Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.03g147070 Amaranthus hybridus HOM05D000113 ORTHO05D015269 2.1e-131 472.6 286 100.0
AUR62029411 Chenopodium quinoa HOM05D000113 ORTHO05D007237 7.4e-36 155.2 247 42.5
AUR62003434 Chenopodium quinoa HOM05D000113 ORTHO05D007237 2.4e-34 150.2 247 42.5
Hund04309 Selenicereus undatus HOM05D000113 ORTHO05D015269 1.6e-33 147.5 241 41.1
GSVIVG01020822001 Vitis vinifera HOM05D000113 ORTHO05D007237 5.9e-33 145.6 257 39.3
Dinv01272 Davidia involucrata HOM05D000113 ORTHO05D007237 7.7e-33 145.2 268 38.1
Ciclev10033885m.g Citrus clementina HOM05D000113 ORTHO05D007237 1.2e-30 137.9 241 38.2
CAN.G212.12 Capsicum annuum HOM05D000113 ORTHO05D007237 1.6e-30 137.5 265 35.5
MBI01_g38586_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D015269 2.1e-30 137.1 249 39.4
Hma1.2p1_0571F.1_g180920 Hydrangea macrophylla HOM05D000113 ORTHO05D015269 6.1e-30 135.6 241 36.1
Oeu033551.1 Olea europaea HOM05D000113 ORTHO05D007237 8.0e-30 135.2 265 38.1
CiPaw.03G197700 Carya illinoinensis HOM05D000113 ORTHO05D007237 1.0e-29 134.8 262 36.3
Atru.chr6.2018 Acer truncatum HOM05D000113 ORTHO05D007237 1.8e-29 134.0 251 36.3
MD09G1146500 Malus domestica HOM05D000113 ORTHO05D007237 4.0e-29 132.9 244 36.9
Nitab4.5_0001552g0100 Nicotiana tabacum HOM05D000113 ORTHO05D007237 6.7e-29 132.1 257 35.0
DCAR_023041 Daucus carota HOM05D000113 ORTHO05D015269 1.2e-28 131.3 260 36.2
Nn7g38061 Nelumbo nucifera HOM05D000113 ORTHO05D007237 2.0e-28 130.6 256 36.3
Sopen07g023470 Solanum pennellii HOM05D000113 ORTHO05D007237 2.0e-28 130.6 269 34.2
ATR0763G161 Amborella trichopoda HOM05D000113 ORTHO05D007237 4.4e-28 129.4 243 37.0
Prupe.3G179000 Prunus persica HOM05D000113 ORTHO05D007237 4.4e-28 129.4 246 34.6
Solyc07g044930.3 Solanum lycopersicum HOM05D000113 ORTHO05D007237 4.4e-28 129.4 266 33.8
Cc05_g00880 Coffea canephora HOM05D000113 ORTHO05D007237 5.7e-28 129.0 257 35.4
Nitab4.5_0009366g0030 Nicotiana tabacum HOM05D000113 ORTHO05D007237 9.7e-28 128.3 262 33.2
QL08p045486 Quercus lobata HOM05D000113 ORTHO05D007237 9.7e-28 128.3 242 37.6
HanXRQChr06g0170911 Helianthus annuus HOM05D000113 ORTHO05D007237 2.2e-27 127.1 243 38.7
Sabra05G0157000 Salix brachista HOM05D000113 ORTHO05D007237 2.2e-27 127.1 252 37.7
TAR627G1069 Trochodendron aralioides HOM05D000113 ORTHO05D015269 3.7e-27 126.3 239 35.6
Gohir.A05G380800 Gossypium hirsutum HOM05D000113 ORTHO05D007237 8.2e-27 125.2 241 34.0
Potri.005G206500 Populus trichocarpa HOM05D000113 ORTHO05D007237 8.2e-27 125.2 265 37.4
