Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.03g143010 Amaranthus hybridus HOM05D006139 ORTHO05D007681 1.2e-55 219.5 109 100.0
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 1.1e-24 116.7 128 50.8
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 1.1e-24 116.7 128 50.8
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.5e-24 116.3 128 50.8
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 4.2e-24 114.8 127 48.8
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 4.2e-24 114.8 128 49.2
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 7.2e-24 114.0 73 75.3
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 7.2e-24 114.0 128 49.2
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 9.5e-24 113.6 129 45.7
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 9.5e-24 113.6 129 45.7
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 9.5e-24 113.6 128 46.9
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 1.2e-23 113.2 128 46.9
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 1.2e-23 113.2 125 48.0
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 2.1e-23 112.5 128 45.3
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 2.1e-23 112.5 128 45.3
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 2.1e-23 112.5 128 45.3
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 4.7e-23 111.3 128 44.5
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 4.7e-23 111.3 128 44.5
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 4.7e-23 111.3 128 46.9
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 8.0e-23 110.5 128 46.9
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 8.0e-23 110.5 128 46.9
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 1.4e-22 109.8 128 43.8
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 1.4e-22 109.8 125 48.8
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 2.3e-22 109.0 128 43.8
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 3.0e-22 108.6 128 45.3
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 3.0e-22 108.6 128 44.5
Atru.chr2.2052 Acer truncatum HOM05D006139 ORTHO05D007681 4.0e-22 108.2 132 43.2
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 4.0e-22 108.2 128 45.3
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 8.9e-22 107.1 128 47.7
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 1.5e-21 106.3 128 43.8
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 2.0e-21 105.9 128 45.3
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 2.0e-21 105.9 128 45.3
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 5.7e-21 104.4 125 44.0
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 5.7e-21 104.4 128 46.1
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 9.8e-21 103.6 128 44.5
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 1.3e-20 103.2 125 43.2
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 1.3e-20 103.2 125 43.2
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 1.7e-20 102.8 128 43.0
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 2.2e-20 102.4 88 55.7
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 3.7e-20 101.7 132 40.9
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 3.7e-20 101.7 127 44.1
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 3.7e-20 101.7 137 42.3
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 4.9e-20 101.3 133 40.6
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 6.3e-20 100.9 125 42.4
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 6.3e-20 100.9 125 44.0
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 8.3e-20 100.5 125 43.2
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 1.1e-19 100.1 128 45.3
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 1.1e-19 100.1 124 46.0
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 1.4e-19 99.8 129 45.0
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 1.4e-19 99.8 131 40.5
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 2.4e-19 99.0 129 44.2
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 2.4e-19 99.0 128 43.8
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 2.4e-19 99.0 125 47.2
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 3.1e-19 98.6 139 44.6
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 3.1e-19 98.6 128 42.2
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 4.1e-19 98.2 129 44.2
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 7.0e-19 97.4 128 43.0
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 7.0e-19 97.4 128 43.0
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.0e-18 95.9 128 44.5
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 2.0e-18 95.9 130 43.1
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 2.7e-18 95.5 125 41.6
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 2.7e-18 95.5 128 42.2
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 2.7e-18 95.5 150 40.7
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 3.5e-18 95.1 128 40.6
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 3.5e-18 95.1 129 40.3
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 4.5e-18 94.7 139 40.3
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 7.8e-18 94.0 125 44.8
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 1.3e-17 93.2 124 38.7
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.7e-17 92.8 128 43.0
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 2.9e-17 92.0 126 44.4
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 5.0e-17 91.3 128 41.4
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 1.5e-16 89.7 130 43.8
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 5.6e-16 87.8 128 41.4
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 2.1e-15 85.9 128 39.1
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 1.4e-14 83.2 129 39.5
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 1.8e-14 82.8 128 37.5
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 4.0e-14 81.6 126 41.3
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 1.2e-13 80.1 111 41.4
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 1.2e-13 80.1 101 44.6
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 2.0e-13 79.3 135 38.5
Ca_11423_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 7.5e-13 77.4 124 37.9
Eucgr.L02132 Eucalyptus grandis HOM05D006139 ORTHO05D007681 1.7e-12 76.3 55 67.3
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 2.2e-12 75.9 86 47.7
DCAR_005495 Daucus carota HOM05D006139 ORTHO05D007681 4.9e-12 74.7 106 40.6
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 8.3e-12 73.9 56 58.9
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 5.4e-11 71.2 109 38.5
AUR62043732 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.3e-09 66.6 41 75.6
Hund20183 Selenicereus undatus HOM05D006139 ORTHO05D007681 3.0e-09 65.5 41 70.7
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 6.6e-09 64.3 99 36.4
TPR.G8868 Trifolium pratense HOM05D006139 ORTHO05D007681 1.6e-07 59.7 41 63.4
FAN22G0061 Fragaria x ananassa HOM05D006139 ORTHO05D007681 6.2e-07 57.8 58 51.7
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 6.2e-07 57.8 38 68.4
unitig_578.g15953 Utricularia gibba HOM05D006139 ORTHO05D007681 5.2e-06 54.7 100 36.0


User provided reference genes

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