Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G14390 Aethionema arabicum HOM05D001054 ORTHO05D007110 0.0e+00 1112.1 545 100.0
Sp7g35190 Schrenkiella parvula HOM05D001054 ORTHO05D007110 8.8e-304 1046.2 545 92.8
Thhalv10024858m.g Eutrema salsugineum HOM05D001054 ORTHO05D007110 3.7e-302 1040.8 545 93.0
Carub.0007s0278 Capsella rubella HOM05D001054 ORTHO05D007110 2.4e-301 1038.1 545 93.0
AL7G13250 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 2.2e-299 1031.6 545 93.0
AT4G37510 Arabidopsis thaliana HOM05D001054 ORTHO05D007110 6.5e-299 1030.0 545 92.8
CARHR245910 Cardamine hirsuta HOM05D001054 ORTHO05D007110 4.2e-298 1027.3 546 92.7
THA.LOC104807624 Tarenaya hassleriana HOM05D001054 ORTHO05D007110 1.2e-295 1019.2 541 90.4
BcaNung03665 Brassica carinata HOM05D001054 ORTHO05D007110 2.5e-282 974.9 546 87.5
C01p01620 Brassica napus HOM05D001054 ORTHO05D007110 2.5e-282 974.9 546 87.5
BcaNung05084 Brassica carinata HOM05D001054 ORTHO05D007110 6.8e-280 966.8 552 87.3
BraA01t00139Z Brassica rapa HOM05D001054 ORTHO05D007110 1.5e-279 965.7 547 86.8
A01p01450 Brassica napus HOM05D001054 ORTHO05D007110 2.6e-279 964.9 547 86.8
BolC1t00157H Brassica oleracea HOM05D001054 ORTHO05D007110 5.7e-279 963.8 548 86.9
Cpa.g.sc6.46 Carica papaya HOM05D001054 ORTHO05D007110 1.6e-276 955.7 537 85.1
Thecc.01G069100 Theobroma cacao HOM05D001054 ORTHO05D007110 3.9e-267 924.5 541 83.2
TWI09G0178 Tripterygium wilfordii HOM05D001054 ORTHO05D007110 6.6e-267 923.7 537 81.4
TAR625G0225 Trochodendron aralioides HOM05D001054 ORTHO05D007110 2.5e-266 921.8 543 81.2
CANSAT01G2549 Cannabis sativa HOM05D001054 ORTHO05D007110 3.6e-265 917.9 537 80.8
Gorai.008G080600 Gossypium raimondii HOM05D001054 ORTHO05D007110 4.7e-265 917.5 541 82.3
Gohir.D12G073300 Gossypium hirsutum HOM05D001054 ORTHO05D007110 3.1e-264 914.8 541 81.9
Atru.chr3.194 Acer truncatum HOM05D001054 ORTHO05D007110 4.4e-263 911.0 545 81.5
FvH4_1g17270 Fragaria vesca HOM05D001054 ORTHO05D007110 7.5e-263 910.2 527 82.0
Nn7g37208 Nelumbo nucifera HOM05D001054 ORTHO05D007110 9.8e-263 909.8 545 80.6
Manes.13G113500 Manihot esculenta HOM05D001054 ORTHO05D007110 1.3e-262 909.4 522 82.4
Ciclev10025341m.g Citrus clementina HOM05D001054 ORTHO05D007110 2.9e-262 908.3 533 81.4
Sed0014779 Sechium edule HOM05D001054 ORTHO05D007110 1.4e-261 906.0 525 81.7
Prupe.6G223800 Prunus persica HOM05D001054 ORTHO05D007110 4.1e-261 904.4 536 80.2
Atru.chr3.165 Acer truncatum HOM05D001054 ORTHO05D007110 5.4e-261 904.0 548 80.7
ClCG01G017380 Citrullus lanatus HOM05D001054 ORTHO05D007110 1.2e-260 902.9 537 81.0
CsaV3_6G043910 Cucumis sativus L. HOM05D001054 ORTHO05D007110 1.2e-260 902.9 537 80.4
Duzib264G0621 Durio zibethinus HOM05D001054 ORTHO05D007110 1.6e-260 902.5 536 81.2
TAR628G0943 Trochodendron aralioides HOM05D001054 ORTHO05D007110 1.6e-260 902.5 525 81.7
MSTRG.23690 Avicennia marina HOM05D001054 ORTHO05D007110 2.7e-260 901.7 525 82.1
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla HOM05D001054 ORTHO05D007110 2.7e-260 901.7 541 80.0
