Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028254 Chenopodium quinoa HOM05D007027 ORTHO05D008765 8.5e-102 373.6 182 100.0
AUR62043952 Chenopodium quinoa HOM05D007027 ORTHO05D008765 4.1e-96 354.8 182 94.0
EL10Ac6g14111 Beta vulgaris HOM05D007027 ORTHO05D008765 5.4e-72 274.6 191 72.8
CiPaw.05G004800 Carya illinoinensis HOM05D007027 ORTHO05D008765 5.5e-69 264.6 197 69.0
Hund15459 Selenicereus undatus HOM05D007027 ORTHO05D008765 1.6e-68 263.1 182 73.1
Duzib132G0056 Durio zibethinus HOM05D007027 ORTHO05D008765 6.1e-68 261.2 196 66.8
Cpa.g.sc113.45 Carica papaya HOM05D007027 ORTHO05D008765 2.3e-67 259.2 198 67.2
MD15G1435400 Malus domestica HOM05D007027 ORTHO05D008765 3.0e-67 258.8 186 70.4
MD08G1241400 Malus domestica HOM05D007027 ORTHO05D008765 4.0e-67 258.5 186 71.0
Prupe.1G579000 Prunus persica HOM05D007027 ORTHO05D008765 5.2e-67 258.1 186 69.9
Gohir.D01G174800 Gossypium hirsutum HOM05D007027 ORTHO05D008765 8.8e-67 257.3 202 64.9
Haze_10044 Corylus avellana HOM05D007027 ORTHO05D008765 3.4e-66 255.4 197 65.5
Gohir.A01G183800 Gossypium hirsutum HOM05D007027 ORTHO05D008765 4.4e-66 255.0 199 65.8
Gorai.002G216900 Gossypium raimondii HOM05D007027 ORTHO05D008765 4.4e-66 255.0 202 64.9
Dinv07482 Davidia involucrata HOM05D007027 ORTHO05D008765 9.8e-66 253.8 198 64.6
QL02p100436 Quercus lobata HOM05D007027 ORTHO05D008765 1.3e-65 253.4 202 68.3
FvH4_3g33250 Fragaria vesca HOM05D007027 ORTHO05D008765 1.7e-65 253.1 185 67.6
CSS0028981 Camellia sinensis var. sinensis HOM05D007027 ORTHO05D008765 2.8e-65 252.3 198 65.2
CANSAT54G3047 Cannabis sativa HOM05D007027 ORTHO05D008765 2.8e-65 252.3 179 70.4
CiPaw.06G173600 Carya illinoinensis HOM05D007027 ORTHO05D008765 3.7e-65 251.9 194 66.5
Glyma.16G003100 Glycine max HOM05D007027 ORTHO05D008765 6.3e-65 251.1 195 66.2
MELO3C011820.2 Cucumis melo HOM05D007027 ORTHO05D008765 1.4e-64 250.0 180 68.9
TAR381G1092 Trochodendron aralioides HOM05D007027 ORTHO05D008765 1.8e-64 249.6 181 69.6
Cfa004487 Carpinus fangiana HOM05D007027 ORTHO05D008765 2.4e-64 249.2 197 65.5
Lalb_Chr20g0123691 Lupinus albus HOM05D007027 ORTHO05D008765 2.4e-64 249.2 197 65.5
Potri.003G008500 Populus trichocarpa HOM05D007027 ORTHO05D008765 3.1e-64 248.8 203 65.5
FAN25G1584 Fragaria x ananassa HOM05D007027 ORTHO05D008765 4.1e-64 248.4 185 66.5
RcHm_v2.0_Chr5g0060601 Rosa chinensis HOM05D007027 ORTHO05D008765 5.4e-64 248.1 186 65.6
GSVIVG01023249001 Vitis vinifera HOM05D007027 ORTHO05D008765 7.0e-64 247.7 195 64.6
Glyma.12G167000 Glycine max HOM05D007027 ORTHO05D008765 1.2e-63 246.9 195 67.7
Manes.07G024000 Manihot esculenta HOM05D007027 ORTHO05D008765 1.2e-63 246.9 195 66.2
THA.LOC104816809 Tarenaya hassleriana HOM05D007027 ORTHO05D008765 1.2e-63 246.9 187 63.1
Nitab4.5_0000787g0210 Nicotiana tabacum HOM05D007027 ORTHO05D008765 1.6e-63 246.5 197 64.0
SalBow7G1849 Salvia bowleyana HOM05D007027 ORTHO05D008765 1.6e-63 246.5 197 64.0
Ca_00043_v3 Cicer arietinum L. HOM05D007027 ORTHO05D008765 2.0e-63 246.1 195 65.1
Nitab4.5_0004106g0030 Nicotiana tabacum HOM05D007027 ORTHO05D008765 2.7e-63 245.7 197 64.5
FAN16G3401 Fragaria x ananassa HOM05D007027 ORTHO05D008765 3.5e-63 245.4 185 65.4
PGSC0003DMG400024892 Solanum tuberosum HOM05D007027 ORTHO05D008765 3.5e-63 245.4 197 64.0
