Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62035551 Chenopodium quinoa HOM05D005626 ORTHO05D007372 9.4e-258 893.3 536 100.0
AUR62006074 Chenopodium quinoa HOM05D005626 ORTHO05D007372 3.1e-184 649.0 567 75.5
EL10Ac3g05260 Beta vulgaris HOM05D005626 ORTHO05D007372 3.9e-155 552.4 576 60.6
Hund11648 Selenicereus undatus HOM05D005626 ORTHO05D007372 1.9e-149 533.5 583 65.9
Ah.07g205460 Amaranthus hybridus HOM05D005626 ORTHO05D007372 2.1e-140 503.4 618 59.9
GSVIVG01038569001 Vitis vinifera HOM05D005626 ORTHO05D007372 2.7e-119 433.3 568 54.9
Manes.06G012351 Manihot esculenta HOM05D005626 ORTHO05D007372 1.2e-114 417.9 591 47.2
Cfa016215 Carpinus fangiana HOM05D005626 ORTHO05D007372 7.7e-111 405.2 584 53.1
Actinidia18659 Actinidia chinensis HOM05D005626 ORTHO05D007372 1.1e-109 401.4 587 52.6
Thecc.03G201200 Theobroma cacao HOM05D005626 ORTHO05D007372 3.2e-109 399.8 591 54.8
Atru.chr12.2245_Atru.chr12.2244 Acer truncatum HOM05D005626 ORTHO05D007372 2.3e-107 393.7 489 52.8
Prupe.2G313200 Prunus persica HOM05D005626 ORTHO05D007372 6.8e-107 392.1 582 52.9
TAR375G0360 Trochodendron aralioides HOM05D005626 ORTHO05D007372 8.8e-107 391.7 593 53.0
Gohir.D09G179900 Gossypium hirsutum HOM05D005626 ORTHO05D007372 1.5e-106 391.0 489 60.1
CSS0003989 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 9.8e-106 388.3 650 46.3
QL09p008055 Quercus lobata HOM05D005626 ORTHO05D007372 1.7e-105 387.5 475 54.5
CANSAT21G0821 Cannabis sativa HOM05D005626 ORTHO05D007372 2.2e-105 387.1 498 52.6
CSS0044766 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.1e-104 384.8 550 56.0
THA.LOC104799967 Tarenaya hassleriana HOM05D005626 ORTHO05D007372 2.4e-104 383.6 541 51.8
MD01G1222800 Malus domestica HOM05D005626 ORTHO05D007372 5.4e-104 382.5 583 53.5
QL09p007984 Quercus lobata HOM05D005626 ORTHO05D007372 5.4e-104 382.5 596 51.8
Gorai.006G201900 Gossypium raimondii HOM05D005626 ORTHO05D007372 1.2e-103 381.3 632 46.5
Migut.F00199 Erythranthe guttata HOM05D005626 ORTHO05D007372 3.5e-103 379.8 584 46.4
CiPaw.06G045100 Carya illinoinensis HOM05D005626 ORTHO05D007372 2.9e-102 376.7 582 52.9
MBI07_g24765_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 3.3e-101 373.2 512 43.8
Cc02_g01370 Coffea canephora HOM05D005626 ORTHO05D007372 9.5e-101 371.7 538 46.5
PGR042G1168 Punica granatum HOM05D005626 ORTHO05D007372 5.4e-96 355.9 562 51.2
Nitab4.5_0005491g0050 Nicotiana tabacum HOM05D005626 ORTHO05D007372 9.2e-96 355.1 543 46.0
Sopen03g022800 Solanum pennellii HOM05D005626 ORTHO05D007372 1.7e-94 350.9 582 44.5
arahy.Tifrunner.gnm1.ann1.ULB6CG Arachis hypogaea HOM05D005626 ORTHO05D007372 8.6e-94 348.6 594 45.6
Nn1g00302 Nelumbo nucifera HOM05D005626 ORTHO05D007372 8.6e-94 348.6 594 49.5
Solyc03g082990.3 Solanum lycopersicum HOM05D005626 ORTHO05D007372 4.3e-93 346.3 582 44.2
