Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00045 Aquilegia oxysepala HOM05D001054 ORTHO05D007110 0.0e+00 1104.4 540 100.0
Nn7g37208 Nelumbo nucifera HOM05D001054 ORTHO05D007110 3.0e-280 968.0 540 86.5
TAR625G0225 Trochodendron aralioides HOM05D001054 ORTHO05D007110 7.2e-274 946.8 541 85.8
PSO541G5579 Papaver somniferum HOM05D001054 ORTHO05D007110 1.8e-272 942.2 540 85.0
PSO675G2247 Papaver somniferum HOM05D001054 ORTHO05D007110 3.3e-271 937.9 540 84.6
TWI09G0178 Tripterygium wilfordii HOM05D001054 ORTHO05D007110 2.6e-268 928.3 541 82.1
TAR628G0943 Trochodendron aralioides HOM05D001054 ORTHO05D007110 4.5e-268 927.5 540 83.1
MBI19_g10811_MAGBIO Magnolia biondii HOM05D001054 ORTHO05D007110 1.0e-267 926.4 540 83.7
Cpa.g.sc6.46 Carica papaya HOM05D001054 ORTHO05D007110 7.2e-266 920.2 542 81.9
Manes.13G113500 Manihot esculenta HOM05D001054 ORTHO05D007110 8.0e-265 916.8 540 82.2
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla HOM05D001054 ORTHO05D007110 6.7e-264 913.7 540 82.4
Lj7C88G8 Lonicera japonica HOM05D001054 ORTHO05D007110 8.8e-264 913.3 540 82.2
MSTRG.23690 Avicennia marina HOM05D001054 ORTHO05D007110 1.5e-263 912.5 546 81.9
Oeu013280.1 Olea europaea HOM05D001054 ORTHO05D007110 2.6e-263 911.8 540 82.2
Thecc.01G069100 Theobroma cacao HOM05D001054 ORTHO05D007110 9.7e-263 909.8 541 82.3
CiPaw.01G007000 Carya illinoinensis HOM05D001054 ORTHO05D007110 1.1e-261 906.4 542 81.2
Cc07_g06840 Coffea canephora HOM05D001054 ORTHO05D007110 1.8e-261 905.6 546 80.6
Eucgr.C03692 Eucalyptus grandis HOM05D001054 ORTHO05D007110 1.8e-261 905.6 544 80.3
Gorai.008G080600 Gossypium raimondii HOM05D001054 ORTHO05D007110 4.1e-261 904.4 541 81.7
Eucgr.C03920 Eucalyptus grandis HOM05D001054 ORTHO05D007110 5.3e-261 904.0 488 86.5
CANSAT01G2549 Cannabis sativa HOM05D001054 ORTHO05D007110 7.0e-261 903.7 543 81.2
Solyc10g080040.3 Solanum lycopersicum HOM05D001054 ORTHO05D007110 9.1e-261 903.3 540 81.1
FvH4_1g17270 Fragaria vesca HOM05D001054 ORTHO05D007110 1.2e-260 902.9 541 81.1
PGSC0003DMG400023692 Solanum tuberosum HOM05D001054 ORTHO05D007110 3.5e-260 901.4 540 80.9
Gohir.D12G073300 Gossypium hirsutum HOM05D001054 ORTHO05D007110 7.7e-260 900.2 541 81.3
Sopen10g030650 Solanum pennellii HOM05D001054 ORTHO05D007110 7.7e-260 900.2 540 80.7
CDE04G1953 Ceratophyllum demersum HOM05D001054 ORTHO05D007110 1.0e-259 899.8 542 82.1
SalBow6G1211 Salvia bowleyana HOM05D001054 ORTHO05D007110 1.3e-259 899.4 541 80.6
Sed0014779 Sechium edule HOM05D001054 ORTHO05D007110 1.3e-259 899.4 541 79.7
Cfa004102 Carpinus fangiana HOM05D001054 ORTHO05D007110 1.7e-259 899.0 542 80.3
PGR004G0129 Punica granatum HOM05D001054 ORTHO05D007110 2.2e-259 898.7 541 80.4
DCAR_010834 Daucus carota HOM05D001054 ORTHO05D007110 8.5e-259 896.7 552 79.0
Duzib264G0621 Durio zibethinus HOM05D001054 ORTHO05D007110 8.5e-259 896.7 489 86.1
HanXRQChr14g0441861 Helianthus annuus HOM05D001054 ORTHO05D007110 2.5e-258 895.2 546 78.8
Ciclev10025341m.g Citrus clementina HOM05D001054 ORTHO05D007110 3.2e-258 894.8 541 80.4
