Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62037473 Chenopodium quinoa HOM05D006776 ORTHO05D007603 1.6e-191 672.5 331 100.0
AUR62038776 Chenopodium quinoa HOM05D006776 ORTHO05D007603 5.4e-155 551.2 281 97.2
EL10Ac1g02384 Beta vulgaris HOM05D006776 ORTHO05D007603 2.3e-145 519.2 299 87.0
Ah.11g042830 Amaranthus hybridus HOM05D006776 ORTHO05D007603 2.4e-131 472.6 299 79.3
Sc15g0005690 Simmondsia chinensis HOM05D006776 ORTHO05D007603 3.5e-130 468.8 303 75.9
Hund23872 Selenicereus undatus HOM05D006776 ORTHO05D007603 5.1e-129 464.9 297 77.4
MD15G1070100 Malus domestica HOM05D006776 ORTHO05D007603 1.1e-123 447.2 303 72.6
Atru.chr13.832 Acer truncatum HOM05D006776 ORTHO05D007603 1.9e-123 446.4 297 72.4
RcHm_v2.0_Chr6g0309581 Rosa chinensis HOM05D006776 ORTHO05D007603 1.9e-123 446.4 299 72.9
Manes.05G181900 Manihot esculenta HOM05D006776 ORTHO05D007603 3.2e-123 445.7 298 73.2
FvH4_2g33100 Fragaria vesca HOM05D006776 ORTHO05D007603 4.2e-123 445.3 299 73.6
FAN24G3456 Fragaria x ananassa HOM05D006776 ORTHO05D007603 2.1e-122 443.0 299 72.9
FAN27G1522 Fragaria x ananassa HOM05D006776 ORTHO05D007603 2.1e-122 443.0 299 72.9
CiPaw.07G175000 Carya illinoinensis HOM05D006776 ORTHO05D007603 3.5e-122 442.2 310 71.3
Haze_22436 Corylus avellana HOM05D006776 ORTHO05D007603 4.6e-122 441.8 290 75.2
FAN20G0940 Fragaria x ananassa HOM05D006776 ORTHO05D007603 6.0e-122 441.4 299 72.6
Dinv39223 Davidia involucrata HOM05D006776 ORTHO05D007603 1.0e-121 440.7 300 72.3
Prupe.1G422900 Prunus persica HOM05D006776 ORTHO05D007603 1.3e-121 440.3 295 73.6
FAN15G0723 Fragaria x ananassa HOM05D006776 ORTHO05D007603 2.3e-121 439.5 299 72.6
GSVIVG01009344001 Vitis vinifera HOM05D006776 ORTHO05D007603 2.3e-121 439.5 308 69.8
CSS0038791 Camellia sinensis var. sinensis HOM05D006776 ORTHO05D007603 5.1e-121 438.3 302 71.2
arahy.Tifrunner.gnm1.ann1.SBJ000 Arachis hypogaea HOM05D006776 ORTHO05D007603 6.6e-121 438.0 298 71.8
arahy.Tifrunner.gnm1.ann1.YEFH3D Arachis hypogaea HOM05D006776 ORTHO05D007603 8.7e-121 437.6 298 71.8
Gohir.D05G213300 Gossypium hirsutum HOM05D006776 ORTHO05D007603 4.8e-119 431.8 297 71.4
Actinidia08248 Actinidia chinensis HOM05D006776 ORTHO05D007603 6.2e-119 431.4 300 71.0
CANSAT21G2159 Cannabis sativa HOM05D006776 ORTHO05D007603 6.2e-119 431.4 295 72.5
Gohir.A05G210000 Gossypium hirsutum HOM05D006776 ORTHO05D007603 1.1e-118 430.6 297 71.0
Cc10_g05780 Coffea canephora HOM05D006776 ORTHO05D007603 4.0e-118 428.7 300 71.0
Potri.014G016100 Populus trichocarpa HOM05D006776 ORTHO05D007603 6.9e-118 427.9 305 70.8
