Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G10220 Aethionema arabicum HOM05D005363 ORTHO05D006607 0.0e+00 1318.5 710 100.0
CARHR267540 Cardamine hirsuta HOM05D005363 ORTHO05D006607 0.0e+00 1129.4 730 84.7
Sp6g16300 Schrenkiella parvula HOM05D005363 ORTHO05D006607 0.0e+00 1125.5 720 84.6
Thhalv10012804m.g Eutrema salsugineum HOM05D005363 ORTHO05D006607 0.0e+00 1121.3 721 84.9
AT5G54260 Arabidopsis thaliana HOM05D005363 ORTHO05D006607 0.0e+00 1119.4 628 91.7
AL8G29590 Arabidopsis lyrata HOM05D005363 ORTHO05D006607 0.0e+00 1110.9 699 86.6
Carub.0008s1460 Capsella rubella HOM05D005363 ORTHO05D006607 0.0e+00 1094.3 603 93.0
BcaC04g20356 Brassica carinata HOM05D005363 ORTHO05D006607 0.0e+00 1088.6 721 83.6
BolC9t57330H Brassica oleracea HOM05D005363 ORTHO05D006607 0.0e+00 1082.4 726 82.6
BraA10t43250Z Brassica rapa HOM05D005363 ORTHO05D006607 0.0e+00 1082.0 726 82.6
BcaB08g35781 Brassica carinata HOM05D005363 ORTHO05D006607 0.0e+00 1075.8 721 82.7
C09p44570 Brassica napus HOM05D005363 ORTHO05D006607 2.6e-308 1061.6 748 80.7
A10p11550 Brassica napus HOM05D005363 ORTHO05D006607 5.9e-308 1060.4 750 80.5
CiPaw.11G177000 Carya illinoinensis HOM05D005363 ORTHO05D006607 1.7e-302 1042.3 726 76.2
CANSAT11G0579 Cannabis sativa HOM05D005363 ORTHO05D006607 1.2e-297 1026.2 729 75.9
COL.COLO4_09485 Corchorus olitorius HOM05D005363 ORTHO05D006607 5.1e-296 1020.8 725 75.0
Thecc.07G070700 Theobroma cacao HOM05D005363 ORTHO05D006607 1.0e-291 1006.5 730 73.0
Potri.001G407300 Populus trichocarpa HOM05D005363 ORTHO05D006607 3.8e-291 1004.6 732 74.0
QL08p017669 Quercus lobata HOM05D005363 ORTHO05D006607 4.2e-290 1001.1 780 69.9
Cpa.g.sc12.44 Carica papaya HOM05D005363 ORTHO05D006607 1.2e-289 999.6 715 74.5
TAR629G3355 Trochodendron aralioides HOM05D005363 ORTHO05D006607 1.6e-289 999.2 725 74.2
MSTRG.5819 Avicennia marina HOM05D005363 ORTHO05D006607 4.7e-289 997.7 737 73.1
Ciclev10007579m.g Citrus clementina HOM05D005363 ORTHO05D006607 8.0e-289 996.9 731 73.7
Actinidia35283 Actinidia chinensis HOM05D005363 ORTHO05D006607 2.6e-287 991.9 742 72.4
CSS0003917 Camellia sinensis var. sinensis HOM05D005363 ORTHO05D006607 3.3e-287 991.5 717 73.8
Sc03g0009580 Simmondsia chinensis HOM05D005363 ORTHO05D006607 5.7e-287 990.7 728 74.5
Duzib170G0704 Durio zibethinus HOM05D005363 ORTHO05D006607 8.2e-286 986.9 728 72.9
arahy.Tifrunner.gnm1.ann1.42XSYF Arachis hypogaea HOM05D005363 ORTHO05D006607 7.0e-285 983.8 722 73.5
GSVIVG01014441001 Vitis vinifera HOM05D005363 ORTHO05D006607 1.2e-284 983.0 730 73.2
Manes.15G082900 Manihot esculenta HOM05D005363 ORTHO05D006607 2.0e-284 982.2 731 72.0
Migut.J00972 Erythranthe guttata HOM05D005363 ORTHO05D006607 1.7e-283 979.2 729 71.9
Lalb_Chr25g0286791 Lupinus albus HOM05D005363 ORTHO05D006607 5.0e-283 977.6 723 72.6
arahy.Tifrunner.gnm1.ann1.3P80NP Arachis hypogaea HOM05D005363 ORTHO05D006607 4.2e-282 974.5 722 73.3