Dinv29256 Davidia involucrata HOM05D005626 ORTHO05D007372 1.2e-92 344.7 581 44.9
Duzib084G0104 Durio zibethinus HOM05D005626 ORTHO05D007372 3.6e-92 343.2 587 50.6
Ciclev10020013m.g Citrus clementina HOM05D005626 ORTHO05D007372 1.1e-91 341.7 486 56.2
Potri.015G010800 Populus trichocarpa HOM05D005626 ORTHO05D007372 2.9e-89 333.6 596 42.8
Sc25g0000940 Simmondsia chinensis HOM05D005626 ORTHO05D007372 3.7e-89 333.2 440 58.6
Lj1g0019302 Lotus japonicus HOM05D005626 ORTHO05D007372 1.2e-87 328.2 578 49.8
Aqoxy5G04311 Aquilegia oxysepala HOM05D005626 ORTHO05D007372 1.0e-86 325.1 593 47.7
TPR.G33639 Trifolium pratense HOM05D005626 ORTHO05D007372 1.0e-86 325.1 544 49.6
CAN.G481.28 Capsicum annuum HOM05D005626 ORTHO05D007372 1.7e-86 324.3 471 46.3
COL.COLO4_16792 Corchorus olitorius HOM05D005626 ORTHO05D007032 3.9e-86 323.2 563 50.8
Eucgr.A01448 Eucalyptus grandis HOM05D005626 ORTHO05D007372 5.0e-86 322.8 510 44.7
FvH4_7g31990 Fragaria vesca HOM05D005626 ORTHO05D007372 6.6e-86 322.4 522 52.9
Peaxi162Scf00740g00226 Petunia axillaris HOM05D005626 ORTHO05D007372 1.1e-85 321.6 489 48.1
arahy.Tifrunner.gnm1.ann1.DCMH6Q Arachis hypogaea HOM05D005626 ORTHO05D007372 1.5e-85 321.2 470 50.2
TWI39G0896 Tripterygium wilfordii HOM05D005626 ORTHO05D007372 1.9e-85 320.9 489 54.6
arahy.Tifrunner.gnm1.ann1.CHU3M4 Arachis hypogaea HOM05D005626 ORTHO05D007372 3.3e-85 320.1 592 43.8
FAN06G4319 Fragaria x ananassa HOM05D005626 ORTHO05D007372 3.3e-85 320.1 493 55.0
Haze_00226 Corylus avellana HOM05D005626 ORTHO05D007372 9.5e-85 318.5 553 49.2
Hma1.2p1_2307F.1_g319430 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 1.2e-84 318.2 580 50.5
CDE02G3804 Ceratophyllum demersum HOM05D005626 ORTHO05D007372 2.1e-84 317.4 482 42.1
MSTRG.27018 Avicennia marina HOM05D005626 ORTHO05D007372 2.8e-84 317.0 455 56.9
Lalb_Chr08g0240121 Lupinus albus HOM05D005626 ORTHO05D007372 1.8e-83 314.3 484 55.0
BcaB05g22007 Brassica carinata HOM05D005626 ORTHO05D007372 5.2e-83 312.8 448 57.1
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 2.0e-82 310.8 472 46.0
Oeu010695.1 Olea europaea HOM05D005626 ORTHO05D007372 3.4e-82 310.1 511 45.2
RcHm_v2.0_Chr1g0381501 Rosa chinensis HOM05D005626 ORTHO05D007372 9.9e-82 308.5 471 54.8
Sabra15G0008900 Salix brachista HOM05D005626 ORTHO05D007372 9.9e-82 308.5 512 45.5
BcaB05g22010 Brassica carinata HOM05D005626 ORTHO05D007372 4.9e-81 306.2 513 45.2
Cpa.g.sc3.101 Carica papaya HOM05D005626 ORTHO05D007372 6.4e-81 305.8 550 49.6
AT5G53080 Arabidopsis thaliana HOM05D005626 ORTHO05D007372 1.4e-80 304.7 486 52.7
Hma1.2p1_0591F.1_g185250 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 5.4e-80 302.8 537 51.6
MBI07_g43862_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 1.0e-78 298.5 476 40.3
