Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G10520 Aethionema arabicum HOM05D009371 ORTHO05D011485 1.7e-116 422.9 253 100.0
Aa31LG8G10500 Aethionema arabicum HOM05D009371 ORTHO05D011485 4.5e-101 371.7 250 90.0
Sp3g21640 Schrenkiella parvula HOM05D009371 ORTHO05D011485 8.1e-26 121.7 137 47.4
BcaB04g20406 Brassica carinata HOM05D009371 ORTHO05D011485 5.4e-22 109.0 119 47.1
A01p31190 Brassica napus HOM05D009371 ORTHO05D011485 7.1e-22 108.6 118 45.8
BraA01t03244Z Brassica rapa HOM05D009371 ORTHO05D011485 7.1e-22 108.6 118 45.8
A01p31120 Brassica napus HOM05D009371 ORTHO05D011485 7.8e-21 105.1 120 45.0
BraA01t03236Z Brassica rapa HOM05D009371 ORTHO05D011485 7.8e-21 105.1 120 45.0
C01p39740 Brassica napus HOM05D009371 ORTHO05D011485 1.3e-20 104.4 119 44.5
BolC1t03918H Brassica oleracea HOM05D009371 ORTHO05D011485 1.3e-20 104.4 120 44.2
BolC1t03928H Brassica oleracea HOM05D009371 ORTHO05D011485 2.3e-20 103.6 119 44.5
Thhalv10002921m.g Eutrema salsugineum HOM05D009371 ORTHO05D011485 6.6e-20 102.1 118 44.9
C01p39660 Brassica napus HOM05D009371 ORTHO05D011485 2.5e-19 100.1 113 44.2
AL3G38920 Arabidopsis lyrata HOM05D009371 ORTHO05D011485 5.6e-19 99.0 118 44.9
THA.LOC104808708 Tarenaya hassleriana HOM05D009371 ORTHO05D011485 2.1e-18 97.1 122 39.3
AT3G28870 Arabidopsis thaliana HOM05D009371 ORTHO05D011485 5.2e-17 92.4 116 41.4
AL3G38910 Arabidopsis lyrata HOM05D009371 ORTHO05D011485 2.0e-16 90.5 136 39.0
Carub.0003s2422 Capsella rubella HOM05D009371 ORTHO05D011485 2.6e-16 90.1 126 39.7
Sp3g21960 Schrenkiella parvula HOM05D009371 ORTHO05D011485 1.1e-14 84.7 121 38.0
BcaB04g20415 Brassica carinata HOM05D009371 ORTHO05D011485 1.9e-14 84.0 98 45.9
AT3G24260 Arabidopsis thaliana HOM05D009371 ORTHO05D011485 5.4e-14 82.4 117 42.7
BcaC06g35588 Brassica carinata HOM05D009371 ORTHO05D011485 1.2e-13 81.3 118 36.4
C07p13220 Brassica napus HOM05D009371 ORTHO05D011485 1.2e-13 81.3 118 36.4
BolC7t41814H Brassica oleracea HOM05D009371 ORTHO05D011485 1.2e-13 81.3 118 36.4
A07p08480 Brassica napus HOM05D009371 ORTHO05D011485 2.7e-13 80.1 118 36.4
BraA07t28633Z Brassica rapa HOM05D009371 ORTHO05D011485 2.7e-13 80.1 118 36.4
C02p07460 Brassica napus HOM05D000629 ORTHO05D000576 6.9e-09 65.5 131 30.5
BolC2t06677H Brassica oleracea HOM05D000629 ORTHO05D000576 6.9e-09 65.5 131 30.5
BcaC06g35589 Brassica carinata HOM05D009371 ORTHO05D011485 2.6e-08 63.5 106 34.9
BcaB01g05087 Brassica carinata HOM05D000629 ORTHO05D000576 2.9e-07 60.1 126 29.4
A02p02840 Brassica napus HOM05D000629 ORTHO05D000576 2.9e-07 60.1 131 29.0
A03p06900 Brassica napus HOM05D000629 ORTHO05D000576 2.9e-07 60.1 126 29.4
C03p07890 Brassica napus HOM05D000629 ORTHO05D000576 2.9e-07 60.1 126 29.4
BolC3t13287H Brassica oleracea HOM05D000629 ORTHO05D000576 2.9e-07 60.1 126 29.4
BraA02t05257Z Brassica rapa HOM05D000629 ORTHO05D000576 2.9e-07 60.1 131 29.0
BraA03t10012Z Brassica rapa HOM05D000629 ORTHO05D000576 2.9e-07 60.1 126 29.4
Aa31LG11G14500 Aethionema arabicum HOM05D000629 ORTHO05D000576 3.8e-07 59.7 126 31.7
AL6G25840 Arabidopsis lyrata HOM05D000629 ORTHO05D000576 3.8e-07 59.7 126 31.7