VMungo0540G1081 Vigna mungo HOM05D007027 ORTHO05D008765 3.5e-63 245.4 195 64.6
PGR142G1179 Punica granatum HOM05D007027 ORTHO05D008765 4.5e-63 245.0 193 64.2
Rhsim11G0122600 Rhododendron simsii HOM05D007027 ORTHO05D008765 4.5e-63 245.0 199 65.3
CAN.G855.3 Capsicum annuum HOM05D007027 ORTHO05D008765 5.9e-63 244.6 197 62.9
Nn5g27423 Nelumbo nucifera HOM05D007027 ORTHO05D008765 5.9e-63 244.6 191 64.9
Medtr2g005830 Medicago truncatula HOM05D007027 ORTHO05D008765 7.7e-63 244.2 196 66.8
BcaC05g24848 Brassica carinata HOM05D007027 ORTHO05D008765 1.0e-62 243.8 186 65.6
HanXRQChr09g0249131 Helianthus annuus HOM05D007027 ORTHO05D008765 1.7e-62 243.0 187 66.3
ATR1136G089 Amborella trichopoda HOM05D007027 ORTHO05D008765 2.3e-62 242.7 187 64.2
CsaV3_5G029790 Cucumis sativus L. HOM05D007027 ORTHO05D008765 2.3e-62 242.7 181 68.0
DCAR_006671 Daucus carota HOM05D007027 ORTHO05D008765 2.9e-62 242.3 195 62.6
TPR.G2122 Trifolium pratense HOM05D007027 ORTHO05D008765 3.8e-62 241.9 195 64.1
Thhalv10007981m.g Eutrema salsugineum HOM05D007027 ORTHO05D008765 1.1e-61 240.4 187 64.2
Lj6g0019688 Lotus japonicus HOM05D007027 ORTHO05D008765 1.5e-61 240.0 187 66.3
Lj6g0023928 Lotus japonicus HOM05D007027 ORTHO05D008765 1.5e-61 240.0 187 66.3
Psat1g222360 Pisum sativum HOM05D007027 ORTHO05D008765 1.9e-61 239.6 196 64.8
Solyc01g103560.3 Solanum lycopersicum HOM05D007027 ORTHO05D008765 2.5e-61 239.2 197 62.4
Sopen01g045910 Solanum pennellii HOM05D007027 ORTHO05D008765 3.3e-61 238.8 197 62.4
arahy.Tifrunner.gnm1.ann1.BAUB6M Arachis hypogaea HOM05D007027 ORTHO05D008765 4.3e-61 238.4 194 63.9
CARHR009790 Cardamine hirsuta HOM05D007027 ORTHO05D008765 4.3e-61 238.4 195 62.1
Cc02_g23170 Coffea canephora HOM05D007027 ORTHO05D008765 4.3e-61 238.4 192 65.1
Migut.B00775 Erythranthe guttata HOM05D007027 ORTHO05D008765 5.6e-61 238.0 188 63.3
Sabra03G0004200 Salix brachista HOM05D007027 ORTHO05D008765 5.6e-61 238.0 197 63.5
arahy.Tifrunner.gnm1.ann1.3G44QY Arachis hypogaea HOM05D007027 ORTHO05D008765 1.2e-60 236.9 194 63.4
Sp1g08410 Schrenkiella parvula HOM05D007027 ORTHO05D008765 2.1e-60 236.1 197 60.9
Aqoxy3G00475 Aquilegia oxysepala HOM05D007027 ORTHO05D008765 2.8e-60 235.7 199 62.8
Atru.chr6.497 Acer truncatum HOM05D007027 ORTHO05D008765 4.7e-60 235.0 189 64.0
FAN11G0675 Fragaria x ananassa HOM05D007027 ORTHO05D008765 4.7e-60 235.0 221 56.6
MBI03_g18680_MAGBIO Magnolia biondii HOM05D007027 ORTHO05D008765 6.1e-60 234.6 215 57.7
SGA_v2.0_scaffold304G47919 Striga asiatica HOM05D007027 ORTHO05D008765 2.3e-59 232.6 205 61.0
A09p65310 Brassica napus HOM05D007027 ORTHO05D008765 3.0e-59 232.3 187 60.4
AT1G09800 Arabidopsis thaliana HOM05D007027 ORTHO05D008765 6.8e-59 231.1 195 61.0
C08p49260 Brassica napus HOM05D007027 ORTHO05D008765 1.5e-58 229.9 187 60.4
Oeu064602.3 Olea europaea HOM05D007027 ORTHO05D008765 1.5e-58 229.9 236 54.7
vmacro01711 Vaccinium macrocarpon HOM05D007027 ORTHO05D008765 2.6e-58 229.2 234 56.0
BolC8t52461H Brassica oleracea HOM05D007027 ORTHO05D008765 3.4e-58 228.8 187 59.9
BcaC07g41859 Brassica carinata HOM05D007027 ORTHO05D008765 7.5e-58 227.6 193 61.1
ECA233G3768 Erigeron canadensis HOM05D007027 ORTHO05D008765 9.8e-58 227.3 179 64.8