Thecc.08G088800 Theobroma cacao HOM05D006776 ORTHO05D007603 9.0e-118 427.6 298 70.1
Cpa.g.sc142.25 Carica papaya HOM05D006776 ORTHO05D007603 1.2e-117 427.2 298 68.8
Rhsim07G0219900 Rhododendron simsii HOM05D006776 ORTHO05D007603 1.5e-117 426.8 306 69.6
MSTRG.22221 Avicennia marina HOM05D006776 ORTHO05D007603 2.6e-117 426.0 297 70.4
COL.COLO4_28506 Corchorus olitorius HOM05D006776 ORTHO05D007603 4.5e-117 425.2 298 69.5
PGSC0003DMG400011544 Solanum tuberosum HOM05D006776 ORTHO05D007603 9.9e-117 424.1 299 69.9
Ciclev10001152m.g Citrus clementina HOM05D006776 ORTHO05D007603 1.7e-116 423.3 294 72.1
QL12p038088 Quercus lobata HOM05D006776 ORTHO05D007603 1.7e-116 423.3 334 64.7
vmacro22055 Vaccinium macrocarpon HOM05D006776 ORTHO05D007603 1.7e-116 423.3 322 66.8
Lalb_Chr11g0062871 Lupinus albus HOM05D006776 ORTHO05D007603 2.9e-116 422.5 287 71.8
PGR083G0271 Punica granatum HOM05D006776 ORTHO05D007603 3.8e-116 422.2 289 74.0
Lsat_1_v5_gn_4_131640 Lactuca sativa HOM05D006776 ORTHO05D007603 6.4e-116 421.4 293 71.7
TAR376G1186 Trochodendron aralioides HOM05D006776 ORTHO05D007603 8.4e-116 421.0 303 70.3
Nitab4.5_0008551g0030 Nicotiana tabacum HOM05D006776 ORTHO05D007603 1.1e-115 420.6 297 70.0
Nitab4.5_0002314g0100 Nicotiana tabacum HOM05D006776 ORTHO05D007603 2.4e-115 419.5 299 69.2
SGA_v2.0_scaffold152G36804 Striga asiatica HOM05D006776 ORTHO05D007603 4.2e-115 418.7 296 69.3
Migut.N02781 Erythranthe guttata HOM05D006776 ORTHO05D007603 9.3e-115 417.5 298 69.8
Sopen12g030330 Solanum pennellii HOM05D006776 ORTHO05D007603 2.1e-114 416.4 299 68.6
ECA232G1156 Erigeron canadensis HOM05D006776 ORTHO05D007603 2.7e-114 416.0 289 69.9
HanXRQChr09g0266761 Helianthus annuus HOM05D006776 ORTHO05D007603 3.5e-114 415.6 279 71.7
Hma1.2p1_0819F.1_g223710 Hydrangea macrophylla HOM05D006776 ORTHO05D007603 4.6e-114 415.2 297 69.4
Psat5g038960 Pisum sativum HOM05D006776 ORTHO05D007603 4.6e-114 415.2 297 69.4
Solyc12g088340.2 Solanum lycopersicum HOM05D006776 ORTHO05D007603 6.0e-114 414.8 299 68.6
Glyma.04G045700 Glycine max HOM05D006776 ORTHO05D007603 1.0e-113 414.1 294 69.4
Nn1g04555 Nelumbo nucifera HOM05D006776 ORTHO05D007603 1.0e-113 414.1 290 69.7
VMungo1309G0963 Vigna mungo HOM05D006776 ORTHO05D007603 1.0e-113 414.1 296 69.3
Medtr3g103170 Medicago truncatula HOM05D006776 ORTHO05D007603 1.3e-113 413.7 304 68.1
Phvul.009G071700 Phaseolus vulgaris HOM05D006776 ORTHO05D007603 2.3e-113 412.9 304 68.8
Aqoxy5G00870 Aquilegia oxysepala HOM05D006776 ORTHO05D007603 3.0e-113 412.5 288 70.1
Eucgr.F00083 Eucalyptus grandis HOM05D006776 ORTHO05D007603 1.1e-112 410.6 288 71.2