PGSC0003DMG400023692 Solanum tuberosum HOM05D001054 ORTHO05D007110 3.5e-260 901.4 545 79.6
FAN19G1445 Fragaria x ananassa HOM05D001054 ORTHO05D007110 4.6e-260 901.0 536 80.4
Solyc10g080040.3 Solanum lycopersicum HOM05D001054 ORTHO05D007110 7.8e-260 900.2 545 79.6
Cc07_g06840 Coffea canephora HOM05D001054 ORTHO05D007110 1.7e-259 899.0 520 81.9
Lj7C88G8 Lonicera japonica HOM05D001054 ORTHO05D007110 1.7e-259 899.0 546 80.0
Sopen10g030650 Solanum pennellii HOM05D001054 ORTHO05D007110 1.7e-259 899.0 545 79.4
Oeu013280.1 Olea europaea HOM05D001054 ORTHO05D007110 2.3e-259 898.7 545 80.4
MBI19_g10811_MAGBIO Magnolia biondii HOM05D001054 ORTHO05D007110 5.0e-259 897.5 537 81.0
PGR004G0129 Punica granatum HOM05D001054 ORTHO05D007110 6.6e-259 897.1 529 81.5
COL.COLO4_11542 Corchorus olitorius HOM05D001054 ORTHO05D007110 8.6e-259 896.7 522 81.8
MELO3C007616.2 Cucumis melo HOM05D001054 ORTHO05D007110 3.3e-258 894.8 563 77.3
Sed0024674 Sechium edule HOM05D001054 ORTHO05D007110 3.3e-258 894.8 537 79.7
FAN26G1436 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.6e-257 892.5 562 76.9
SalBow6G1211 Salvia bowleyana HOM05D001054 ORTHO05D007110 3.6e-257 891.3 520 80.8
PSO541G5579 Papaver somniferum HOM05D001054 ORTHO05D007110 4.7e-257 891.0 528 80.3
Eucgr.C03692 Eucalyptus grandis HOM05D001054 ORTHO05D007110 1.1e-256 889.8 522 80.5
Cfa004102 Carpinus fangiana HOM05D001054 ORTHO05D007110 1.4e-256 889.4 519 80.9
RcHm_v2.0_Chr2g0107461 Rosa chinensis HOM05D001054 ORTHO05D007110 1.4e-256 889.4 590 73.9
PSO675G2247 Papaver somniferum HOM05D001054 ORTHO05D007110 2.3e-256 888.6 528 80.1
FAN23G1327 Fragaria x ananassa HOM05D001054 ORTHO05D007110 3.1e-256 888.3 562 77.2
HanXRQChr14g0441861 Helianthus annuus HOM05D001054 ORTHO05D007110 3.1e-256 888.3 538 78.4
DCAR_010834 Daucus carota HOM05D001054 ORTHO05D007110 8.9e-256 886.7 534 79.8
Rhsim10G0102900 Rhododendron simsii HOM05D001054 ORTHO05D007110 1.5e-255 885.9 595 72.9
Eucgr.C03920 Eucalyptus grandis HOM05D001054 ORTHO05D007110 7.5e-255 883.6 512 80.9
Nitab4.5_0002331g0050 Nicotiana tabacum HOM05D001054 ORTHO05D007110 7.5e-255 883.6 545 79.1
Migut.H00367 Erythranthe guttata HOM05D001054 ORTHO05D007110 4.9e-254 880.9 526 79.7
Peaxi162Scf00365g00936 Petunia axillaris HOM05D001054 ORTHO05D007110 4.9e-254 880.9 542 78.8
CiPaw.01G007000 Carya illinoinensis HOM05D001054 ORTHO05D007110 6.4e-254 880.6 518 81.1
Sc16g0004970 Simmondsia chinensis HOM05D001054 ORTHO05D007110 3.2e-253 878.2 524 80.2
Aqoxy2G00045 Aquilegia oxysepala HOM05D001054 ORTHO05D007110 5.4e-253 877.5 547 78.1
Nitab4.5_0006689g0010 Nicotiana tabacum HOM05D001054 ORTHO05D007110 7.1e-253 877.1 545 78.9
Potri.007G053000 Populus trichocarpa HOM05D001054 ORTHO05D007110 3.5e-252 874.8 545 78.0
AUR62003982 Chenopodium quinoa HOM05D001054 ORTHO05D007110 1.7e-251 872.5 523 79.2
AUR62040267 Chenopodium quinoa HOM05D001054 ORTHO05D007110 7.3e-250 867.1 523 78.8
Sabra07G0046600 Salix brachista HOM05D001054 ORTHO05D007110 1.6e-249 865.9 545 77.4
SGA_v2.0_scaffold72G24093 Striga asiatica HOM05D001054 ORTHO05D007110 1.6e-249 865.9 521 78.9