Manes.06G011400 Manihot esculenta HOM05D005626 ORTHO05D007372 1.5e-77 294.7 453 45.7
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 9.5e-77 292.0 501 50.7
CSS0000100 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.6e-76 291.2 570 38.4
unitig_92.g28249 Utricularia gibba HOM05D005626 ORTHO05D007372 2.8e-76 290.4 489 41.7
Carub.0008s1328 Capsella rubella HOM05D005626 ORTHO05D007372 1.1e-75 288.5 501 49.9
Thhalv10013148m.g Eutrema salsugineum HOM05D005626 ORTHO05D007372 6.8e-75 285.8 588 46.9
Sed0007830 Sechium edule HOM05D005626 ORTHO05D007372 6.8e-75 285.8 600 44.8
Sp6g15250 Schrenkiella parvula HOM05D005626 ORTHO05D007372 2.0e-74 284.3 560 47.7
VMungo1309G2515 Vigna mungo HOM05D005626 ORTHO05D007372 2.0e-74 284.3 535 49.3
CARHR266100 Cardamine hirsuta HOM05D005626 ORTHO05D007372 5.8e-74 282.7 588 45.9
AL8G27710 Arabidopsis lyrata HOM05D005626 ORTHO05D007372 9.9e-74 282.0 561 46.3
CsaV3_5G000430 Cucumis sativus L. HOM05D005626 ORTHO05D007372 2.9e-73 280.4 597 39.0
SalBow4G1489 Salvia bowleyana HOM05D005626 ORTHO05D007372 2.9e-73 280.4 488 40.2
Lsat_1_v5_gn_9_49841 Lactuca sativa HOM05D005626 ORTHO05D007372 3.8e-73 280.0 548 48.0
Psat5g076080 Pisum sativum HOM05D005626 ORTHO05D007372 1.9e-72 277.7 596 45.6
ECA232G0910 Erigeron canadensis HOM05D005626 ORTHO05D007372 3.2e-72 276.9 496 50.4
A02p11310 Brassica napus HOM05D005626 ORTHO05D007372 7.1e-72 275.8 533 47.3
C02p18690 Brassica napus HOM05D005626 ORTHO05D007372 1.2e-71 275.0 484 50.4
Ca_16720_v3 Cicer arietinum L. HOM05D005626 ORTHO05D007372 2.7e-71 273.9 580 46.2
BolC2t08014H Brassica oleracea HOM05D005626 ORTHO05D007372 4.6e-71 273.1 483 50.3
arahy.Tifrunner.gnm1.ann1.1DU7LF Arachis hypogaea HOM05D005626 ORTHO05D007372 3.9e-70 270.0 613 34.3
BraA02t06193Z Brassica rapa HOM05D005626 ORTHO05D007372 3.9e-70 270.0 483 49.7
Glyma.04G234300 Glycine max HOM05D005626 ORTHO05D007372 1.1e-69 268.5 555 47.7
BcaC03g14458 Brassica carinata HOM05D005626 ORTHO05D007372 7.3e-69 265.8 547 47.0
Phvul.009G051300 Phaseolus vulgaris HOM05D005626 ORTHO05D007372 1.2e-68 265.0 578 45.8
PSO063G0511 Papaver somniferum HOM05D005626 ORTHO05D007372 1.1e-67 261.9 539 40.1
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 5.2e-67 259.6 434 54.1
ClCG01G000360 Citrullus lanatus HOM05D005626 ORTHO05D007372 6.9e-67 259.2 569 37.4
PSO170G4344 Papaver somniferum HOM05D005626 ORTHO05D007372 2.9e-65 253.8 591 37.6
Lj8A623T21 Lonicera japonica HOM05D005626 ORTHO05D007372 1.4e-64 251.5 499 41.5
HanXRQChr15g0485681 Helianthus annuus HOM05D005626 ORTHO05D007372 6.0e-63 246.1 553 44.3
Medtr3g091780 Medicago truncatula HOM05D005626 ORTHO05D007372 8.7e-62 242.3 577 43.7
MELO3C005892.2 Cucumis melo HOM05D005626 ORTHO05D007372 1.6e-60 238.0 489 39.1
FAN10G2571 Fragaria x ananassa HOM05D005626 ORTHO05D007372 4.8e-60 236.5 493 41.0