Gohir.D05G362100 Gossypium hirsutum HOM05D005363 ORTHO05D006607 4.2e-282 974.5 722 73.5
MD11G1235900 Malus domestica HOM05D005363 ORTHO05D006607 5.5e-282 974.2 726 73.1
Gorai.009G430700 Gossypium raimondii HOM05D005363 ORTHO05D006607 9.4e-282 973.4 722 73.3
RcHm_v2.0_Chr5g0036071 Rosa chinensis HOM05D005363 ORTHO05D006607 1.6e-281 972.6 722 71.9
Glyma.12G219100 Glycine max HOM05D005363 ORTHO05D006607 3.6e-281 971.5 722 71.5
PGR083G1158 Punica granatum HOM05D005363 ORTHO05D006607 8.0e-281 970.3 732 71.4
Dinv08347 Davidia involucrata HOM05D005363 ORTHO05D006607 1.4e-280 969.5 746 73.9
Prupe.4G191100 Prunus persica HOM05D005363 ORTHO05D006607 4.0e-280 968.0 738 70.5
Nn1g03887 Nelumbo nucifera HOM05D005363 ORTHO05D006607 8.8e-280 966.8 725 73.4
MD03G1218100 Malus domestica HOM05D005363 ORTHO05D006607 4.4e-279 964.5 723 72.6
Phvul.005G085700 Phaseolus vulgaris HOM05D005363 ORTHO05D006607 4.4e-279 964.5 723 71.6
CsaV3_3G044350 Cucumis sativus L. HOM05D005363 ORTHO05D006607 1.3e-278 963.0 714 71.8
THA.LOC104813315 Tarenaya hassleriana HOM05D005363 ORTHO05D006607 1.3e-278 963.0 528 89.0
Psat2g184560 Pisum sativum HOM05D005363 ORTHO05D006607 2.2e-278 962.2 715 72.7
SGA_v2.0_scaffold13G06767 Striga asiatica HOM05D005363 ORTHO05D006607 6.3e-278 960.7 735 70.9
vmacro09564 Vaccinium macrocarpon HOM05D005363 ORTHO05D006607 1.1e-277 959.9 683 73.9
Oeu009902.1 Olea europaea HOM05D005363 ORTHO05D006607 2.4e-277 958.7 732 72.0
Lsat_1_v5_gn_9_95600 Lactuca sativa HOM05D005363 ORTHO05D006607 4.1e-277 958.0 726 71.3
HanXRQChr03g0077211 Helianthus annuus HOM05D005363 ORTHO05D006607 1.2e-276 956.4 733 69.4
SalBow3G2312 Salvia bowleyana HOM05D005363 ORTHO05D006607 1.6e-276 956.1 751 70.3
Lj3g0015043 Lotus japonicus HOM05D005363 ORTHO05D006607 1.7e-275 952.6 721 70.2
ClCG11G018480 Citrullus lanatus HOM05D005363 ORTHO05D006607 3.8e-275 951.4 707 72.1
Sabra16G0268700 Salix brachista HOM05D005363 ORTHO05D006607 5.0e-275 951.0 714 73.0
Sed0012869 Sechium edule HOM05D005363 ORTHO05D006607 1.9e-274 949.1 711 71.6
ECA240G2604 Erigeron canadensis HOM05D005363 ORTHO05D006607 2.5e-274 948.7 726 70.8
PSO832G2870 Papaver somniferum HOM05D005363 ORTHO05D006607 2.1e-273 945.7 739 70.2
PSO210G7030 Papaver somniferum HOM05D005363 ORTHO05D006607 3.0e-272 941.8 736 70.2
Sabra16G0270900 Salix brachista HOM05D005363 ORTHO05D006607 1.2e-271 939.9 659 74.8
FAN21G3123 Fragaria x ananassa HOM05D005363 ORTHO05D006607 1.5e-271 939.5 717 70.4
Hma1.2p1_1176F.1_g264200 Hydrangea macrophylla HOM05D005363 ORTHO05D006607 4.4e-271 937.9 746 68.8
Aqoxy1G03881 Aquilegia oxysepala HOM05D005363 ORTHO05D006607 1.7e-270 936.0 731 70.0
FAN11G3021 Fragaria x ananassa HOM05D005363 ORTHO05D006607 1.1e-269 933.3 733 69.8
FvH4_3g21040 Fragaria vesca HOM05D005363 ORTHO05D006607 1.4e-269 932.9 733 70.0
Medtr2g081100 Medicago truncatula HOM05D005363 ORTHO05D006607 1.4e-269 932.9 704 71.2