Sc07g0004270 Simmondsia chinensis HOM05D000113 ORTHO05D007237 1.4e-26 124.4 240 35.4
MSTRG.14893 Avicennia marina HOM05D000113 ORTHO05D007237 2.4e-26 123.6 257 35.8
Peaxi162Scf00359g01116 Petunia axillaris HOM05D000113 ORTHO05D007237 3.1e-26 123.2 271 33.2
Gorai.012G039300 Gossypium raimondii HOM05D000113 ORTHO05D007237 5.3e-26 122.5 241 34.4
Rhsim09G0210000 Rhododendron simsii HOM05D000113 ORTHO05D007237 7.0e-26 122.1 232 36.6
unitig_0.g756 Utricularia gibba HOM05D000113 ORTHO05D007237 7.0e-26 122.1 240 33.8
CSS0031269 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D007237 9.1e-26 121.7 242 35.1
CDE02G4043 Ceratophyllum demersum HOM05D000113 ORTHO05D007237 1.2e-25 121.3 244 35.2
Eucgr.A02036 Eucalyptus grandis HOM05D000113 ORTHO05D007237 1.2e-25 121.3 248 33.5
Zm00001eb370170 Zea mays HOM05D000113 ORTHO05D007237 1.2e-25 121.3 241 32.8
Lsat_1_v5_gn_3_36540 Lactuca sativa HOM05D000113 ORTHO05D007237 1.6e-25 120.9 242 36.4
Thecc.01G166900 Theobroma cacao HOM05D000113 ORTHO05D007237 2.0e-25 120.6 243 32.1
CANSAT64G2939 Cannabis sativa HOM05D000113 ORTHO05D007237 3.5e-25 119.8 248 33.5
Phvul.008G196300 Phaseolus vulgaris HOM05D000113 ORTHO05D007237 3.5e-25 119.8 269 36.8
COL.COLO4_29885 Corchorus olitorius HOM05D000113 ORTHO05D007237 7.7e-25 118.6 236 33.9
THA.LOC104800815 Tarenaya hassleriana HOM05D000113 ORTHO05D007237 1.7e-24 117.5 240 32.1
Glyma.14G031600 Glycine max HOM05D000113 ORTHO05D007237 2.2e-24 117.1 268 36.2
Os01g0767700 Oryza sativa ssp. japonica HOM05D000113 ORTHO05D007237 3.8e-24 116.3 244 32.8
SGA_v2.0_scaffold73G24473 Striga asiatica HOM05D001610 ORTHO05D007237 5.0e-24 115.9 246 33.3
Actinidia15505 Actinidia chinensis HOM05D000113 ORTHO05D007237 1.5e-23 114.4 267 32.2
VMungo0647G0573 Vigna mungo HOM05D000113 ORTHO05D007237 1.9e-23 114.0 269 33.1
ClCG07G010790 Citrullus lanatus HOM05D000113 ORTHO05D007237 2.5e-23 113.6 233 35.2
Lalb_Chr17g0348141 Lupinus albus HOM05D000113 ORTHO05D007237 2.5e-23 113.6 245 35.1
arahy.Tifrunner.gnm1.ann1.JYPQ9N Arachis hypogaea HOM05D000113 ORTHO05D007237 4.2e-23 112.8 259 34.7
SalBow7G3963 Salvia bowleyana HOM05D000113 ORTHO05D007237 7.2e-23 112.1 256 34.8
ECA246G4989 Erigeron canadensis HOM05D001982 ORTHO05D007237 9.4e-23 111.7 241 36.1
HPP92_000953 Vanilla planifolia HOM05D000113 ORTHO05D007237 2.7e-22 110.2 253 30.8
Psat2g018200 Pisum sativum HOM05D000113 ORTHO05D007237 6.1e-22 109.0 244 33.6
LjContig00049g0026408 Lotus japonicus HOM05D000113 ORTHO05D007237 8.0e-22 108.6 264 33.3
