Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62042657 Chenopodium quinoa HOM05D004178 ORTHO05D005204 9.8e-119 430.3 233 100.0
AUR62015432 Chenopodium quinoa HOM05D004178 ORTHO05D005204 3.3e-50 202.6 314 47.5
AUR62002220 Chenopodium quinoa HOM05D004178 ORTHO05D005204 4.5e-47 192.2 314 46.2
Ah.07g207660 Amaranthus hybridus HOM05D004178 ORTHO05D005204 1.9e-45 186.8 230 52.6
Ah.02g120680 Amaranthus hybridus HOM05D004178 ORTHO05D005204 4.2e-45 185.7 253 52.6
EL10Ac3g05856 Beta vulgaris HOM05D004178 ORTHO05D005204 3.3e-42 176.0 249 50.6
Lj1C978G4 Lonicera japonica HOM05D004178 ORTHO05D005204 2.4e-40 169.9 228 46.5
TAR375G0252 Trochodendron aralioides HOM05D004178 ORTHO05D005204 4.5e-39 165.6 231 46.3
Dinv06570 Davidia involucrata HOM05D004178 ORTHO05D005204 5.9e-39 165.2 234 45.7
Nitab4.5_0003647g0020 Nicotiana tabacum HOM05D004178 ORTHO05D005204 1.3e-38 164.1 232 45.3
GSVIVG01013865001 Vitis vinifera HOM05D004178 ORTHO05D005204 1.3e-38 164.1 233 45.9
Peaxi162Scf00167g00610 Petunia axillaris HOM05D004178 ORTHO05D005204 1.7e-38 163.7 232 45.7
Sp2g24660 Schrenkiella parvula HOM05D004178 ORTHO05D005204 3.8e-38 162.5 185 50.8
PGSC0003DMG400014287 Solanum tuberosum HOM05D004178 ORTHO05D005204 3.8e-38 162.5 232 44.8
CAN.G515.9 Capsicum annuum HOM05D004178 ORTHO05D005204 8.5e-38 161.4 200 49.5
Nitab4.5_0000818g0230 Nicotiana tabacum HOM05D004178 ORTHO05D005204 1.1e-37 161.0 231 44.6
QL09p005323 Quercus lobata HOM05D004178 ORTHO05D005204 1.1e-37 161.0 234 44.4
FAN03G3201 Fragaria x ananassa HOM05D004178 ORTHO05D005204 1.4e-37 160.6 241 43.2
FAN06G2180 Fragaria x ananassa HOM05D004178 ORTHO05D005204 1.9e-37 160.2 232 44.8
Nn6g33950 Nelumbo nucifera HOM05D004178 ORTHO05D005204 1.9e-37 160.2 185 50.8
PSO063G1916 Papaver somniferum HOM05D004178 ORTHO05D005204 1.9e-37 160.2 207 45.9
Solyc05g051680.4 Solanum lycopersicum HOM05D004178 ORTHO05D005204 1.9e-37 160.2 232 44.8
FAN10G0409 Fragaria x ananassa HOM05D004178 ORTHO05D005204 2.5e-37 159.8 230 44.8
Cfa008151 Carpinus fangiana HOM05D004178 ORTHO05D005204 4.2e-37 159.1 232 45.3
Potri.003G107700 Populus trichocarpa HOM05D004178 ORTHO05D005204 4.2e-37 159.1 185 51.9
Sopen05g030150 Solanum pennellii HOM05D004178 ORTHO05D005204 4.2e-37 159.1 232 44.4
FvH4_7g27291 Fragaria vesca HOM05D004178 ORTHO05D005204 5.5e-37 158.7 232 44.4
FAN01G0652 Fragaria x ananassa HOM05D004178 ORTHO05D005204 5.5e-37 158.7 230 44.3
FAN06G0596 Fragaria x ananassa HOM05D004178 ORTHO05D005204 5.5e-37 158.7 232 44.4
SGA_v2.0_scaffold2G01219 Striga asiatica HOM05D004178 ORTHO05D005204 5.5e-37 158.7 181 49.2
ECA232G0935 Erigeron canadensis HOM05D004178 ORTHO05D005204 7.2e-37 158.3 203 47.8
MELO3C017663.2 Cucumis melo HOM05D004178 ORTHO05D005204 9.3e-37 157.9 228 44.7