HPP92_005288 Vanilla planifolia HOM05D005626 ORTHO05D007372 1.4e-59 235.0 356 41.9
Gohir.A09G185000 Gossypium hirsutum HOM05D005626 ORTHO05D007372 7.6e-58 229.2 290 53.8
ATR0730G125 Amborella trichopoda HOM05D005626 ORTHO05D007372 9.9e-58 228.8 365 45.8
FAN10G0040 Fragaria x ananassa HOM05D005626 ORTHO05D009683 1.5e-53 214.9 423 39.5
DCAR_010593 Daucus carota HOM05D005626 ORTHO05D007372 1.4e-48 198.4 227 49.8
Lj1A1021T49 Lonicera japonica HOM05D005626 ORTHO05D007372 4.3e-45 186.8 376 43.6
PGSC0003DMG400018528 Solanum tuberosum HOM05D005626 ORTHO05D007372 5.3e-43 179.9 211 51.2
Manes.06G012101 Manihot esculenta HOM05D005626 ORTHO05D007372 4.6e-39 166.8 324 39.8
Manes.06G011750 Manihot esculenta HOM05D005626 ORTHO05D007372 4.3e-37 160.2 182 57.1
Mapoly0045s0029 Marchantia polymorpha HOM05D005626 ORTHO05D007372 1.7e-33 148.3 342 37.7
MBI19_g14786_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 5.1e-30 136.7 173 44.5
Pp3c5_16230 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.1e-29 135.6 335 29.9
MBI19_g14787_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 1.5e-29 135.2 96 64.6
Mapoly0001s0084 Marchantia polymorpha HOM05D005626 ORTHO05D007372 9.1e-27 125.9 458 24.7
Pp3c16_9300 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.0e-25 122.5 327 28.1
Lj1C1019T10 Lonicera japonica HOM05D005626 ORTHO05D007372 9.7e-21 105.9 83 68.7
BcaB01g04214 Brassica carinata HOM05D005626 ORTHO05D007372 1.3e-20 105.5 141 44.7
CSS0006573 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.3e-20 105.5 84 64.3
BcaB01g04215 Brassica carinata HOM05D005626 ORTHO05D007372 3.7e-20 104.0 139 43.2
Glyma.06G130333 Glycine max HOM05D005626 ORTHO05D007372 3.7e-20 104.0 133 42.9
SEGI_36936 Sequoiadendron giganteum HOM05D005626 ORTHO05D007372 4.5e-18 97.1 150 34.7
MD07G1293400 Malus domestica HOM05D005626 ORTHO05D007372 8.5e-17 92.8 101 55.4
Pp3c5_16240 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.2e-15 89.0 321 33.6
Actinidia06140 Actinidia chinensis HOM05D005626 ORTHO05D007372 8.2e-12 76.3 69 56.5
Glyma.06G130267 Glycine max HOM05D005626 ORTHO05D007372 7.0e-11 73.2 114 43.0
Lj1A1021T50 Lonicera japonica HOM05D005626 ORTHO05D007372 9.1e-11 72.8 165 33.9
Pp3c23_14930 Physcomitrium patens HOM05D005626 ORTHO05D007372 4.5e-10 70.5 152 30.3
QL09p008114 Quercus lobata HOM05D005626 ORTHO05D007372 4.5e-10 70.5 52 63.5
AagrBONN_evm.TU.Sc2ySwM_369.443 Anthoceros agrestis HOM05D005626 ORTHO05D007372 8.5e-09 66.2 156 30.1
Pp3c8_12740 Physcomitrium patens HOM05D005626 ORTHO05D007372 5.5e-08 63.5 152 27.6
Cfa019813 Carpinus fangiana HOM05D005626 ORTHO05D007372 7.2e-08 63.2 47 61.7
Lj1C1019T11 Lonicera japonica HOM05D005626 ORTHO05D007372 2.7e-07 61.2 129 33.3


User provided reference genes

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