Oeu053611.1 Olea europaea HOM05D006776 ORTHO05D007603 1.1e-112 410.6 300 68.0
Sabra14G0010000 Salix brachista HOM05D006776 ORTHO05D007603 1.5e-112 410.2 309 68.3
PSO017G0681 Papaver somniferum HOM05D006776 ORTHO05D007603 3.3e-112 409.1 302 66.2
TPR.G33723 Trifolium pratense HOM05D006776 ORTHO05D007603 4.3e-112 408.7 304 66.4
Glyma.06G046400 Glycine max HOM05D006776 ORTHO05D007603 9.6e-112 407.5 287 69.3
PSO170G0170 Papaver somniferum HOM05D006776 ORTHO05D007603 1.6e-111 406.8 300 66.3
CsaV3_2G026140 Cucumis sativus L. HOM05D006776 ORTHO05D007603 2.8e-111 406.0 292 67.5
Cfa013778 Carpinus fangiana HOM05D006776 ORTHO05D007603 3.7e-111 405.6 290 70.0
Ca_15900_v3 Cicer arietinum L. HOM05D006776 ORTHO05D007603 1.4e-110 403.7 287 68.6
Lj1g0026753 Lotus japonicus HOM05D006776 ORTHO05D007603 2.4e-110 402.9 296 67.2
Peaxi162Scf00160g00527 Petunia axillaris HOM05D006776 ORTHO05D007603 3.1e-110 402.5 297 68.4
TWI56G0429 Tripterygium wilfordii HOM05D006776 ORTHO05D007603 3.1e-110 402.5 302 66.9
Lj4A758G74 Lonicera japonica HOM05D006776 ORTHO05D007603 9.0e-110 401.0 278 71.2
Sed0026542 Sechium edule HOM05D006776 ORTHO05D007603 3.4e-109 399.1 290 66.2
DCAR_012816 Daucus carota HOM05D006776 ORTHO05D007603 4.9e-108 395.2 290 67.6
Gorai.009G219900 Gossypium raimondii HOM05D006776 ORTHO05D007603 8.4e-108 394.4 274 70.8
ClCG08G016470 Citrullus lanatus HOM05D006776 ORTHO05D007603 1.9e-107 393.3 300 64.0
MELO3C010806.2 Cucumis melo HOM05D006776 ORTHO05D007603 1.9e-107 393.3 297 65.7
THA.LOC104814190 Tarenaya hassleriana HOM05D006776 ORTHO05D007603 3.5e-106 389.0 292 66.1
HPP92_001976 Vanilla planifolia HOM05D006776 ORTHO05D007603 7.9e-106 387.9 304 62.5
CDE04G2973 Ceratophyllum demersum HOM05D006776 ORTHO05D007603 1.0e-105 387.5 293 67.2
unitig_578.g16149 Utricularia gibba HOM05D006776 ORTHO05D007603 1.8e-105 386.7 296 65.5
ATR0820G216 Amborella trichopoda HOM05D006776 ORTHO05D007603 8.7e-105 384.4 301 62.5
AT1G27840 Arabidopsis thaliana HOM05D006776 ORTHO05D007603 1.1e-104 384.0 300 65.3
Sp1g24040 Schrenkiella parvula HOM05D006776 ORTHO05D007603 2.5e-104 382.9 310 61.9
Zm00001eb147340 Zea mays HOM05D006776 ORTHO05D007603 4.3e-104 382.1 298 64.4
BcaNung06155 Brassica carinata HOM05D006776 ORTHO05D007603 7.4e-104 381.3 310 62.3
C05p26470 Brassica napus HOM05D006776 ORTHO05D007603 9.6e-104 380.9 310 61.9
AL1G41330 Arabidopsis lyrata HOM05D006776 ORTHO05D007603 1.6e-103 380.2 300 64.3
A09p38320 Brassica napus HOM05D006776 ORTHO05D007603 4.8e-103 378.6 310 61.9