Carub.0008s2215 Capsella rubella HOM05D004178 ORTHO05D005204 2.1e-36 156.8 185 50.3
Psat3g047440 Pisum sativum HOM05D004178 ORTHO05D005204 2.7e-36 156.4 157 54.8
Prupe.2G275800 Prunus persica HOM05D004178 ORTHO05D005204 2.7e-36 156.4 221 47.1
CsaV3_4G004020 Cucumis sativus L. HOM05D004178 ORTHO05D005204 3.6e-36 156.0 185 51.9
Medtr4g036760 Medicago truncatula HOM05D004178 ORTHO05D005204 3.6e-36 156.0 189 50.8
TWI14G1279 Tripterygium wilfordii HOM05D004178 ORTHO05D005204 3.6e-36 156.0 215 49.3
BcaC06g33151 Brassica carinata HOM05D004178 ORTHO05D005204 4.6e-36 155.6 228 43.4
Ca_30729_v3 Cicer arietinum L. HOM05D004178 ORTHO05D005204 4.6e-36 155.6 187 48.7
HanXRQChr01g0028141 Helianthus annuus HOM05D004178 ORTHO05D005204 4.6e-36 155.6 187 49.7
BolC2t06288H Brassica oleracea HOM05D004178 ORTHO05D005204 6.1e-36 155.2 140 61.4
Thhalv10003566m.g Eutrema salsugineum HOM05D004178 ORTHO05D005204 6.1e-36 155.2 185 49.2
Manes.06G133600 Manihot esculenta HOM05D004178 ORTHO05D005204 6.1e-36 155.2 230 44.3
Oeu021706.1 Olea europaea HOM05D004178 ORTHO05D005204 6.1e-36 155.2 187 50.3
TPR.G3678 Trifolium pratense HOM05D004178 ORTHO05D005204 6.1e-36 155.2 172 52.3
A03p47060 Brassica napus HOM05D004178 ORTHO05D005204 7.9e-36 154.8 228 43.0
BraA03t13829Z Brassica rapa HOM05D004178 ORTHO05D005204 7.9e-36 154.8 228 43.0
Duzib084G0917 Durio zibethinus HOM05D004178 ORTHO05D005204 7.9e-36 154.8 185 50.8
AL8G38150 Arabidopsis lyrata HOM05D004178 ORTHO05D005204 1.0e-35 154.5 226 43.8
AT5G07660 Arabidopsis thaliana HOM05D004178 ORTHO05D005204 1.0e-35 154.5 236 44.5
BcaC06g33236 Brassica carinata HOM05D004178 ORTHO05D005204 1.0e-35 154.5 228 42.5
C07p45140 Brassica napus HOM05D004178 ORTHO05D005204 1.0e-35 154.5 228 42.5
BolC7t45036H Brassica oleracea HOM05D004178 ORTHO05D005204 1.0e-35 154.5 228 42.5
AL6G18000 Arabidopsis lyrata HOM05D004178 ORTHO05D005204 1.3e-35 154.1 233 42.9
MSTRG.8830 Avicennia marina HOM05D004178 ORTHO05D005204 1.3e-35 154.1 235 43.4
Ciclev10004204m.g Citrus clementina HOM05D004178 ORTHO05D005204 1.3e-35 154.1 234 44.9
TPR.G2991 Trifolium pratense HOM05D004178 ORTHO05D005204 2.3e-35 153.3 187 48.1
AT5G61460 Arabidopsis thaliana HOM05D004178 ORTHO05D005204 3.0e-35 152.9 185 50.3
BraA02t04928Z Brassica rapa HOM05D004178 ORTHO05D005204 3.0e-35 152.9 178 51.7
CDE11G0310 Ceratophyllum demersum HOM05D004178 ORTHO05D005204 3.0e-35 152.9 187 49.7
Haze_13892 Corylus avellana HOM05D004178 ORTHO05D005204 3.0e-35 152.9 246 42.7
Lj3g0020737 Lotus japonicus HOM05D004178 ORTHO05D005204 3.0e-35 152.9 187 48.7
Atru.chr1.752 Acer truncatum HOM05D004178 ORTHO05D005204 3.9e-35 152.5 230 43.5
Eucgr.A02900 Eucalyptus grandis HOM05D004178 ORTHO05D005204 5.1e-35 152.1 226 43.8