AT5G15020 Arabidopsis thaliana HOM05D000629 ORTHO05D000576 3.8e-07 59.7 126 31.7
BcaC06g31799 Brassica carinata HOM05D000629 ORTHO05D000576 3.8e-07 59.7 124 30.6
CARHR198290 Cardamine hirsuta HOM05D000629 ORTHO05D000576 3.8e-07 59.7 126 31.7
ECA238G1737 Erigeron canadensis HOM05D000629 ORTHO05D000576 3.8e-07 59.7 126 31.0
Thhalv10012461m.g Eutrema salsugineum HOM05D000629 ORTHO05D000576 3.8e-07 59.7 126 31.7
BcaB06g26555 Brassica carinata HOM05D009371 ORTHO05D011485 4.9e-07 59.3 79 36.7
Sabra17G0049900 Salix brachista HOM05D000629 ORTHO05D018910 4.9e-07 59.3 247 22.7
HanXRQChr14g0448871 Helianthus annuus HOM05D000629 ORTHO05D000576 6.4e-07 58.9 126 31.0
Lalb_Chr21g0319171 Lupinus albus HOM05D000629 ORTHO05D000576 6.4e-07 58.9 126 30.2
Carub.0006s1318 Capsella rubella HOM05D000629 ORTHO05D000576 8.4e-07 58.5 126 31.0
HanXRQChr12g0385641 Helianthus annuus HOM05D000629 ORTHO05D000576 8.4e-07 58.5 126 30.2
unitig_744.g24345 Utricularia gibba HOM05D000629 ORTHO05D000576 8.4e-07 58.5 126 30.2
Solyc02g067570.3 Solanum lycopersicum HOM05D000629 ORTHO05D000576 1.1e-06 58.2 126 29.4
Psat1g078160 Pisum sativum HOM05D000629 ORTHO05D000576 1.4e-06 57.8 126 29.4
Sp6g29020 Schrenkiella parvula HOM05D000629 ORTHO05D000576 1.4e-06 57.8 126 30.2
SGA_v2.0_scaffold30G12504 Striga asiatica HOM05D000629 ORTHO05D000576 1.4e-06 57.8 126 29.4
BcaC09g47650 Brassica carinata HOM05D000629 ORTHO05D000576 1.9e-06 57.4 126 28.6
BNapus_Darmor_BZH_scaffold_119p00100 Brassica napus HOM05D000629 ORTHO05D000576 1.9e-06 57.4 126 28.6
BNapus_Darmor_BZH_scaffold_97p00340 Brassica napus HOM05D000629 ORTHO05D000576 1.9e-06 57.4 126 28.6
BolC1t05951H Brassica oleracea HOM05D000629 ORTHO05D000576 1.9e-06 57.4 126 28.6
BraA01t04659Z Brassica rapa HOM05D000629 ORTHO05D000576 1.9e-06 57.4 126 28.6
Carub.0001s0989 Capsella rubella HOM05D000629 ORTHO05D000576 1.9e-06 57.4 119 28.6
Glyma.13G067800 Glycine max HOM05D000629 ORTHO05D000576 1.9e-06 57.4 126 29.4
Lsat_1_v5_gn_2_90740 Lactuca sativa HOM05D000629 ORTHO05D000576 1.9e-06 57.4 126 28.6
SalBow1G0078 Salvia bowleyana HOM05D000629 ORTHO05D000576 1.9e-06 57.4 126 29.4
Hund16094 Selenicereus undatus HOM05D000629 ORTHO05D000576 1.9e-06 57.4 126 30.2
TPR.G32588 Trifolium pratense HOM05D000629 ORTHO05D000576 1.9e-06 57.4 126 29.4
Actinidia09930 Actinidia chinensis HOM05D000629 ORTHO05D017222 2.4e-06 57.0 130 27.7
CAN.G1128.14 Capsicum annuum HOM05D000629 ORTHO05D000576 2.4e-06 57.0 126 28.6
CARHR075690 Cardamine hirsuta HOM05D000629 ORTHO05D000576 2.4e-06 57.0 126 28.6
Thhalv10019899m.g Eutrema salsugineum HOM05D000629 ORTHO05D000576 2.4e-06 57.0 126 28.6
Gohir.A11G068400 Gossypium hirsutum HOM05D000629 ORTHO05D000576 2.4e-06 57.0 126 29.4
Gohir.D11G072600 Gossypium hirsutum HOM05D000629 ORTHO05D000576 2.4e-06 57.0 126 28.6
Gorai.007G077800 Gossypium raimondii HOM05D000629 ORTHO05D000576 2.4e-06 57.0 126 28.6
Sabra17G0048200 Salix brachista HOM05D000629 ORTHO05D018910 2.4e-06 57.0 247 22.7
BNapus_Darmor_BZH_scaffold_133p00100 Brassica napus HOM05D000629 ORTHO05D000576 3.2e-06 56.6 126 28.6