BolC5t31368H Brassica oleracea HOM05D006776 ORTHO05D007603 4.8e-103 378.6 310 61.3
CARHR027300 Cardamine hirsuta HOM05D006776 ORTHO05D007603 5.3e-102 375.2 306 63.4
BraA09t39342Z Brassica rapa HOM05D006776 ORTHO05D007603 1.5e-101 373.6 311 61.1
AT1G19750 Arabidopsis thaliana HOM05D006776 ORTHO05D007603 1.9e-99 366.7 298 63.1
Carub.0001s2630 Capsella rubella HOM05D006776 ORTHO05D007603 2.5e-99 366.3 296 64.2
Aa31sc113G60 Aethionema arabicum HOM05D006776 ORTHO05D007603 3.9e-97 359.0 328 58.8
BcaNung06153 Brassica carinata HOM05D006776 ORTHO05D007603 5.7e-96 355.1 299 61.5
Thhalv10007615m.g Eutrema salsugineum HOM05D006776 ORTHO05D007603 2.8e-95 352.8 272 65.8
Duzib116G0586 Durio zibethinus HOM05D006776 ORTHO05D007603 3.1e-94 349.4 244 71.3
Hma1.2p1_0819F.1_g223700 Hydrangea macrophylla HOM05D006776 ORTHO05D007603 1.7e-92 343.6 245 71.0
MD08G1082700 Malus domestica HOM05D006776 ORTHO05D007603 3.9e-89 332.4 289 61.6
Mapoly0043s0035 Marchantia polymorpha HOM05D006776 ORTHO05D007603 1.8e-81 307.0 289 53.6
SMO203G0215 Selaginella moellendorffii HOM05D006776 ORTHO05D007603 6.7e-81 305.1 280 52.1
AagrBONN_evm.TU.Sc2ySwM_228.2971 Anthoceros agrestis HOM05D006776 ORTHO05D007603 2.6e-80 303.1 288 51.7
Pp3c22_5850 Physcomitrium patens HOM05D006776 ORTHO05D007603 3.3e-80 302.8 286 52.4
MD08G1084000 Malus domestica HOM05D006776 ORTHO05D007603 4.1e-78 295.8 241 63.1
SEGI_36074 Sequoiadendron giganteum HOM05D006776 ORTHO05D007603 3.6e-66 256.1 224 56.7
CDE02G3909 Ceratophyllum demersum HOM05D006776 ORTHO05D007603 1.5e-59 234.2 274 47.8
CBR_g4873 Chara braunii HOM05D006776 ORTHO05D007603 2.3e-57 226.9 369 36.9
SMO353G0131 Selaginella moellendorffii HOM05D006776 ORTHO05D007603 1.4e-54 217.6 273 43.2
BcaC05g26777 Brassica carinata HOM05D006776 ORTHO05D007603 5.4e-54 215.7 314 43.9
MCO02G266 Micromonas commoda HOM05D006776 ORTHO05D007603 1.2e-40 171.4 290 36.2
Cre01.g032100 Chlamydomonas reinhardtii HOM05D006776 ORTHO05D007603 1.1e-35 154.8 279 33.0
PRCOL_00002749 Prasinoderma coloniale HOM05D006776 ORTHO05D007603 8.1e-26 122.1 272 31.2
Os02g0307200 Oryza sativa ssp. japonica HOM05D006776 ORTHO05D007603 5.2e-17 92.8 51 84.3
SEGI_38356 Sequoiadendron giganteum HOM05D006776 ORTHO05D007603 7.6e-16 89.0 68 61.8
CSS0037820 Camellia sinensis var. sinensis HOM05D000526 ORTHO05D000956 6.4e-07 59.3 169 29.6
Lj1g0006709 Lotus japonicus HOM05D000526 ORTHO05D000956 1.9e-06 57.8 169 28.4
Lj3g0012644 Lotus japonicus HOM05D000526 ORTHO05D000956 1.9e-06 57.8 169 28.4


User provided reference genes

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