Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G17320 Aethionema arabicum HOM05D006183 ORTHO05D007844 0.0e+00 1177.2 654 100.0
AT2G20330 Arabidopsis thaliana HOM05D006183 ORTHO05D007844 8.7e-290 1000.0 658 81.2
Thhalv10001927m.g Eutrema salsugineum HOM05D006183 ORTHO05D007844 1.6e-288 995.7 651 80.2
Sp3g33570 Schrenkiella parvula HOM05D006183 ORTHO05D007844 8.4e-285 983.4 653 79.3
AL3G53280 Arabidopsis lyrata HOM05D006183 ORTHO05D007844 1.1e-284 983.0 660 79.5
BcaB03g16820 Brassica carinata HOM05D006183 ORTHO05D007844 8.7e-282 973.4 653 79.9
CARHR110860 Cardamine hirsuta HOM05D006183 ORTHO05D007844 1.1e-281 973.0 654 80.7
Carub.0003s3467 Capsella rubella HOM05D006183 ORTHO05D007844 1.9e-281 972.2 660 80.6
A07p00380 Brassica napus HOM05D006183 ORTHO05D007844 1.7e-269 932.6 642 75.1
BraA07t27830Z Brassica rapa HOM05D006183 ORTHO05D007844 3.8e-269 931.4 642 75.1
THA.LOC104814536 Tarenaya hassleriana HOM05D006183 ORTHO05D007844 3.2e-268 928.3 662 79.9
BcaC06g36716 Brassica carinata HOM05D006183 ORTHO05D007844 1.3e-266 922.9 653 73.7
BolC7t40519H Brassica oleracea HOM05D006183 ORTHO05D007844 1.3e-266 922.9 653 73.7
C07p00800 Brassica napus HOM05D006183 ORTHO05D007844 3.0e-266 921.8 654 76.5
Hma1.2p1_2051F.1_g312550 Hydrangea macrophylla HOM05D006183 ORTHO05D007844 3.4e-254 881.7 665 67.4
Thecc.01G248600 Theobroma cacao HOM05D006183 ORTHO05D007844 5.1e-250 867.8 656 69.7
Sopen06g002920 Solanum pennellii HOM05D006183 ORTHO05D007844 1.5e-249 866.3 650 67.1
PGR044G1356 Punica granatum HOM05D006183 ORTHO05D007844 7.4e-249 864.0 661 67.6
Rhsim13G0040400 Rhododendron simsii HOM05D006183 ORTHO05D007844 9.7e-249 863.6 666 68.8
Cpa.g.sc87.44 Carica papaya HOM05D006183 ORTHO05D007844 2.8e-248 862.1 664 66.6
Duzib133G1169 Durio zibethinus HOM05D006183 ORTHO05D007844 2.8e-248 862.1 664 67.0
QL09p042323 Quercus lobata HOM05D006183 ORTHO05D007844 8.2e-248 860.5 667 65.7
MELO3C012834.2 Cucumis melo HOM05D006183 ORTHO05D007844 1.4e-247 859.8 666 67.6
Lj1A75T45 Lonicera japonica HOM05D006183 ORTHO05D007844 3.1e-247 858.6 650 68.2
Prupe.8G213600 Prunus persica HOM05D006183 ORTHO05D007844 3.1e-247 858.6 639 70.1
Gorai.001G237200 Gossypium raimondii HOM05D006183 ORTHO05D007844 6.9e-247 857.4 664 67.3
CsaV3_3G028460 Cucumis sativus L. HOM05D006183 ORTHO05D007844 2.0e-246 855.9 665 67.2
Nitab4.5_0009671g0010 Nicotiana tabacum HOM05D006183 ORTHO05D007844 2.6e-246 855.5 660 66.1
DCAR_018527 Daucus carota HOM05D006183 ORTHO05D007844 3.4e-246 855.1 645 66.4
Gohir.D07G209800 Gossypium hirsutum HOM05D006183 ORTHO05D007844 3.4e-246 855.1 649 71.6
CSS0020724 Camellia sinensis var. sinensis HOM05D006183 ORTHO05D007844 4.5e-246 854.7 687 65.8
PGSC0003DMG400014711 Solanum tuberosum HOM05D006183 ORTHO05D007844 4.5e-246 854.7 652 66.1
