Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 2.6e-194 681.8 325 100.0
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 1.7e-177 625.9 323 91.3
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 7.4e-165 583.9 321 83.8
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 6.9e-163 577.4 323 82.0
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 4.5e-162 574.7 323 81.7
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 4.9e-161 571.2 318 82.4
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 4.6e-159 564.7 325 80.3
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 1.8e-158 562.8 323 80.2
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 2.3e-158 562.4 321 81.0
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 2.3e-158 562.4 323 79.9
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 5.1e-158 561.2 323 79.6
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 5.1e-158 561.2 322 81.1
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 6.7e-158 560.8 317 80.8
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 1.5e-157 559.7 320 80.6
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 1.9e-157 559.3 330 78.2
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 5.7e-157 557.8 325 79.4
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 5.7e-157 557.8 320 79.4
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 7.4e-157 557.4 317 80.8
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 7.4e-157 557.4 316 81.6
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 1.6e-156 556.2 316 79.7
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 1.6e-156 556.2 316 79.7
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 2.1e-156 555.8 323 79.9
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 2.1e-156 555.8 325 79.1
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 2.1e-156 555.8 320 80.0
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 2.1e-156 555.8 319 79.9
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 2.1e-156 555.8 322 81.1
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 2.8e-156 555.4 319 80.6
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 2.8e-156 555.4 324 79.6
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 2.8e-156 555.4 325 79.7
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 2.8e-156 555.4 325 79.7
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 2.8e-156 555.4 314 80.6
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 6.2e-156 554.3 323 78.3
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 6.2e-156 554.3 316 79.4
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 6.2e-156 554.3 319 79.0
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 6.2e-156 554.3 316 81.3
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 8.2e-156 553.9 314 82.2
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 1.1e-155 553.5 322 78.3
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 2.4e-155 552.4 322 78.9
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 2.4e-155 552.4 319 78.7
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 5.3e-155 551.2 325 77.8
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 9.0e-155 550.4 319 79.3
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 9.0e-155 550.4 324 78.7
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 9.0e-155 550.4 322 78.0
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 1.5e-154 549.7 320 79.4
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 1.5e-154 549.7 322 78.0
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 1.5e-154 549.7 319 78.4
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 2.0e-154 549.3 324 78.4
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 2.0e-154 549.3 324 78.7
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 2.0e-154 549.3 326 77.0
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 3.4e-154 548.5 322 77.3
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 1.3e-153 546.6 322 78.0
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 1.3e-153 546.6 322 78.0
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 1.3e-153 546.6 319 79.3
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 1.3e-153 546.6 325 77.5
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 1.3e-153 546.6 323 77.4
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 1.3e-153 546.6 323 78.6
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 1.7e-153 546.2 324 77.5
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 1.7e-153 546.2 316 80.1
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 2.2e-153 545.8 323 78.0
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 2.2e-153 545.8 323 78.0
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 2.2e-153 545.8 320 78.8
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 5.0e-153 544.7 322 77.6
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 5.0e-153 544.7 323 77.7
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 6.5e-153 544.3 323 78.0
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 1.1e-152 543.5 323 77.7
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 1.1e-152 543.5 323 77.7
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 1.9e-152 542.7 324 77.2
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 2.5e-152 542.3 318 78.0
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 2.5e-152 542.3 322 76.4
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 4.2e-152 541.6 324 77.2
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 4.2e-152 541.6 323 78.0
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 5.5e-152 541.2 320 77.5
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 3.5e-151 538.5 276 93.1
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 3.5e-151 538.5 320 79.4
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 6.1e-151 537.7 319 78.7
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 6.1e-151 537.7 313 79.9
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 7.9e-151 537.3 324 76.5
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 1.8e-150 536.2 285 90.5
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 1.8e-150 536.2 322 77.6
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 6.7e-150 534.3 323 75.9
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 8.7e-150 533.9 320 78.4
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 2.5e-149 532.3 316 76.9
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 4.3e-149 531.6 320 77.5
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 2.2e-148 529.3 320 77.2
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 2.2e-148 529.3 343 71.7
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 4.8e-148 528.1 320 77.5
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 6.3e-148 527.7 320 76.9
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 8.2e-148 527.3 322 75.2
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 5.9e-146 521.2 328 74.4
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 1.4e-144 516.5 320 77.5
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 4.6e-143 511.5 317 74.1
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 1.8e-142 509.6 317 73.5
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 1.7e-140 503.1 311 72.7
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 4.8e-140 501.5 315 74.3
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 6.3e-140 501.1 317 72.6
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 2.2e-137 492.7 276 83.0
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 3.3e-133 478.8 290 79.0
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 1.7e-132 476.5 275 78.9
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 1.8e-131 473.0 314 67.8
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 3.5e-130 468.8 274 81.8
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 1.0e-129 467.2 275 79.3
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 1.1e-128 463.8 275 78.5
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 3.2e-128 462.2 314 65.6
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 3.3e-125 452.2 250 83.2
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 7.5e-125 451.1 292 75.0
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 4.8e-124 448.4 267 76.8
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 2.0e-122 443.0 315 63.2
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 1.3e-121 440.3 317 63.7
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 1.7e-113 413.3 279 73.1
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 5.0e-105 385.2 274 61.3
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 1.7e-97 360.1 316 59.2
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 5.2e-94 348.6 231 71.4
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 1.7e-92 343.6 331 48.9
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 1.2e-82 310.8 182 79.1
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 1.9e-80 303.5 337 44.8
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 3.0e-73 279.6 335 44.8
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 2.1e-63 246.9 151 76.8
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 2.8e-63 246.5 369 36.0
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 2.2e-60 236.9 331 38.7
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 9.3e-59 231.5 319 41.7
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 7.7e-29 132.1 90 65.6
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 1.5e-24 117.9 74 70.3
Lj1A682T15 Lonicera japonica HOM05D006124 ORTHO05D007854 1.7e-15 87.8 53 66.0
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 3.5e-13 80.1 89 55.1
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 1.5e-11 74.7 133 35.3
RcHm_v2.0_Chr5g0060231 Rosa chinensis HOM05D006124 ORTHO05D007854 1.0e-09 68.6 45 66.7
ECA233G1860 Erigeron canadensis HOM05D000013 ORTHO05D000011 1.1e-06 58.5 89 44.9


User provided reference genes

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