Lj5C266T4 Lonicera japonica HOM05D007027 ORTHO05D008765 9.8e-58 227.3 179 66.5
Carub.0001s0916 Capsella rubella HOM05D007027 ORTHO05D008765 1.3e-57 226.9 195 61.0
Actinidia00176 Actinidia chinensis HOM05D007027 ORTHO05D008765 6.4e-57 224.6 187 63.6
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 8.3e-57 224.2 179 63.7
PSO170G1275 Papaver somniferum HOM05D007027 ORTHO05D008765 1.4e-56 223.4 197 59.9
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 3.2e-56 222.2 178 61.2
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 5.4e-56 221.5 178 61.2
PSO017G0894 Papaver somniferum HOM05D007027 ORTHO05D008765 5.4e-56 221.5 197 59.4
unitig_699.g19848 Utricularia gibba HOM05D007027 ORTHO05D008765 5.4e-56 221.5 187 59.9
Ciclev10001491m.g Citrus clementina HOM05D007027 ORTHO05D008765 9.2e-56 220.7 183 63.9
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 2.0e-55 219.5 177 63.3
Os12g0194800 Oryza sativa ssp. japonica HOM05D007027 ORTHO05D008765 3.5e-55 218.8 198 56.1
Zm00001eb138750 Zea mays HOM05D007027 ORTHO05D008765 3.0e-54 215.7 199 55.8
Thecc.02G018500 Theobroma cacao HOM05D007027 ORTHO05D008765 3.9e-54 215.3 179 64.2
AL1G20380 Arabidopsis lyrata HOM05D007027 ORTHO05D008765 6.6e-54 214.5 232 51.3
Pp3c1_13020 Physcomitrium patens HOM05D007027 ORTHO05D008765 1.1e-53 213.8 187 58.3
HPP92_013442 Vanilla planifolia HOM05D007027 ORTHO05D008765 1.0e-51 207.2 183 59.6
COL.COLO4_17723 Corchorus olitorius HOM05D007027 ORTHO05D008765 1.1e-48 197.2 197 55.3
TWI23G0132 Tripterygium wilfordii HOM05D007027 ORTHO05D008765 4.1e-48 195.3 201 56.2
FAN21G1550 Fragaria x ananassa HOM05D007027 ORTHO05D008765 7.0e-48 194.5 185 56.2
Peaxi162Scf00011g01224 Petunia axillaris HOM05D007027 ORTHO05D008765 1.9e-45 186.4 222 49.5
Mapoly0016s0042 Marchantia polymorpha HOM05D007027 ORTHO05D008765 5.6e-45 184.9 190 51.1
SMO118G0354 Selaginella moellendorffii HOM05D007027 ORTHO05D008765 2.2e-41 172.9 179 53.1
Eucgr.I02764 Eucalyptus grandis HOM05D007027 ORTHO05D008765 1.4e-40 170.2 130 66.2
Sc07g0005100 Simmondsia chinensis HOM05D007027 ORTHO05D008765 1.4e-40 170.2 134 63.4
Sed0027668 Sechium edule HOM05D007027 ORTHO05D008765 3.9e-38 162.2 130 60.8
ClCG11G013270 Citrullus lanatus HOM05D007027 ORTHO05D008765 7.3e-37 157.9 179 50.8
CDE05G0566 Ceratophyllum demersum HOM05D007027 ORTHO05D008765 1.4e-32 143.7 136 55.9
Phvul.006G218900 Phaseolus vulgaris HOM05D007027 ORTHO05D008765 8.6e-30 134.4 83 75.9
CBR_g30061 Chara braunii HOM05D007027 ORTHO05D008765 3.3e-29 132.5 327 32.4
MCO02G420 Micromonas commoda HOM05D007027 ORTHO05D008765 1.1e-21 107.5 230 34.3
HPP92_013441 Vanilla planifolia HOM05D007027 ORTHO05D008765 4.6e-15 85.5 54 66.7
SEGI_30443 Sequoiadendron giganteum HOM05D007027 ORTHO05D008765 3.6e-12 75.9 53 69.8
Pp3c21_5420 Physcomitrium patens HOM05D006708 ORTHO05D008321 6.0e-07 58.5 171 27.5
AagrBONN_evm.TU.Sc2ySwM_228.1603 Anthoceros agrestis HOM05D006708 ORTHO05D008321 1.3e-06 57.4 173 28.9
Mapoly0209s0002 Marchantia polymorpha HOM05D006708 ORTHO05D008321 5.1e-06 55.5 171 26.3
Aa31LG1G5150 Aethionema arabicum HOM05D007027 ORTHO05D008765 6.7e-06 55.1 41 58.5


User provided reference genes

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