Lalb_Chr06g0176551 Lupinus albus HOM05D000629 ORTHO05D000576 3.2e-06 56.6 126 31.0
Phvul.004G022900 Phaseolus vulgaris HOM05D000629 ORTHO05D000576 3.2e-06 56.6 126 29.4
THA.LOC104822375 Tarenaya hassleriana HOM05D000629 ORTHO05D000576 3.2e-06 56.6 126 28.6
VMungo0464G1995 Vigna mungo HOM05D000629 ORTHO05D000576 3.2e-06 56.6 126 29.4
Haze_11617 Corylus avellana HOM05D000629 ORTHO05D020364 4.2e-06 56.2 99 34.3
FAN08G1271 Fragaria x ananassa HOM05D000629 ORTHO05D000576 4.2e-06 56.2 130 30.8
Glyma.19G016300 Glycine max HOM05D000629 ORTHO05D000576 4.2e-06 56.2 126 30.2
Peaxi162Scf00059g00016 Petunia axillaris HOM05D000629 ORTHO05D000576 4.2e-06 56.2 126 29.4
Sc11g0008010 Simmondsia chinensis HOM05D000629 ORTHO05D000576 4.2e-06 56.2 124 29.0
Solyc02g087360.4 Solanum lycopersicum HOM05D000629 ORTHO05D000576 4.2e-06 56.2 124 29.0
Sopen02g032110 Solanum pennellii HOM05D000629 ORTHO05D000576 4.2e-06 56.2 124 29.0
PGSC0003DMG400001397 Solanum tuberosum HOM05D000629 ORTHO05D000576 4.2e-06 56.2 124 29.0
SGA_v2.0_scaffold166G38313 Striga asiatica HOM05D000629 ORTHO05D000576 4.2e-06 56.2 120 29.2
TAR622G0057 Trochodendron aralioides HOM05D000629 ORTHO05D000576 4.2e-06 56.2 122 32.0
unitig_21.g20510 Utricularia gibba HOM05D000629 ORTHO05D000576 4.2e-06 56.2 129 30.2
CANSAT01G0613 Cannabis sativa HOM05D000629 ORTHO05D000576 5.4e-06 55.8 126 28.6
CARHR010590 Cardamine hirsuta HOM05D000629 ORTHO05D000576 5.4e-06 55.8 119 28.6
Cc07_g02780 Coffea canephora HOM05D000629 ORTHO05D000576 5.4e-06 55.8 126 29.4
FvH4_5g22630 Fragaria vesca HOM05D000629 ORTHO05D014635 5.4e-06 55.8 130 30.8
FAN18G1989 Fragaria x ananassa HOM05D000629 ORTHO05D014635 5.4e-06 55.8 130 30.8
FAN18G3419 Fragaria x ananassa HOM05D000629 ORTHO05D014635 5.4e-06 55.8 130 30.8
Hma1.2p1_0849F.1_g228070 Hydrangea macrophylla HOM05D000629 ORTHO05D000576 5.4e-06 55.8 129 27.9
Nitab4.5_0001727g0110 Nicotiana tabacum HOM05D000629 ORTHO05D000576 5.4e-06 55.8 126 29.4
Sopen02g016700 Solanum pennellii HOM05D000629 ORTHO05D000576 5.4e-06 55.8 126 27.8
AT1G10450 Arabidopsis thaliana HOM05D000629 ORTHO05D000576 7.1e-06 55.5 120 30.0
Migut.M00134 Erythranthe guttata HOM05D000629 ORTHO05D000576 7.1e-06 55.5 126 27.0
Medtr6g008970 Medicago truncatula HOM05D000629 ORTHO05D000576 7.1e-06 55.5 126 29.4
RcHm_v2.0_Chr6g0269611 Rosa chinensis HOM05D000629 ORTHO05D000576 7.1e-06 55.5 126 30.2
Sp3g00760 Schrenkiella parvula HOM05D000629 ORTHO05D000576 7.1e-06 55.5 126 30.2
SMO115G0316 Selaginella moellendorffii HOM05D000629 ORTHO05D000576 7.1e-06 55.5 124 29.8
Zm00001eb267730 Zea mays HOM05D000629 ORTHO05D000576 7.1e-06 55.5 126 27.8
Carub.0003s0081 Capsella rubella HOM05D000629 ORTHO05D000576 9.3e-06 55.1 126 29.4
CAN.G206.73 Capsicum annuum HOM05D000629 ORTHO05D000576 9.3e-06 55.1 126 29.4
Oeu031505.3 Olea europaea HOM05D000629 ORTHO05D000576 9.3e-06 55.1 126 28.6
Sabra16G0229600 Salix brachista HOM05D000629 ORTHO05D000576 9.3e-06 55.1 124 29.8
SGA_v2.0_scaffold135G34805 Striga asiatica HOM05D000629 ORTHO05D000084 9.3e-06 55.1 123 27.6


User provided reference genes

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