CsaV3_6G043910 Cucumis sativus L. HOM05D001054 ORTHO05D007110 3.2e-258 894.8 541 78.9
Peaxi162Scf00365g00936 Petunia axillaris HOM05D001054 ORTHO05D007110 3.2e-258 894.8 537 80.8
FAN19G1445 Fragaria x ananassa HOM05D001054 ORTHO05D007110 7.2e-258 893.6 550 79.6
Prupe.6G223800 Prunus persica HOM05D001054 ORTHO05D007110 9.4e-258 893.3 543 80.3
Potri.007G053000 Populus trichocarpa HOM05D001054 ORTHO05D007110 1.2e-257 892.9 540 78.9
Migut.H00367 Erythranthe guttata HOM05D001054 ORTHO05D007110 2.7e-257 891.7 540 80.7
ClCG01G017380 Citrullus lanatus HOM05D001054 ORTHO05D007110 1.0e-256 889.8 546 79.1
Sed0024674 Sechium edule HOM05D001054 ORTHO05D007110 1.8e-256 889.0 541 78.6
Nitab4.5_0002331g0050 Nicotiana tabacum HOM05D001054 ORTHO05D007110 3.0e-256 888.3 540 80.4
Nitab4.5_0006689g0010 Nicotiana tabacum HOM05D001054 ORTHO05D007110 4.0e-256 887.9 540 80.4
FAN23G1327 Fragaria x ananassa HOM05D001054 ORTHO05D007110 6.8e-256 887.1 563 76.7
RcHm_v2.0_Chr2g0107461 Rosa chinensis HOM05D001054 ORTHO05D007110 1.5e-255 885.9 594 74.1
Sc16g0004970 Simmondsia chinensis HOM05D001054 ORTHO05D007110 1.5e-255 885.9 525 81.1
SGA_v2.0_scaffold72G24093 Striga asiatica HOM05D001054 ORTHO05D007110 2.0e-255 885.6 539 78.7
FAN26G1436 Fragaria x ananassa HOM05D001054 ORTHO05D007110 2.6e-255 885.2 576 76.2
Atru.chr3.194 Acer truncatum HOM05D001054 ORTHO05D007110 4.4e-255 884.4 540 78.3
MELO3C007616.2 Cucumis melo HOM05D001054 ORTHO05D007110 4.8e-254 880.9 572 75.7
COL.COLO4_11542 Corchorus olitorius HOM05D001054 ORTHO05D007110 6.3e-254 880.6 541 79.1
Rhsim10G0102900 Rhododendron simsii HOM05D001054 ORTHO05D007110 1.1e-253 879.8 591 74.8
Aa31LG6G14390 Aethionema arabicum HOM05D001054 ORTHO05D007110 2.4e-253 878.6 547 78.1
Atru.chr3.165 Acer truncatum HOM05D001054 ORTHO05D007110 3.1e-253 878.2 543 77.9
ATR1096G061 Amborella trichopoda HOM05D001054 ORTHO05D007110 7.0e-253 877.1 530 79.8
Lsat_1_v5_gn_2_83701 Lactuca sativa HOM05D001054 ORTHO05D007110 7.0e-253 877.1 544 79.0
Sabra07G0046600 Salix brachista HOM05D001054 ORTHO05D007110 7.0e-253 877.1 540 78.1
AUR62040267 Chenopodium quinoa HOM05D001054 ORTHO05D007110 4.5e-252 874.4 525 80.2
CARHR245910 Cardamine hirsuta HOM05D001054 ORTHO05D007110 5.9e-252 874.0 539 78.1
AUR62003982 Chenopodium quinoa HOM05D001054 ORTHO05D007110 2.2e-251 872.1 525 79.8
AT4G37510 Arabidopsis thaliana HOM05D001054 ORTHO05D007110 2.9e-251 871.7 535 78.1
EL10Ac6g15648 Beta vulgaris HOM05D001054 ORTHO05D007110 5.0e-251 870.9 544 77.8
AL7G13250 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 6.5e-251 870.5 527 79.5
Carub.0007s0278 Capsella rubella HOM05D001054 ORTHO05D007110 6.5e-251 870.5 535 77.9
Haze_15309 Corylus avellana HOM05D001054 ORTHO05D007110 7.2e-250 867.1 562 76.0
THA.LOC104807624 Tarenaya hassleriana HOM05D001054 ORTHO05D007110 9.5e-250 866.7 540 78.3
Thhalv10024858m.g Eutrema salsugineum HOM05D001054 ORTHO05D007110 2.1e-249 865.5 538 77.5
Psat2g170280 Pisum sativum HOM05D001054 ORTHO05D007110 2.8e-249 865.1 542 79.0
Sp7g35190 Schrenkiella parvula HOM05D001054 ORTHO05D007110 1.8e-248 862.4 540 77.4