Lsat_1_v5_gn_9_51940 Lactuca sativa HOM05D004178 ORTHO05D005204 5.1e-35 152.1 189 49.2
Carub.0006s0663 Capsella rubella HOM05D004178 ORTHO05D005204 6.7e-35 151.8 238 44.5
Migut.F00486 Erythranthe guttata HOM05D004178 ORTHO05D005204 6.7e-35 151.8 233 42.5
Thhalv10012532m.g Eutrema salsugineum HOM05D004178 ORTHO05D005204 6.7e-35 151.8 185 48.1
Psat7g194520 Pisum sativum HOM05D004178 ORTHO05D005204 6.7e-35 151.8 237 41.4
RcHm_v2.0_Chr1g0374131 Rosa chinensis HOM05D004178 ORTHO05D005204 6.7e-35 151.8 236 43.2
C02p03240 Brassica napus HOM05D004178 ORTHO05D005204 8.7e-35 151.4 165 53.9
Thecc.03G153700 Theobroma cacao HOM05D004178 ORTHO05D005204 1.1e-34 151.0 185 50.3
MD07G1252300 Malus domestica HOM05D004178 ORTHO05D005204 1.5e-34 150.6 234 43.6
Sed0013674 Sechium edule HOM05D004178 ORTHO05D005204 1.5e-34 150.6 185 50.8
unitig_37.g12493 Utricularia gibba HOM05D004178 ORTHO05D005204 1.5e-34 150.6 172 50.6
ATR0317G120 Amborella trichopoda HOM05D004178 ORTHO05D005204 1.9e-34 150.2 203 47.3
Medtr4g061050 Medicago truncatula HOM05D004178 ORTHO05D005204 1.9e-34 150.2 187 48.1
CARHR275220 Cardamine hirsuta HOM05D004178 ORTHO05D005204 2.5e-34 149.8 185 48.6
PGR042G0822 Punica granatum HOM05D004178 ORTHO05D005204 2.5e-34 149.8 233 41.6
CSS0036077 Camellia sinensis var. sinensis HOM05D004178 ORTHO05D005204 3.3e-34 149.4 234 43.2
COL.COLO4_14102 Corchorus olitorius HOM05D004178 ORTHO05D005204 4.3e-34 149.1 238 42.9
Glyma.09G229900 Glycine max HOM05D004178 ORTHO05D005204 7.4e-34 148.3 232 43.1
ClCG07G016820 Citrullus lanatus HOM05D004178 ORTHO05D005204 9.7e-34 147.9 231 43.3
PSO782G3243 Papaver somniferum HOM05D004178 ORTHO05D005204 9.7e-34 147.9 191 46.6
CANSAT56G2947 Cannabis sativa HOM05D004178 ORTHO05D005204 1.3e-33 147.5 232 41.4
Aqoxy5G03870 Aquilegia oxysepala HOM05D004178 ORTHO05D005204 2.2e-33 146.7 234 43.6
Gohir.D12G200300 Gossypium hirsutum HOM05D004178 ORTHO05D005204 2.2e-33 146.7 174 52.9
Gorai.008G215500 Gossypium raimondii HOM05D004178 ORTHO05D005204 2.2e-33 146.7 174 52.9
Phvul.011G007300 Phaseolus vulgaris HOM05D004178 ORTHO05D005204 2.8e-33 146.4 233 43.8
CiPaw.03G020700 Carya illinoinensis HOM05D004178 ORTHO05D005204 3.7e-33 146.0 232 42.7
Gohir.A12G197800 Gossypium hirsutum HOM05D004178 ORTHO05D005204 3.7e-33 146.0 174 52.9
Zm00001eb309160 Zea mays HOM05D004178 ORTHO05D005204 4.8e-33 145.6 207 45.4
Actinidia13583 Actinidia chinensis HOM05D004178 ORTHO05D005204 8.2e-33 144.8 234 42.3
HPP92_027283 Vanilla planifolia HOM05D004178 ORTHO05D005204 1.1e-32 144.4 201 43.3
BcaB05g21602 Brassica carinata HOM05D004178 ORTHO05D005204 2.4e-32 143.3 178 48.9
BcaNung06187 Brassica carinata HOM05D004178 ORTHO05D005204 2.4e-32 143.3 178 48.9