Nitab4.5_0000326g0320 Nicotiana tabacum HOM05D006183 ORTHO05D007844 1.7e-245 852.8 648 67.3
Haze_24717 Corylus avellana HOM05D006183 ORTHO05D007844 2.9e-245 852.0 672 66.1
MD10G1174900 Malus domestica HOM05D006183 ORTHO05D007844 3.8e-245 851.7 639 68.9
Gohir.A07G203800 Gossypium hirsutum HOM05D006183 ORTHO05D007844 5.0e-245 851.3 646 70.9
vmacro02713 Vaccinium macrocarpon HOM05D006183 ORTHO05D007844 6.5e-245 850.9 666 66.2
Ciclev10019299m.g Citrus clementina HOM05D006183 ORTHO05D007844 1.4e-244 849.7 646 71.5
ECA248G2561 Erigeron canadensis HOM05D006183 ORTHO05D007844 1.4e-244 849.7 646 72.3
Cfa002493 Carpinus fangiana HOM05D006183 ORTHO05D007844 2.5e-244 849.0 673 65.2
Lsat_1_v5_gn_5_180141 Lactuca sativa HOM05D006183 ORTHO05D007844 2.5e-244 849.0 665 65.0
Ca_08753_v3 Cicer arietinum L. HOM05D006183 ORTHO05D007844 3.2e-244 848.6 647 69.9
Hund18298 Selenicereus undatus HOM05D006183 ORTHO05D007844 1.2e-243 846.7 659 65.6
Aqoxy5G00112 Aquilegia oxysepala HOM05D006183 ORTHO05D007844 6.1e-243 844.3 653 69.4
Sed0027453 Sechium edule HOM05D006183 ORTHO05D007844 6.1e-243 844.3 669 67.4
TPR.G20058 Trifolium pratense HOM05D006183 ORTHO05D007844 6.1e-243 844.3 646 70.1
MSTRG.18360 Avicennia marina HOM05D006183 ORTHO05D007844 3.0e-242 842.0 679 65.7
EL10Ac7g17706 Beta vulgaris HOM05D006183 ORTHO05D007844 2.6e-241 839.0 662 66.0
Cc01_g17710 Coffea canephora HOM05D006183 ORTHO05D007844 4.4e-241 838.2 673 64.5
VMungo1383G1346 Vigna mungo HOM05D006183 ORTHO05D007844 2.2e-240 835.9 641 67.6
ClCG07G001450 Citrullus lanatus HOM05D006183 ORTHO05D007844 2.8e-240 835.5 678 65.6
Dinv43057 Davidia involucrata HOM05D006183 ORTHO05D007844 2.8e-240 835.5 710 63.0
FAN15G0492 Fragaria x ananassa HOM05D006183 ORTHO05D007844 4.8e-240 834.7 651 65.7
TAR636G3003 Trochodendron aralioides HOM05D006183 ORTHO05D007844 1.1e-239 833.6 663 65.8
Atru.chr5.1959 Acer truncatum HOM05D006183 ORTHO05D007844 1.4e-239 833.2 664 65.7
Medtr7g098900 Medicago truncatula HOM05D006183 ORTHO05D007844 1.4e-239 833.2 646 68.1
Phvul.001G166600 Phaseolus vulgaris HOM05D006183 ORTHO05D007844 1.4e-239 833.2 641 67.2
RcHm_v2.0_Chr6g0286091 Rosa chinensis HOM05D006183 ORTHO05D007844 1.4e-239 833.2 652 66.7
CiPaw.04G191000 Carya illinoinensis HOM05D006183 ORTHO05D007844 1.8e-239 832.8 654 68.2
arahy.Tifrunner.gnm1.ann1.73B1UV Arachis hypogaea HOM05D006183 ORTHO05D007844 1.6e-238 829.7 647 68.9
arahy.Tifrunner.gnm1.ann1.P69TYL Arachis hypogaea HOM05D006183 ORTHO05D007844 2.6e-238 828.9 651 68.5
Glyma.19G169500 Glycine max HOM05D006183 ORTHO05D007844 2.6e-238 828.9 641 67.7
Psat3g051320 Pisum sativum HOM05D006183 ORTHO05D007844 3.5e-238 828.6 640 67.3
Sc17g0002990 Simmondsia chinensis HOM05D006183 ORTHO05D007844 1.0e-237 827.0 648 66.2