ATR1096G061 Amborella trichopoda HOM05D001054 ORTHO05D007110 2.1e-249 865.5 535 77.0
EL10Ac6g15648 Beta vulgaris HOM05D001054 ORTHO05D007110 4.7e-249 864.4 540 76.9
Haze_15309 Corylus avellana HOM05D001054 ORTHO05D007110 8.1e-249 863.6 539 77.0
Lsat_1_v5_gn_2_83701 Lactuca sativa HOM05D001054 ORTHO05D007110 1.1e-248 863.2 522 79.1
CDE04G1953 Ceratophyllum demersum HOM05D001054 ORTHO05D007110 8.9e-248 860.1 544 77.6
Lj2g0007837 Lotus japonicus HOM05D001054 ORTHO05D007110 8.9e-248 860.1 536 78.7
TPR.G20955 Trifolium pratense HOM05D001054 ORTHO05D007110 6.4e-246 854.0 549 76.9
Psat2g170280 Pisum sativum HOM05D001054 ORTHO05D007110 1.1e-245 853.2 536 77.1
Glyma.11G049900 Glycine max HOM05D001054 ORTHO05D007110 1.4e-245 852.8 539 77.7
DCAR_021470 Daucus carota HOM05D001054 ORTHO05D007110 2.4e-245 852.0 508 79.5
Hund13932 Selenicereus undatus HOM05D001054 ORTHO05D007110 1.6e-244 849.4 537 75.4
Glyma.01G192200 Glycine max HOM05D001054 ORTHO05D007110 2.1e-244 849.0 504 81.3
Medtr5g016070 Medicago truncatula HOM05D001054 ORTHO05D007110 1.3e-243 846.3 535 77.0
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 2.3e-243 845.5 497 80.9
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 2.5e-242 842.0 488 82.2
Os01g0810100 Oryza sativa ssp. japonica HOM05D001054 ORTHO05D007110 9.6e-242 840.1 483 81.4
Phvul.002G012600 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 6.2e-241 837.4 534 77.2
SGA_v2.0_scaffold15G07420 Striga asiatica HOM05D001054 ORTHO05D007110 2.4e-240 835.5 521 77.4
Lalb_Chr05g0213551 Lupinus albus HOM05D001054 ORTHO05D007110 5.2e-240 834.3 537 75.4
VMungo1215G2035 Vigna mungo HOM05D001054 ORTHO05D007110 9.0e-240 833.6 537 76.7
Lalb_Chr09g0323511 Lupinus albus HOM05D001054 ORTHO05D007110 2.9e-238 828.6 556 73.7
HPP92_018502 Vanilla planifolia HOM05D001054 ORTHO05D007110 2.9e-238 828.6 550 73.8
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea HOM05D001054 ORTHO05D007110 1.7e-235 819.3 541 73.8
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea HOM05D001054 ORTHO05D007110 6.6e-235 817.4 528 75.0
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea HOM05D001054 ORTHO05D007110 6.6e-235 817.4 543 73.5
CSS0030463 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 1.9e-234 815.8 535 75.0
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea HOM05D001054 ORTHO05D007110 3.3e-234 815.1 528 75.0
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea HOM05D001054 ORTHO05D007110 7.3e-234 813.9 543 73.3
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea HOM05D001054 ORTHO05D007110 1.0e-227 793.5 563 70.0
Lj4g0019986 Lotus japonicus HOM05D001054 ORTHO05D007110 1.6e-225 786.2 519 72.8
VMungo0251G1033 Vigna mungo HOM05D001054 ORTHO05D007110 1.2e-223 780.0 520 72.7
Phvul.003G236900 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 1.2e-220 770.0 520 71.5
HPP92_017544 Vanilla planifolia HOM05D001054 ORTHO05D007110 1.8e-219 766.1 473 76.1
TPR.G23864 Trifolium pratense HOM05D001054 ORTHO05D007110 1.9e-213 746.1 531 68.7