DCAR_021470 Daucus carota HOM05D001054 ORTHO05D007110 5.2e-248 860.9 527 79.7
TPR.G20955 Trifolium pratense HOM05D001054 ORTHO05D007110 5.2e-248 860.9 546 78.2
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 2.0e-247 859.0 490 82.9
Medtr5g016070 Medicago truncatula HOM05D001054 ORTHO05D007110 6.3e-246 854.0 542 78.2
Glyma.11G049900 Glycine max HOM05D001054 ORTHO05D007110 8.3e-246 853.6 543 78.5
Lj2g0007837 Lotus japonicus HOM05D001054 ORTHO05D007110 7.0e-245 850.5 540 78.1
Glyma.01G192200 Glycine max HOM05D001054 ORTHO05D007110 1.6e-244 849.4 492 82.1
Hund13932 Selenicereus undatus HOM05D001054 ORTHO05D007110 1.0e-243 846.7 545 75.8
A01p01450 Brassica napus HOM05D001054 ORTHO05D007110 5.0e-243 844.3 523 78.2
BraA01t00139Z Brassica rapa HOM05D001054 ORTHO05D007110 5.0e-243 844.3 523 78.2
SGA_v2.0_scaffold15G07420 Striga asiatica HOM05D001054 ORTHO05D007110 6.6e-243 844.0 489 81.2
VMungo1215G2035 Vigna mungo HOM05D001054 ORTHO05D007110 1.5e-242 842.8 540 78.0
BcaNung03665 Brassica carinata HOM05D001054 ORTHO05D007110 1.9e-242 842.4 542 75.8
C01p01620 Brassica napus HOM05D001054 ORTHO05D007110 1.9e-242 842.4 542 75.8
Phvul.002G012600 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 4.7e-241 837.8 540 76.9
BolC1t00157H Brassica oleracea HOM05D001054 ORTHO05D007110 8.0e-241 837.0 541 75.6
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 4.0e-240 834.7 469 84.2
Lalb_Chr05g0213551 Lupinus albus HOM05D001054 ORTHO05D007110 5.2e-240 834.3 541 76.2
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea HOM05D001054 ORTHO05D007110 5.7e-239 830.9 547 75.1
BcaNung05084 Brassica carinata HOM05D001054 ORTHO05D007110 9.8e-239 830.1 541 75.0
CSS0030463 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 2.9e-238 828.6 542 76.9
Lalb_Chr09g0323511 Lupinus albus HOM05D001054 ORTHO05D007110 2.9e-238 828.6 554 74.7
Os01g0810100 Oryza sativa ssp. japonica HOM05D001054 ORTHO05D007110 1.8e-237 825.9 483 80.1
HPP92_018502 Vanilla planifolia HOM05D001054 ORTHO05D007110 6.6e-235 817.4 478 79.1
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea HOM05D001054 ORTHO05D007110 2.6e-231 805.4 538 74.2
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea HOM05D001054 ORTHO05D007110 3.4e-231 805.1 553 72.7
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea HOM05D001054 ORTHO05D007110 3.4e-231 805.1 569 71.4
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea HOM05D001054 ORTHO05D007110 4.4e-231 804.7 549 73.0
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea HOM05D001054 ORTHO05D007110 3.7e-230 801.6 553 72.5
VMungo0251G1033 Vigna mungo HOM05D001054 ORTHO05D007110 6.8e-224 780.8 544 70.8
HPP92_017544 Vanilla planifolia HOM05D001054 ORTHO05D007110 7.5e-223 777.3 473 77.4
Lj4g0019986 Lotus japonicus HOM05D001054 ORTHO05D007110 2.2e-222 775.8 544 70.2
Phvul.003G236900 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 1.0e-219 766.9 544 69.3
Ah.02g125600 Amaranthus hybridus HOM05D001054 ORTHO05D007110 6.2e-209 731.1 426 79.3