SGA_v2.0_scaffold1G00669 Striga asiatica HOM05D006183 ORTHO05D007844 1.1e-236 823.5 668 65.9
GSVIVG01028442001 Vitis vinifera HOM05D006183 ORTHO05D007844 1.9e-236 822.8 478 80.5
FAN24G0209 Fragaria x ananassa HOM05D006183 ORTHO05D007844 3.2e-236 822.0 651 64.5
Migut.D00486 Erythranthe guttata HOM05D006183 ORTHO05D007844 7.2e-236 820.8 658 66.4
FvH4_2g20290 Fragaria vesca HOM05D006183 ORTHO05D007844 1.2e-235 820.1 651 64.4
Sabra14G0143600 Salix brachista HOM05D006183 ORTHO05D007844 2.1e-235 819.3 651 63.4
Lj1g0002370 Lotus japonicus HOM05D006183 ORTHO05D007844 3.6e-235 818.5 639 67.3
Lalb_Chr20g0113511 Lupinus albus HOM05D006183 ORTHO05D007844 8.8e-234 813.9 483 81.2
HanXRQChr03g0066991 Helianthus annuus HOM05D006183 ORTHO05D007844 1.5e-233 813.1 643 65.5
Eucgr.K01415 Eucalyptus grandis HOM05D006183 ORTHO05D007844 3.3e-233 812.0 690 62.9
ATR0751G065 Amborella trichopoda HOM05D006183 ORTHO05D007844 4.4e-233 811.6 646 62.2
Potri.014G193500 Populus trichocarpa HOM05D006183 ORTHO05D007844 1.1e-231 807.0 653 66.3
PSO210G4577 Papaver somniferum HOM05D006183 ORTHO05D007844 2.2e-229 799.3 646 63.5
SalBow4G1671 Salvia bowleyana HOM05D006183 ORTHO05D007844 6.5e-229 797.7 736 60.1
Peaxi162Scf00499g00067 Petunia axillaris HOM05D006183 ORTHO05D007844 1.5e-228 796.6 658 62.8
Solyc06g008110.4 Solanum lycopersicum HOM05D006183 ORTHO05D007844 1.5e-228 796.6 651 65.0
AUR62008815 Chenopodium quinoa HOM05D006183 ORTHO05D007844 1.9e-228 796.2 646 61.6
Manes.13G038900 Manihot esculenta HOM05D006183 ORTHO05D007844 6.1e-227 791.2 660 62.6
Oeu015440.1 Olea europaea HOM05D006183 ORTHO05D007844 2.2e-224 782.7 713 58.9
AUR62025425 Chenopodium quinoa HOM05D006183 ORTHO05D007844 5.4e-223 778.1 658 59.9
Os10g0464100 Oryza sativa ssp. japonica HOM05D006183 ORTHO05D007844 1.6e-222 776.5 482 75.5
SEGI_33423 Sequoiadendron giganteum HOM05D006183 ORTHO05D007844 2.9e-221 772.3 678 62.2
CDE02G0751 Ceratophyllum demersum HOM05D006183 ORTHO05D007844 9.5e-220 767.3 645 60.8
Zm00001eb222270 Zea mays HOM05D006183 ORTHO05D007844 9.5e-220 767.3 483 74.3
MBI10_g16795_MAGBIO Magnolia biondii HOM05D006183 ORTHO05D007844 2.3e-218 762.7 454 78.6
HPP92_025390 Vanilla planifolia HOM05D006183 ORTHO05D007844 4.1e-215 751.9 550 67.3
FAN27G0957 Fragaria x ananassa HOM05D006183 ORTHO05D007844 2.5e-212 742.7 436 78.2
SHI26778 Sapria himalayana HOM05D006183 ORTHO05D007844 5.6e-212 741.5 655 60.0
Lj1A75T44 Lonicera japonica HOM05D006183 ORTHO05D007844 4.7e-211 738.4 628 61.1
AagrBONN_evm.TU.Sc2ySwM_228.230 Anthoceros agrestis HOM05D006183 ORTHO05D007844 1.6e-203 713.4 640 57.7
Actinidia37559 Actinidia chinensis HOM05D006183 ORTHO05D007844 2.0e-201 706.4 573 64.9
COL.COLO4_20954 Corchorus olitorius HOM05D006183 ORTHO05D007844 2.7e-198 696.0 457 73.1
CBR_g29722 Chara braunii HOM05D006183 ORTHO05D007844 2.1e-182 643.3 495 61.8
