08G0555 Ceratophyllum demersum HOM05D001937 ORTHO05D003828 4.8e-124 449.5 333 70.6
RcHm_v2.0_Chr5g0013481 Rosa chinensis HOM05D001937 ORTHO05D003828 6.5e-121 439.1 535 51.0
CARHR094480 Cardamine hirsuta HOM05D001937 ORTHO05D003828 8.8e-110 402.1 406 55.9
FAN11G3092 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.1e-109 401.7 572 47.0
FvH4_3g05980 Fragaria vesca HOM05D001937 ORTHO05D003828 4.4e-109 399.8 535 48.8
CBR_g2821 Chara braunii HOM05D001937 ORTHO05D003828 1.0e-105 388.7 454 48.9
SMO118G0440 Selaginella moellendorffii HOM05D001937 ORTHO05D003828 1.3e-100 371.7 340 58.2
FAN25G3599 Fragaria x ananassa HOM05D001937 ORTHO05D003828 3.7e-100 370.2 584 43.3
Ciclev10004140m.g Citrus clementina HOM05D001937 ORTHO05D003828 5.3e-91 339.7 499 45.3
SEGI_20322 Sequoiadendron giganteum HOM05D001937 ORTHO05D003828 1.9e-72 278.1 233 67.0
SEGI_36763 Sequoiadendron giganteum HOM05D001937 ORTHO05D000001 5.2e-70 270.0 201 65.7
FAN21G3055 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.5e-64 251.9 476 40.8
PRCOL_00000485 Prasinoderma coloniale HOM05D001937 ORTHO05D003828 2.5e-56 224.6 456 33.1
CDE08G1500 Ceratophyllum demersum HOM05D001937 ORTHO05D003828 7.5e-53 213.0 623 32.9
Atru.chr8.1124 Acer truncatum HOM05D001937 ORTHO05D003828 1.0e-49 202.6 398 36.7
Aqoxy3G01486 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 2.3e-41 174.9 304 42.8
QL03p072736 Quercus lobata HOM05D001937 ORTHO05D003828 7.3e-40 169.9 199 53.8
QL03p022329 Quercus lobata HOM05D001937 ORTHO05D003828 1.2e-39 169.1 199 53.8
QL11p053735 Quercus lobata HOM05D001937 ORTHO05D003828 1.2e-39 169.1 181 58.6
QL03p060281 Quercus lobata HOM05D001937 ORTHO05D003828 3.6e-39 167.5 199 53.8
QL11p029100 Quercus lobata HOM05D001937 ORTHO05D003828 4.7e-39 167.2 199 53.8
MCO03G045 Micromonas commoda HOM05D001937 ORTHO05D003828 1.9e-32 145.2 461 29.1
Cre10.g425501 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D003828 4.3e-32 144.1 400 29.0
Lsat_1_v5_gn_1_126141 Lactuca sativa HOM05D001937 ORTHO05D003828 3.1e-30 137.9 118 66.9
PGR004G2098 Punica granatum HOM05D001937 ORTHO05D003828 4.0e-30 137.5 104 65.4
Lsat_1_v5_gn_5_13461 Lactuca sativa HOM05D002884 ORTHO05D003828 8.4e-28 129.8 138 51.4
Prupe.1G009900 Prunus persica HOM05D001937 ORTHO05D003828 1.1e-27 129.4 232 44.4
HPP92_017202 Vanilla planifolia HOM05D001937 ORTHO05D003828 4.6e-26 124.0 592 27.5
Lsat_1_v5_gn_6_64721 Lactuca sativa HOM05D001937 ORTHO05D003828 1.9e-24 118.6 87 72.4
Lsat_1_v5_gn_5_134300 Lactuca sativa HOM05D001937 ORTHO05D003828 5.6e-24 117.1 86 72.1
QL02p062665 Quercus lobata HOM05D001937 ORTHO05D003828 1.1e-22 112.8 87 69.0
QL04p008924 Quercus lobata HOM05D001937 ORTHO05D003828 1.1e-22 112.8 87 69.0
QL06p020738 Quercus lobata HOM05D001937 ORTHO05D003828 1.1e-22 112.8 87 69.0
QL12p036527 Quercus lobata HOM05D001937 ORTHO05D003828 1.1e-22 112.8 87 69.0
QL12p030812 Quercus lobata HOM05D001937 ORTHO05D003828 3.4e-21 107.8 219 40.2
Lsat_1_v5_gn_9_58581 Lactuca sativa HOM05D000390 ORTHO05D003828 3.8e-20 104.4 82 63.4
SEGI_03339 Sequoiadendron giganteum HOM05D001937 ORTHO05D003828 4.6e-18 97.4 82 65.9
Lsat_1_v5_gn_6_49360 Lactuca sativa HOM05D001937 ORTHO05D003828 8.2e-15 86.7 112 51.8
Hma1.2p1_0109F.1_g052690 Hydrangea macrophylla HOM05D001937 ORTHO05D003828 4.0e-14 84.3 71 66.2
Atru.chr3.3789 Acer truncatum HOM05D001937 ORTHO05D003828 5.3e-14 84.0 81 56.8
Nn4g23023 Nelumbo nucifera HOM05D001937 ORTHO05D003828 3.2e-11 74.7 108 44.4
AL7G43080 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 9.3e-11 73.2 65 55.4
TAR374G0100 Trochodendron aralioides HOM05D001937 ORTHO05D003828 9.3e-11 73.2 62 61.3
Mapoly0048s0004 Marchantia polymorpha HOM05D001937 ORTHO05D003828 3.5e-10 71.2 220 32.7
RcHm_v2.0_Chr5g0013491 Rosa chinensis HOM05D001937 ORTHO05D003828 2.3e-09 68.6 65 53.8
SEGI_35630 Sequoiadendron giganteum HOM05D001937 ORTHO05D003828 2.3e-09 68.6 67 52.2
Rhsim05G0102700 Rhododendron simsii HOM05D001937 ORTHO05D009414 9.7e-08 63.2 242 29.8
Aa31LG7G15320 Aethionema arabicum HOM05D001937 ORTHO05D003828 1.3e-07 62.8 172 33.1
Lsat_1_v5_gn_9_87941 Lactuca sativa HOM05D006430 ORTHO05D007585 1.3e-07 62.8 66 43.9
PSO384G4225 Papaver somniferum HOM05D003118 ORTHO05D003618 1.1e-06 59.7 106 42.5
Lsat_1_v5_gn_4_144260 Lactuca sativa HOM05D001937 ORTHO05D003828 6.9e-06 57.0 69 55.1


User provided reference genes

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