Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G7550 Aethionema arabicum HOM05D004763 ORTHO05D007492 4.5e-283 977.2 487 100.0
Aa31LG8G7590 Aethionema arabicum HOM05D004763 ORTHO05D007492 2.9e-48 197.2 555 38.2
Thhalv10020214m.g Eutrema salsugineum HOM05D004763 ORTHO05D007492 2.0e-41 174.5 468 37.0
AL3G34700 Arabidopsis lyrata HOM05D004763 ORTHO05D007492 5.9e-41 172.9 546 35.0
BcaC05g28282 Brassica carinata HOM05D004763 ORTHO05D007492 5.9e-41 172.9 546 34.4
C05p43300 Brassica napus HOM05D004763 ORTHO05D007492 7.7e-41 172.6 546 34.4
A05p28000 Brassica napus HOM05D004763 ORTHO05D007492 1.3e-40 171.8 551 34.5
Carub.0003s2074 Capsella rubella HOM05D004763 ORTHO05D007492 1.7e-40 171.4 546 34.8
Sp3g18800 Schrenkiella parvula HOM05D004763 ORTHO05D007492 2.2e-40 171.0 542 33.6
BolC5t33062H Brassica oleracea HOM05D004763 ORTHO05D007492 2.9e-40 170.6 546 34.2
AT3G20780 Arabidopsis thaliana HOM05D004763 ORTHO05D007492 3.8e-40 170.2 546 34.6
BcaB06g26148 Brassica carinata HOM05D004763 ORTHO05D007492 8.5e-40 169.1 544 33.6
COL.COLO4_09893 Corchorus olitorius HOM05D004763 ORTHO05D007492 8.5e-40 169.1 471 35.7
BraA05t21683Z Brassica rapa HOM05D004763 ORTHO05D007492 1.1e-39 168.7 559 34.0
THA.LOC104816912 Tarenaya hassleriana HOM05D004763 ORTHO05D007492 3.6e-38 163.7 466 36.3
Ciclev10014511m.g Citrus clementina HOM05D004763 ORTHO05D007492 7.9e-38 162.5 466 34.8
Sopen01g009200 Solanum pennellii HOM05D004763 ORTHO05D007492 2.6e-36 157.5 468 33.3
Dinv36304 Davidia involucrata HOM05D004763 ORTHO05D007492 3.3e-36 157.1 465 35.5
PGR102G0325 Punica granatum HOM05D004763 ORTHO05D007492 3.3e-36 157.1 465 34.8
Solyc01g014490.4 Solanum lycopersicum HOM05D004763 ORTHO05D007492 3.3e-36 157.1 468 33.3
Sc09g0000480 Simmondsia chinensis HOM05D004763 ORTHO05D007492 5.7e-36 156.4 468 34.0
Actinidia39377 Actinidia chinensis HOM05D004763 ORTHO05D007492 1.7e-35 154.8 514 31.7
Nn7g36058 Nelumbo nucifera HOM05D004763 ORTHO05D007492 1.7e-35 154.8 468 34.4
GSVIVG01025336001 Vitis vinifera HOM05D004763 ORTHO05D007492 2.8e-35 154.1 466 34.3
MELO3C014639.2 Cucumis melo HOM05D004763 ORTHO05D007492 3.7e-35 153.7 468 34.4
Prupe.6G018600 Prunus persica HOM05D004763 ORTHO05D007492 4.8e-35 153.3 468 34.4
Sed0013957 Sechium edule HOM05D004763 ORTHO05D007492 4.8e-35 153.3 468 34.4
Aqoxy1G00185 Aquilegia oxysepala HOM05D004763 ORTHO05D007492 6.3e-35 152.9 465 33.3
CSS0044360 Camellia sinensis var. sinensis HOM05D004763 ORTHO05D007492 6.3e-35 152.9 471 34.2