Medtr4g095410 Medicago truncatula HOM05D001054 ORTHO05D007110 3.1e-208 728.8 540 66.7
ECA238G1085 Erigeron canadensis HOM05D001054 ORTHO05D007110 1.2e-207 726.9 398 83.7
TPR.G23864 Trifolium pratense HOM05D001054 ORTHO05D007110 1.2e-207 726.9 542 66.4
Zm00001eb150280 Zea mays HOM05D001054 ORTHO05D007110 2.0e-207 726.1 472 74.2
Gohir.A12G075200 Gossypium hirsutum HOM05D001054 ORTHO05D007110 1.6e-201 706.4 389 85.6
Dinv26904 Davidia involucrata HOM05D001054 ORTHO05D007110 1.1e-192 677.2 409 82.2
Actinidia36442 Actinidia chinensis HOM05D001054 ORTHO05D007110 1.6e-188 663.3 521 65.5
Psat4g083600 Pisum sativum HOM05D001054 ORTHO05D007110 1.5e-183 646.7 398 75.4
CSS0024742 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 5.1e-179 631.7 332 87.3
HPP92_017568 Vanilla planifolia HOM05D001054 ORTHO05D007110 3.6e-156 555.8 339 77.6
Pp3c5_10700 Physcomitrium patens HOM05D001054 ORTHO05D007110 2.2e-153 546.6 477 56.4
Mapoly0005s0153 Marchantia polymorpha HOM05D001054 ORTHO05D007110 2.8e-153 546.2 466 56.4
AL5G41245 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 4.8e-153 545.4 405 68.9
GSVIVG01000148001 Vitis vinifera HOM05D001054 ORTHO05D007110 7.7e-151 538.1 283 86.6
SEGI_29234 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 5.0e-134 482.3 424 58.3
SMO119G0428 Selaginella moellendorffii HOM05D001054 ORTHO05D007110 5.5e-133 478.8 451 53.4
vmacro05387 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 3.6e-132 476.1 346 66.8
AagrBONN_evm.TU.Sc2ySwM_368.879 Anthoceros agrestis HOM05D001054 ORTHO05D007110 4.9e-129 465.7 451 52.3
Glyma.05G104100 Glycine max HOM05D001054 ORTHO05D007110 8.9e-123 444.9 342 66.7
vmacro05388 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 1.5e-109 401.0 272 75.7
FAN28G0670 Fragaria x ananassa HOM05D001054 ORTHO05D007110 2.0e-90 337.4 236 75.0
MD15G1293700 Malus domestica HOM05D001054 ORTHO05D007110 5.4e-88 329.3 181 82.3
Duzib147G0207 Durio zibethinus HOM05D001054 ORTHO05D007110 2.5e-85 320.5 182 81.9
AL7G13080 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 3.7e-76 290.0 172 79.1
SEGI_10508 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 2.1e-55 221.1 135 74.8
Actinidia11996 Actinidia chinensis HOM05D001054 ORTHO05D007110 7.4e-45 186.0 115 76.5
Eucgr.C03694 Eucalyptus grandis HOM05D001054 ORTHO05D026867 3.8e-41 173.7 102 77.5
Actinidia11995 Actinidia chinensis HOM05D001054 ORTHO05D038022 2.2e-33 147.9 80 85.0
Oeu038701.1 Olea europaea HOM05D001054 ORTHO05D038022 5.9e-26 123.2 67 82.1
AT2G48121 Arabidopsis thaliana HOM05D001054 ORTHO05D026867 6.3e-20 103.2 57 80.7
C07p62420 Brassica napus HOM05D001054 ORTHO05D007110 2.4e-19 101.3 53 86.8
A03p65210 Brassica napus HOM05D001054 ORTHO05D026867 4.1e-19 100.5 60 73.3
BraA03t15579Z Brassica rapa HOM05D001054 ORTHO05D026867 4.1e-19 100.5 60 73.3
BcaNung02059 Brassica carinata HOM05D001054 ORTHO05D007110 7.7e-18 96.3 50 84.0
Sed0007349 Sechium edule HOM05D001054 ORTHO05D007110 4.9e-12 77.0 78 50.0


User provided reference genes

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