DCAR_016938 Daucus carota HOM05D000113 ORTHO05D015269 1.0e-21 108.2 249 33.7
TWI23G1117 Tripterygium wilfordii HOM05D000113 ORTHO05D007237 1.0e-21 108.2 264 32.6
arahy.Tifrunner.gnm1.ann1.UENS5B Arachis hypogaea HOM05D000113 ORTHO05D007237 1.4e-21 107.8 257 33.1
Glyma.02G282700 Glycine max HOM05D000113 ORTHO05D007237 1.4e-21 107.8 266 34.2
Lj8A98T44 Lonicera japonica HOM05D000113 ORTHO05D007237 1.8e-21 107.5 216 35.2
Aqoxy1G01493 Aquilegia oxysepala HOM05D000113 ORTHO05D007237 3.0e-21 106.7 258 31.4
Migut.M00079 Erythranthe guttata HOM05D000113 ORTHO05D007237 4.0e-21 106.3 239 35.1
AL4G25730 Arabidopsis lyrata HOM05D000113 ORTHO05D007237 6.8e-21 105.5 255 29.4
BcaB02g10343 Brassica carinata HOM05D000113 ORTHO05D007237 8.8e-21 105.1 258 31.0
CsaV3_4G007530 Cucumis sativus L. HOM05D000113 ORTHO05D007237 8.8e-21 105.1 266 33.1
TPR.G8771 Trifolium pratense HOM05D000113 ORTHO05D007237 8.8e-21 105.1 253 32.4
Ca_06237_v3 Cicer arietinum L. HOM05D000113 ORTHO05D007237 2.6e-20 103.6 259 32.8
Thhalv10016152m.g Eutrema salsugineum HOM05D000113 ORTHO05D007237 5.7e-20 102.4 254 29.5
TAR626G1249 Trochodendron aralioides HOM05D000113 ORTHO05D007237 5.7e-20 102.4 220 33.2
CARHR124270 Cardamine hirsuta HOM05D000113 ORTHO05D007237 9.8e-20 101.7 254 29.9
AT2G30800 Arabidopsis thaliana HOM05D000113 ORTHO05D007237 2.2e-19 100.5 255 28.6
A04p23480 Brassica napus HOM05D000113 ORTHO05D007237 3.7e-19 99.8 255 29.4
HanXRQChr17g0541351 Helianthus annuus HOM05D000113 ORTHO05D007237 3.7e-19 99.8 270 42.2
BcaB06g28386 Brassica carinata HOM05D000113 ORTHO05D007237 6.3e-19 99.0 255 29.0
A05p14770 Brassica napus HOM05D000113 ORTHO05D007237 6.3e-19 99.0 218 29.4
BraA04t17875Z Brassica rapa HOM05D000113 ORTHO05D007237 6.3e-19 99.0 255 29.4
BraA05t20407Z Brassica rapa HOM05D000113 ORTHO05D007237 8.3e-19 98.6 218 29.4
Dinv24631 Davidia involucrata HOM05D000113 ORTHO05D007237 1.1e-18 98.2 197 36.0
Thhalv10006566m.g Eutrema salsugineum HOM05D000113 ORTHO05D007237 1.4e-18 97.8 243 28.8
Pp3c11_11510 Physcomitrium patens HOM05D000113 ORTHO05D007237 2.4e-18 97.1 249 30.5
RcHm_v2.0_Chr2g0152461 Rosa chinensis HOM05D000113 ORTHO05D007237 2.4e-18 97.1 241 29.5
Cpa.g.sc3138.1 Carica papaya HOM05D000113 ORTHO05D015269 3.1e-18 96.7 179 36.9
Carub.0004s1201 Capsella rubella HOM05D000113 ORTHO05D007237 4.1e-18 96.3 254 28.0
C04p59790 Brassica napus HOM05D000113 ORTHO05D007237 5.4e-18 95.9 255 29.4
BolC4t27489H Brassica oleracea HOM05D000113 ORTHO05D007237 5.4e-18 95.9 255 29.4
Aa31LG5G6060 Aethionema arabicum HOM05D000113 ORTHO05D007237 1.2e-17 94.7 253 30.0