Haze_23044 Corylus avellana HOM05D004763 ORTHO05D007492 6.3e-35 152.9 549 32.4
Thecc.09G223100 Theobroma cacao HOM05D004763 ORTHO05D007492 1.1e-34 152.1 469 34.1
CsaV3_4G023800 Cucumis sativus L. HOM05D004763 ORTHO05D007492 1.4e-34 151.8 468 34.2
FAN16G3272 Fragaria x ananassa HOM05D004763 ORTHO05D007492 1.4e-34 151.8 466 33.7
Atru.chr3.2503 Acer truncatum HOM05D004763 ORTHO05D007492 1.8e-34 151.4 466 33.7
FvH4_3g43550 Fragaria vesca HOM05D004763 ORTHO05D007492 3.1e-34 150.6 468 33.8
Gohir.D13G219100 Gossypium hirsutum HOM05D004763 ORTHO05D007492 3.1e-34 150.6 468 34.0
arahy.Tifrunner.gnm1.ann1.X75IXN Arachis hypogaea HOM05D004763 ORTHO05D007492 5.3e-34 149.8 557 29.8
Gorai.013G250000 Gossypium raimondii HOM05D004763 ORTHO05D007492 5.3e-34 149.8 468 34.0
Lalb_Chr14g0372291 Lupinus albus HOM05D004763 ORTHO05D007492 5.3e-34 149.8 463 33.9
MD03G1021100 Malus domestica HOM05D004763 ORTHO05D007492 5.3e-34 149.8 468 34.2
Cc01_g04070 Coffea canephora HOM05D004763 ORTHO05D007492 6.9e-34 149.4 468 33.8
TAR623G1126 Trochodendron aralioides HOM05D004763 ORTHO05D007492 6.9e-34 149.4 466 33.5
arahy.Tifrunner.gnm1.ann1.P0K6XU Arachis hypogaea HOM05D004763 ORTHO05D007492 9.1e-34 149.1 537 31.1
CANSAT54G1729 Cannabis sativa HOM05D004763 ORTHO05D007492 9.1e-34 149.1 471 32.9
CDE04G0998 Ceratophyllum demersum HOM05D004763 ORTHO05D007492 1.2e-33 148.7 468 33.3
arahy.Tifrunner.gnm1.ann1.VYK1P0 Arachis hypogaea HOM05D004763 ORTHO05D007492 1.5e-33 148.3 537 30.9
Gohir.A13G215400 Gossypium hirsutum HOM05D004763 ORTHO05D007492 1.5e-33 148.3 468 33.8
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 1.5e-33 148.3 465 34.0
arahy.Tifrunner.gnm1.ann1.GN3GFY Arachis hypogaea HOM05D004763 ORTHO05D007492 2.0e-33 147.9 537 30.9
Lj3g0020649 Lotus japonicus HOM05D004763 ORTHO05D007492 2.0e-33 147.9 471 32.9
Potri.003G211000 Populus trichocarpa HOM05D004763 ORTHO05D007492 2.0e-33 147.9 466 33.7
Potri.T085401 Populus trichocarpa HOM05D004763 ORTHO05D007492 2.0e-33 147.9 466 33.7
RcHm_v2.0_Chr5g0078101 Rosa chinensis HOM05D004763 ORTHO05D007492 3.4e-33 147.1 466 33.3
Hma1.2p1_1169F.1_g263300 Hydrangea macrophylla HOM05D004763 ORTHO05D007492 4.5e-33 146.7 466 33.3
Rhsim01G0189300 Rhododendron simsii HOM05D004763 ORTHO05D007492 5.9e-33 146.4 483 33.3
Sabra03G0153800 Salix brachista HOM05D004763 ORTHO05D007492 5.9e-33 146.4 463 33.3
Sabra03G0156000 Salix brachista HOM05D004763 ORTHO05D007492 5.9e-33 146.4 463 33.3