TPR.G32857 Trifolium pratense HOM05D005363 ORTHO05D006607 1.7e-267 926.0 713 71.9
HPP92_026561 Vanilla planifolia HOM05D005363 ORTHO05D006607 2.9e-267 925.2 718 68.7
FAN25G3415 Fragaria x ananassa HOM05D005363 ORTHO05D006607 1.2e-265 919.8 720 69.9
EL10Ac4g08052 Beta vulgaris HOM05D005363 ORTHO05D006607 2.1e-265 919.1 767 66.6
RhsimUnG0258300 Rhododendron simsii HOM05D005363 ORTHO05D006607 2.8e-265 918.7 653 72.3
Haze_09533 Corylus avellana HOM05D005363 ORTHO05D006607 3.6e-265 918.3 812 65.0
HPP92_026534 Vanilla planifolia HOM05D005363 ORTHO05D006607 3.4e-263 911.8 731 66.8
Sopen09g004090 Solanum pennellii HOM05D005363 ORTHO05D006607 5.7e-263 911.0 544 82.0
Hund02186 Selenicereus undatus HOM05D005363 ORTHO05D006607 7.5e-263 910.6 711 68.6
Cc06_g05460 Coffea canephora HOM05D005363 ORTHO05D006607 9.8e-263 910.2 505 86.5
ATR0693G020 Amborella trichopoda HOM05D005363 ORTHO05D006607 2.4e-261 905.6 712 68.4
Gohir.D01G056400 Gossypium hirsutum HOM05D005363 ORTHO05D006607 5.9e-260 901.0 711 69.8
DCAR_018424 Daucus carota HOM05D005363 ORTHO05D006607 1.9e-258 896.0 666 72.8
CAN.G824.3 Capsicum annuum HOM05D005363 ORTHO05D006607 2.8e-257 892.1 669 72.5
MBI15_g19746_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 4.7e-257 891.3 682 69.2
SHI33827 Sapria himalayana HOM05D005363 ORTHO05D006607 1.8e-256 889.4 722 65.7
Os04g0635900 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 5.4e-253 877.9 736 66.8
Lj8C160T16 Lonicera japonica HOM05D005363 ORTHO05D006607 1.2e-252 876.7 732 67.9
Peaxi162Scf00290g00111 Petunia axillaris HOM05D005363 ORTHO05D006607 4.3e-250 868.2 622 76.2
Zm00001eb069270 Zea mays HOM05D005363 ORTHO05D006607 2.3e-248 862.4 727 65.1
unitig_8.g4146 Utricularia gibba HOM05D005363 ORTHO05D006607 5.2e-248 861.3 722 64.1
MELO3C018187.2 Cucumis melo HOM05D005363 ORTHO05D006607 1.2e-247 860.1 711 66.5
VMungo1080G1535 Vigna mungo HOM05D005363 ORTHO05D006607 1.2e-247 860.1 476 85.5
Gorai.002G076500 Gossypium raimondii HOM05D005363 ORTHO05D006607 3.4e-247 858.6 729 66.8
Gohir.A04G025700 Gossypium hirsutum HOM05D005363 ORTHO05D006607 5.1e-243 844.7 734 67.0
AUR62015595 Chenopodium quinoa HOM05D005363 ORTHO05D006607 3.4e-231 805.4 517 76.4
AUR62029306 Chenopodium quinoa HOM05D005363 ORTHO05D006607 4.4e-231 805.1 790 57.8
Gohir.A04G026000 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.8e-219 766.5 626 70.3
FAN16G0276 Fragaria x ananassa HOM05D005363 ORTHO05D006607 8.7e-219 764.2 730 61.9
Mapoly0023s0117 Marchantia polymorpha HOM05D005363 ORTHO05D006607 1.1e-218 763.8 704 61.1
Pp3c24_2350 Physcomitrium patens HOM05D005363 ORTHO05D006607 1.1e-216 757.3 538 68.6
AagrBONN_evm.TU.Sc2ySwM_117.2240 Anthoceros agrestis HOM05D005363 ORTHO05D006607 7.4e-210 734.6 683 59.3
SMO347G0170 Selaginella moellendorffii HOM05D005363 ORTHO05D006607 2.9e-206 722.6 498 69.7