Medtr4g095410 Medicago truncatula HOM05D001054 ORTHO05D007110 9.7e-210 733.8 528 68.8
Ah.02g125600 Amaranthus hybridus HOM05D001054 ORTHO05D007110 1.6e-209 733.0 426 80.0
ECA238G1085 Erigeron canadensis HOM05D001054 ORTHO05D007110 1.6e-209 733.0 398 84.2
Zm00001eb150280 Zea mays HOM05D001054 ORTHO05D007110 4.8e-209 731.5 427 79.9
Gohir.A12G075200 Gossypium hirsutum HOM05D001054 ORTHO05D007110 4.6e-204 714.9 392 85.2
AL5G41245 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 1.7e-190 669.8 413 83.5
Dinv26904 Davidia involucrata HOM05D001054 ORTHO05D007110 2.7e-188 662.5 413 78.2
Psat4g083600 Pisum sativum HOM05D001054 ORTHO05D007110 3.7e-185 652.1 398 75.6
Actinidia36442 Actinidia chinensis HOM05D001054 ORTHO05D007110 8.2e-185 651.0 500 65.4
CSS0024742 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 2.5e-181 639.4 332 88.6
Mapoly0005s0153 Marchantia polymorpha HOM05D001054 ORTHO05D007110 1.6e-159 567.0 492 57.9
Pp3c5_10700 Physcomitrium patens HOM05D001054 ORTHO05D007110 5.6e-157 558.5 478 58.6
HPP92_017568 Vanilla planifolia HOM05D001054 ORTHO05D007110 2.7e-151 539.7 412 66.5
GSVIVG01000148001 Vitis vinifera HOM05D001054 ORTHO05D007110 1.0e-150 537.7 283 87.3
vmacro05387 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 9.2e-136 488.0 346 68.8
SMO119G0428 Selaginella moellendorffii HOM05D001054 ORTHO05D007110 1.3e-134 484.2 451 53.7
SEGI_29234 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 1.6e-132 477.2 419 59.2
AagrBONN_evm.TU.Sc2ySwM_368.879 Anthoceros agrestis HOM05D001054 ORTHO05D007110 3.6e-132 476.1 463 52.7
Glyma.05G104100 Glycine max HOM05D001054 ORTHO05D007110 3.6e-124 449.5 320 68.1
vmacro05388 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 6.2e-108 395.6 275 70.9
MD15G1293700 Malus domestica HOM05D001054 ORTHO05D007110 3.4e-90 336.7 181 85.6
FAN28G0670 Fragaria x ananassa HOM05D001054 ORTHO05D007110 2.2e-89 334.0 223 76.2
Duzib147G0207 Durio zibethinus HOM05D001054 ORTHO05D007110 7.4e-85 318.9 182 83.0
AL7G13080 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 2.9e-81 307.0 172 83.7
SEGI_10508 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 3.8e-57 226.9 135 76.3
Actinidia11996 Actinidia chinensis HOM05D001054 ORTHO05D007110 3.7e-44 183.7 121 73.6
Eucgr.C03694 Eucalyptus grandis HOM05D001054 ORTHO05D026867 2.0e-42 177.9 102 79.4
Actinidia11995 Actinidia chinensis HOM05D001054 ORTHO05D038022 1.3e-36 158.7 81 90.1
Oeu038701.1 Olea europaea HOM05D001054 ORTHO05D038022 9.2e-27 125.9 67 82.1
AT2G48121 Arabidopsis thaliana HOM05D001054 ORTHO05D026867 3.6e-23 114.0 58 93.1
A03p65210 Brassica napus HOM05D001054 ORTHO05D026867 6.2e-23 113.2 63 84.1
BraA03t15579Z Brassica rapa HOM05D001054 ORTHO05D026867 6.2e-23 113.2 63 84.1
C07p62420 Brassica napus HOM05D001054 ORTHO05D007110 2.3e-22 111.3 56 91.1
BcaNung02059 Brassica carinata HOM05D001054 ORTHO05D007110 1.7e-20 105.1 50 94.0
Sed0007349 Sechium edule HOM05D001054 ORTHO05D007110 1.2e-13 82.4 63 65.1


User provided reference genes

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