SalBow5G4122 Salvia bowleyana HOM05D004178 ORTHO05D005204 3.1e-32 142.9 234 39.7
AL1G57860 Arabidopsis lyrata HOM05D004178 ORTHO05D005039 6.9e-32 141.7 166 54.2
arahy.Tifrunner.gnm1.ann1.2YP1UN Arachis hypogaea HOM05D004178 ORTHO05D005204 6.9e-32 141.7 231 41.1
VMungo1127G0288 Vigna mungo HOM05D004178 ORTHO05D005204 6.9e-32 141.7 232 41.8
arahy.Tifrunner.gnm1.ann1.D3FWW6 Arachis hypogaea HOM05D004178 ORTHO05D005204 2.6e-31 139.8 233 41.6
Cc02_g04400 Coffea canephora HOM05D004178 ORTHO05D005204 2.6e-31 139.8 228 40.4
Aa31LG11G1940 Aethionema arabicum HOM05D004178 ORTHO05D005204 1.7e-30 137.1 250 38.4
vmacro06815 Vaccinium macrocarpon HOM05D004178 ORTHO05D005204 5.5e-29 132.1 230 41.3
Rhsim03G0166000 Rhododendron simsii HOM05D004178 ORTHO05D005204 9.4e-29 131.3 232 40.1
Pp3c11_11190 Physcomitrium patens HOM05D004178 ORTHO05D005204 2.1e-28 130.2 165 45.5
Glyma.12G006400 Glycine max HOM05D004178 ORTHO05D005204 2.6e-26 123.2 106 65.1
AagrBONN_evm.TU.Sc2ySwM_228.971 Anthoceros agrestis HOM05D004178 ORTHO05D005204 3.3e-26 122.9 159 44.0
Lalb_Chr19g0140351 Lupinus albus HOM05D004178 ORTHO05D005204 3.3e-26 122.9 274 33.9
Sabra03G0074500 Salix brachista HOM05D004178 ORTHO05D005204 7.4e-26 121.7 289 35.6
Ca_02789_v3 Cicer arietinum L. HOM05D004178 ORTHO05D005204 8.2e-25 118.2 88 67.0
SMO364G0410 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 5.3e-24 115.5 244 38.1
Mapoly0003s0057 Marchantia polymorpha HOM05D004178 ORTHO05D005204 1.4e-21 107.5 239 33.5
CBR_g34600 Chara braunii HOM05D000019 ORTHO05D000048 9.4e-21 104.8 90 55.6
Cpa.g.sc1936.1 Carica papaya HOM05D004178 ORTHO05D005204 2.6e-18 96.7 126 46.8
SHI13977 Sapria himalayana HOM05D004178 ORTHO05D005204 5.7e-18 95.5 124 49.2
MCO11G708 Micromonas commoda HOM05D004178 ORTHO05D005204 2.8e-17 93.2 166 36.7
BcaC03g13191 Brassica carinata HOM05D004178 ORTHO05D005204 2.6e-15 86.7 123 43.1
Haze_26632 Corylus avellana HOM05D004178 ORTHO05D005204 1.0e-11 74.7 186 29.0
DCAR_014619 Daucus carota HOM05D004178 ORTHO05D005204 1.4e-11 74.3 122 43.4
SMO117G0047 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 4.4e-10 69.3 142 30.3
PRCOL_00006025 Prasinoderma coloniale HOM05D004178 ORTHO05D005204 9.7e-10 68.2 112 35.7
SMO137G0368 Selaginella moellendorffii HOM05D027672 ORTHO05D005204 2.0e-07 60.5 130 30.8
SMO202G0076 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 2.7e-07 60.1 140 30.0
Cfa025728 Carpinus fangiana HOM05D004178 ORTHO05D005204 1.3e-06 57.8 102 30.4
Sc19g0002080 Simmondsia chinensis HOM05D004178 ORTHO05D005204 1.7e-06 57.4 139 36.7
SMO302G0053 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 5.0e-06 55.8 146 34.2


User provided reference genes

Program Settings