CDE12G0672 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 4.1e-200 702.2 404 83.2
Atru.chr2.2913 Acer truncatum HOM05D005363 ORTHO05D006607 1.8e-187 660.2 341 89.4
CBR_g48040 Chara braunii HOM05D005363 ORTHO05D006607 2.0e-178 630.2 544 57.2
Nitab4.5_0001969g0080 Nicotiana tabacum HOM05D005363 ORTHO05D006607 2.5e-173 613.2 633 57.8
Os08g0177600 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 2.7e-172 609.8 470 61.5
Zm00001eb171920 Zea mays HOM05D005363 ORTHO05D006607 1.0e-171 607.8 466 61.6
Ca_01813_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 3.2e-165 586.3 360 78.1
Eucgr.F01076 Eucalyptus grandis HOM05D005363 ORTHO05D006607 1.2e-162 577.8 550 64.2
Nitab4.5_0007366g0050 Nicotiana tabacum HOM05D005363 ORTHO05D006607 1.2e-140 504.6 492 60.4
Cre12.g556911 Chlamydomonas reinhardtii HOM05D005363 ORTHO05D006607 5.2e-131 472.6 502 49.0
MCO13G379 Micromonas commoda HOM05D005363 ORTHO05D006607 9.5e-125 451.8 525 47.0
unitig_13.g31430 Utricularia gibba HOM05D005363 ORTHO05D006607 1.6e-124 451.1 517 52.4
SEGI_22122 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 3.2e-120 436.8 255 78.0
PRCOL_00003292 Prasinoderma coloniale HOM05D005363 ORTHO05D006607 6.4e-113 412.5 519 45.7
Cfa025591 Carpinus fangiana HOM05D005363 ORTHO05D006607 3.0e-102 377.1 486 41.2
Nitab4.5_0007366g0060 Nicotiana tabacum HOM05D005363 ORTHO05D006607 6.2e-100 369.4 214 82.7
PGSC0003DMG400002669 Solanum tuberosum HOM05D005363 ORTHO05D006607 1.5e-90 338.2 179 88.3
CAN.G397.4 Capsicum annuum HOM05D005363 ORTHO05D006607 7.4e-85 319.3 263 62.7
Atru.chr2.2912 Acer truncatum HOM05D005363 ORTHO05D006607 2.8e-84 317.4 378 57.1
MBI09_g27609_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 7.2e-72 276.2 157 79.0
Eucgr.C01186 Eucalyptus grandis HOM05D005363 ORTHO05D006607 2.3e-62 244.6 358 54.5
CDE12G0057 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 4.1e-59 233.8 172 65.7
SEGI_32923 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 1.4e-43 182.2 97 87.6
CDE12G0487 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 2.7e-42 177.9 307 43.3
Ca_01800_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 1.5e-29 135.6 240 44.2
Ca_30473_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 5.8e-29 133.7 228 45.2
GSVIVG01001519001 Vitis vinifera HOM05D005363 ORTHO05D006607 6.4e-28 130.2 88 73.9
THA.LOC104811844 Tarenaya hassleriana HOM05D005363 ORTHO05D006607 3.2e-27 127.9 199 57.8
CDE12G0011 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 6.6e-25 120.2 76 82.9
SEGI_35588 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 3.3e-24 117.9 300 39.7
arahy.Tifrunner.gnm1.ann1.Q8WXS4 Arachis hypogaea HOM05D005363 ORTHO05D006607 2.0e-13 82.0 120 45.0
Cc06_g05450 Coffea canephora HOM05D005363 ORTHO05D006607 3.5e-10 71.2 224 40.6


User provided reference genes

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