SEGI_34167 Sequoiadendron giganteum HOM05D000113 ORTHO05D015269 1.2e-17 94.7 199 31.7
Medtr5g090430 Medicago truncatula HOM05D000113 ORTHO05D007237 2.0e-17 94.0 257 31.1
Oeu012355.1 Olea europaea HOM05D000113 ORTHO05D007237 2.0e-17 94.0 212 34.0
Gohir.D04G034800 Gossypium hirsutum HOM05D000113 ORTHO05D007237 2.7e-17 93.6 241 30.3
PSO210G5614 Papaver somniferum HOM05D000113 ORTHO05D007237 2.7e-17 93.6 258 32.6
PSO223G0056 Papaver somniferum HOM05D000113 ORTHO05D007237 2.7e-17 93.6 260 32.3
Sp1g05400 Schrenkiella parvula HOM05D000113 ORTHO05D007237 3.5e-17 93.2 254 28.3
AT1G06670 Arabidopsis thaliana HOM05D000113 ORTHO05D007237 1.3e-16 91.3 254 35.4
AagrBONN_evm.TU.Sc2ySwM_344.1049 Anthoceros agrestis HOM05D000113 ORTHO05D007237 2.2e-16 90.5 253 32.4
HanXRQChr17g0541371 Helianthus annuus HOM05D000113 ORTHO05D007237 5.0e-16 89.4 273 28.2
BolC5t29258H Brassica oleracea HOM05D000113 ORTHO05D007237 8.5e-16 88.6 251 26.7
Mapoly0007s0204 Marchantia polymorpha HOM05D000113 ORTHO05D007237 2.5e-15 87.0 249 30.1
C05p04860 Brassica napus HOM05D000113 ORTHO05D007237 4.2e-15 86.3 251 26.3
Carub.0001s0600 Capsella rubella HOM05D000113 ORTHO05D007237 7.2e-15 85.5 251 28.7
AL1G16680 Arabidopsis lyrata HOM05D000113 ORTHO05D007237 9.5e-15 85.1 248 33.5
Duzib147G1700 Durio zibethinus HOM05D000113 ORTHO05D007237 2.1e-14 84.0 124 38.7
Sed0010586 Sechium edule HOM05D000113 ORTHO05D007237 4.7e-14 82.8 133 39.8
SHI10522 Sapria himalayana HOM05D000113 ORTHO05D015269 1.4e-13 81.3 180 30.6
Cfa023019 Carpinus fangiana HOM05D000113 ORTHO05D007237 8.8e-13 78.6 124 42.7
Phvul.006G027200 Phaseolus vulgaris HOM05D000113 ORTHO05D007237 8.8e-13 78.6 126 38.1
FAN02G0673 Fragaria x ananassa HOM05D000113 ORTHO05D007237 2.6e-12 77.0 241 29.0
FvH4_6g38870 Fragaria vesca HOM05D000113 ORTHO05D007237 9.8e-12 75.1 241 28.6
vmacro10163 Vaccinium macrocarpon HOM05D000113 ORTHO05D007237 1.3e-11 74.7 220 30.0
FAN09G2677 Fragaria x ananassa HOM05D000113 ORTHO05D007237 1.7e-11 74.3 241 28.6
FAN05G5230 Fragaria x ananassa HOM05D000113 ORTHO05D007237 4.9e-11 72.8 221 28.5
FAN14G0921 Fragaria x ananassa HOM05D000113 ORTHO05D007237 4.9e-11 72.8 221 28.5
TAR626G1057 Trochodendron aralioides HOM05D000113 ORTHO05D015269 3.5e-09 66.6 98 38.8
CARHR006350 Cardamine hirsuta HOM05D000113 ORTHO05D007237 3.8e-08 63.2 231 24.2
CBR_g50388 Chara braunii HOM05D000113 ORTHO05D007237 5.0e-08 62.8 223 26.0


User provided reference genes

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