HanXRQChr14g0451781 Helianthus annuus HOM05D004763 ORTHO05D007492 7.7e-33 146.0 468 33.3
Manes.14G014500 Manihot esculenta HOM05D004763 ORTHO05D007492 7.7e-33 146.0 466 33.0
Duzib150G1218 Durio zibethinus HOM05D004763 ORTHO05D007492 1.3e-32 145.2 484 33.3
EL10Ac4g10318 Beta vulgaris HOM05D004763 ORTHO05D007492 1.7e-32 144.8 467 32.3
Glyma.13G342900 Glycine max HOM05D004763 ORTHO05D007492 1.7e-32 144.8 466 33.0
ECA238G4453 Erigeron canadensis HOM05D004763 ORTHO05D007492 2.2e-32 144.4 546 30.8
Eucgr.B03662 Eucalyptus grandis HOM05D004763 ORTHO05D007492 2.2e-32 144.4 469 31.8
Medtr2g098510 Medicago truncatula HOM05D004763 ORTHO05D007492 2.2e-32 144.4 465 33.3
TWI34G0672 Tripterygium wilfordii HOM05D004763 ORTHO05D007492 2.2e-32 144.4 546 31.9
Aqoxy381s001 Aquilegia oxysepala HOM05D004763 ORTHO05D007492 2.9e-32 144.1 473 33.4
QL01p006243 Quercus lobata HOM05D004763 ORTHO05D007492 2.9e-32 144.1 468 32.9
SGA_v2.0_scaffold1G00797 Striga asiatica HOM05D004763 ORTHO05D007492 2.9e-32 144.1 469 32.2
Nitab4.5_0006575g0020 Nicotiana tabacum HOM05D004763 ORTHO05D007492 8.5e-32 142.5 466 33.0
Peaxi162Scf00773g00119 Petunia axillaris HOM05D004763 ORTHO05D007492 8.5e-32 142.5 475 33.1
Phvul.005G150500 Phaseolus vulgaris HOM05D004763 ORTHO05D007492 1.1e-31 142.1 466 33.3
Psat5g288480 Pisum sativum HOM05D004763 ORTHO05D007492 1.4e-31 141.7 465 32.7
CiPaw.14G125100 Carya illinoinensis HOM05D004763 ORTHO05D007492 1.9e-31 141.4 546 31.9
Hund22081 Selenicereus undatus HOM05D004763 ORTHO05D007492 1.9e-31 141.4 467 32.3
VMungo1080G1755 Vigna mungo HOM05D004763 ORTHO05D007492 3.2e-31 140.6 466 33.0
Ca_01270_v3 Cicer arietinum L. HOM05D004763 ORTHO05D007492 5.5e-31 139.8 480 32.5
ATR0605G091 Amborella trichopoda HOM05D004763 ORTHO05D007492 7.2e-31 139.4 465 32.5
Cpa.g.sc84.111 Carica papaya HOM05D004763 ORTHO05D007492 7.2e-31 139.4 574 31.4
PSO339G3791 Papaver somniferum HOM05D004763 ORTHO05D007492 7.2e-31 139.4 468 33.5
AUR62019250 Chenopodium quinoa HOM05D004763 ORTHO05D007492 9.4e-31 139.0 466 32.0
CARHR096610 Cardamine hirsuta HOM05D004763 ORTHO05D007492 1.6e-30 138.3 544 32.2
Migut.D00558 Erythranthe guttata HOM05D004763 ORTHO05D007492 1.6e-30 138.3 466 32.2
HPP92_020536 Vanilla planifolia HOM05D004763 ORTHO05D007492 8.8e-29 132.5 469 32.6
DCAR_024396 Daucus carota HOM05D004763 ORTHO05D007492 4.4e-28 130.2 444 31.5
Os09g0279600 Oryza sativa ssp. japonica HOM05D004763 ORTHO05D007492 1.7e-27 128.3 467 31.7