SMO117G0187 Selaginella moellendorffii HOM05D006183 ORTHO05D007844 2.3e-181 639.8 650 56.3
Mapoly0020s0160 Marchantia polymorpha HOM05D006183 ORTHO05D007844 8.6e-181 637.9 493 65.9
Pp3c3_26410 Physcomitrium patens HOM05D006183 ORTHO05D007844 3.8e-176 622.5 650 57.8
Actinidia30118 Actinidia chinensis HOM05D006183 ORTHO05D007844 1.9e-172 610.1 661 51.4
Dinv19261 Davidia involucrata HOM05D006183 ORTHO05D007844 2.8e-147 526.6 466 59.4
MD05G1186900 Malus domestica HOM05D006183 ORTHO05D007844 1.5e-145 520.8 548 52.6
SEGI_26680 Sequoiadendron giganteum HOM05D006183 ORTHO05D007844 1.7e-144 517.3 534 56.2
Cre04.g217750 Chlamydomonas reinhardtii HOM05D006183 ORTHO05D007844 5.5e-119 432.6 509 45.6
MCO16G174 Micromonas commoda HOM05D006183 ORTHO05D007844 8.8e-109 398.7 502 43.8
BcaNung04798 Brassica carinata HOM05D006183 ORTHO05D007844 4.8e-107 392.9 299 68.6
C09p15190 Brassica napus HOM05D006183 ORTHO05D007844 4.8e-107 392.9 299 68.6
BolC9t54425H Brassica oleracea HOM05D006183 ORTHO05D007844 4.8e-107 392.9 299 68.6
unitig_22.g6309 Utricularia gibba HOM05D006183 ORTHO05D007844 2.4e-98 364.0 403 50.6
Rhsim08G0025400 Rhododendron simsii HOM05D006183 ORTHO05D007844 4.4e-92 343.2 358 54.5
AagrBONN_evm.TU.Sc2ySwM_117.1688 Anthoceros agrestis HOM05D006183 ORTHO05D007844 8.6e-72 275.8 166 76.5
SHI26811 Sapria himalayana HOM05D006183 ORTHO05D007844 1.8e-61 241.5 337 43.3
PRCOL_00006356 Prasinoderma coloniale HOM05D006183 ORTHO05D007844 6.0e-57 226.5 533 31.9
Cfa024676 Carpinus fangiana HOM05D006183 ORTHO05D007844 5.3e-53 213.4 484 32.0
unitig_22.g6310 Utricularia gibba HOM05D006183 ORTHO05D007844 5.8e-44 183.3 107 77.6
AagrBONN_evm.TU.Sc2ySwM_117.1686 Anthoceros agrestis HOM05D006183 ORTHO05D007844 1.9e-34 151.8 102 69.6
RcHm_v2.0_Chr6g0286201 Rosa chinensis HOM05D006183 ORTHO05D007844 1.4e-26 125.6 84 71.4
Dinv36951 Davidia involucrata HOM05D006183 ORTHO05D007844 1.2e-12 79.3 59 67.8
BcaB07g31601 Brassica carinata HOM05D006183 ORTHO05D007844 1.5e-12 79.0 44 81.8
HanXRQChr13g0404811 Helianthus annuus HOM05D006183 ORTHO05D007844 1.5e-12 79.0 66 60.6
HanXRQChr14g0442591 Helianthus annuus HOM05D006183 ORTHO05D007844 2.6e-12 78.2 66 59.1
HPP92_028272 Vanilla planifolia HOM05D006183 ORTHO05D007844 2.1e-09 68.6 41 75.6
Oeu011224.1 Olea europaea HOM05D003335 ORTHO05D003853 5.7e-07 60.5 268 25.0
Lalb_Chr19g0128501 Lupinus albus HOM05D003335 ORTHO05D003853 7.4e-07 60.1 267 24.0
MBI16_g15538_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 1.7e-06 58.9 174 24.1
Mapoly0001s0287 Marchantia polymorpha HOM05D004768 ORTHO05D005812 3.7e-06 57.8 150 26.7
Psat6g019720 Pisum sativum HOM05D003913 ORTHO05D004803 8.2e-06 56.6 137 29.9


User provided reference genes

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