Hma1.2p1_1169F.1_g263310 Hydrangea macrophylla HOM05D004763 ORTHO05D007492 2.2e-27 127.9 378 33.6
Nitab4.5_0003069g0050 Nicotiana tabacum HOM05D004763 ORTHO05D007492 2.8e-27 127.5 476 31.7
Lsat_1_v5_gn_2_101121 Lactuca sativa HOM05D004763 ORTHO05D007492 8.2e-27 125.9 555 29.2
Ah.04g161760 Amaranthus hybridus HOM05D004763 ORTHO05D007492 1.8e-26 124.8 465 31.0
Pp3c22_12720 Physcomitrium patens HOM05D004763 ORTHO05D007492 7.0e-26 122.9 462 30.7
Mapoly0042s0060 Marchantia polymorpha HOM05D004763 ORTHO05D007492 4.5e-25 120.2 460 30.9
AagrBONN_evm.TU.Sc2ySwM_344.3405 Anthoceros agrestis HOM05D004763 ORTHO05D007492 1.7e-24 118.2 466 28.8
CBR_g31022 Chara braunii HOM05D004763 ORTHO05D007492 1.7e-24 118.2 468 30.3
Zm00001eb308780 Zea mays HOM05D004763 ORTHO05D007492 2.9e-24 117.5 327 34.6
FAN11G2145 Fragaria x ananassa HOM05D004763 ORTHO05D007492 5.5e-23 113.2 481 29.5
Lj4g0010878 Lotus japonicus HOM05D004763 ORTHO05D007492 7.2e-23 112.8 446 30.5
SMO116G0144 Selaginella moellendorffii HOM05D004763 ORTHO05D007492 1.6e-22 111.7 460 30.0
SEGI_32015 Sequoiadendron giganteum HOM05D004763 ORTHO05D007492 1.5e-20 105.1 348 30.7
FAN11G0713 Fragaria x ananassa HOM05D004763 ORTHO05D007492 8.2e-19 99.4 481 27.9
Lsat_1_v5_gn_1_127001 Lactuca sativa HOM05D004763 ORTHO05D007492 2.4e-18 97.8 448 27.7
ClCG02G023620 Citrullus lanatus HOM05D004763 ORTHO05D007492 2.2e-16 91.3 268 34.3
PGSC0003DMG401029907 Solanum tuberosum HOM05D004763 ORTHO05D007492 5.0e-16 90.1 271 33.9
CAN.G646.1 Capsicum annuum HOM05D004763 ORTHO05D007492 3.2e-15 87.4 268 31.3
FAN21G2003 Fragaria x ananassa HOM05D004763 ORTHO05D007492 3.2e-15 87.4 434 29.3
CAN.G442.1 Capsicum annuum HOM05D004763 ORTHO05D007492 9.4e-15 85.9 156 41.7
MBI01_g15753_MAGBIO Magnolia biondii HOM05D004763 ORTHO05D007492 2.1e-14 84.7 268 33.2
Lju1319A4T15 Lonicera japonica HOM05D004763 ORTHO05D007492 3.6e-14 84.0 234 35.0
PGSC0003DMG402029907 Solanum tuberosum HOM05D004763 ORTHO05D007492 4.7e-14 83.6 155 41.3
MCO09G243 Micromonas commoda HOM05D004763 ORTHO05D007492 8.3e-11 72.8 451 24.6
Lj1C366G5 Lonicera japonica HOM05D004763 ORTHO05D007492 1.6e-09 68.6 132 43.2
Lj1A366T12 Lonicera japonica HOM05D004763 ORTHO05D007492 3.5e-09 67.4 132 42.4
Oeu036968.1 Olea europaea HOM05D004763 ORTHO05D007492 8.6e-08 62.8 83 42.2
Cre01.g019750 Chlamydomonas reinhardtii HOM05D004763 ORTHO05D007492 2.1e-06 58.2 480 23.5


User provided reference genes

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