Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62018003 Chenopodium quinoa HOM05D005334 ORTHO05D006560 1.3e-227 792.7 394 100.0
AUR62003692 Chenopodium quinoa HOM05D005334 ORTHO05D006560 3.6e-198 694.9 394 88.8
Ah.02g123390 Amaranthus hybridus HOM05D005334 ORTHO05D006560 4.3e-151 538.5 394 70.3
Sc03g0000510 Simmondsia chinensis HOM05D005334 ORTHO05D006560 1.5e-148 530.0 390 70.5
Hma1.2p1_0964F.1_g242010 Hydrangea macrophylla HOM05D005334 ORTHO05D006560 3.8e-139 498.8 406 65.0
Potri.010G189500 Populus trichocarpa HOM05D005334 ORTHO05D006560 3.2e-138 495.7 391 64.7
Gorai.008G084700 Gossypium raimondii HOM05D005334 ORTHO05D006560 4.6e-137 491.9 388 66.2
FvH4_7g07230 Fragaria vesca HOM05D005334 ORTHO05D006560 1.8e-136 490.0 390 63.8
Cfa006855 Carpinus fangiana HOM05D005334 ORTHO05D006560 3.0e-136 489.2 392 64.3
FAN26G1496 Fragaria x ananassa HOM05D005334 ORTHO05D006560 3.0e-136 489.2 390 63.6
Eucgr.A00094 Eucalyptus grandis HOM05D005334 ORTHO05D006560 5.6e-135 485.0 392 63.5
Gohir.D12G076300 Gossypium hirsutum HOM05D005334 ORTHO05D006560 5.6e-135 485.0 389 66.1
MD01G1042400 Malus domestica HOM05D005334 ORTHO05D006560 5.6e-135 485.0 392 63.5
Nitab4.5_0000402g0140 Nicotiana tabacum HOM05D005334 ORTHO05D006560 7.4e-135 484.6 391 62.9
Peaxi162Scf00085g00115 Petunia axillaris HOM05D005334 ORTHO05D006560 7.4e-135 484.6 395 63.5
Prupe.1G076500 Prunus persica HOM05D005334 ORTHO05D006560 7.4e-135 484.6 392 63.0
Ciclev10008278m.g Citrus clementina HOM05D005334 ORTHO05D006560 1.3e-134 483.8 395 64.1
Haze_03908 Corylus avellana HOM05D005334 ORTHO05D006560 1.3e-134 483.8 387 64.6
CsaV3_6G044840 Cucumis sativus L. HOM05D005334 ORTHO05D006560 1.6e-134 483.4 390 62.6
RcHm_v2.0_Chr6g0270301 Rosa chinensis HOM05D005334 ORTHO05D006560 1.6e-134 483.4 390 63.6
RcHm_v2.0_Chr6g0270401 Rosa chinensis HOM05D005334 ORTHO05D006560 1.6e-134 483.4 390 63.1
Sabra10G0146100 Salix brachista HOM05D005334 ORTHO05D006560 2.8e-134 482.6 412 60.9
Sopen11g005690 Solanum pennellii HOM05D005334 ORTHO05D006560 2.8e-134 482.6 391 62.9
ClCG01G018260 Citrullus lanatus HOM05D005334 ORTHO05D006560 3.7e-134 482.3 390 63.1
Hund14075 Selenicereus undatus HOM05D005334 ORTHO05D006560 3.7e-134 482.3 394 64.7
FAN23G0783 Fragaria x ananassa HOM05D005334 ORTHO05D006560 4.8e-134 481.9 390 63.1
QL06p036434 Quercus lobata HOM05D005334 ORTHO05D006560 4.8e-134 481.9 391 64.2
Thecc.10G018300 Theobroma cacao HOM05D005334 ORTHO05D006560 6.2e-134 481.5 390 64.9
FAN23G0357 Fragaria x ananassa HOM05D005334 ORTHO05D006560 8.2e-134 481.1 394 62.7
CAN.G1813.2 Capsicum annuum HOM05D005334 ORTHO05D006560 1.1e-133 480.7 391 63.2
Cc07_g13790 Coffea canephora HOM05D005334 ORTHO05D006560 1.4e-133 480.3 395 63.0
TWI34G1275 Tripterygium wilfordii HOM05D005334 ORTHO05D006560 1.8e-133 479.9 396 63.9
FvH4_1g19290 Fragaria vesca HOM05D005334 ORTHO05D006560 3.1e-133 479.2 390 62.8
Solyc11g010950.2 Solanum lycopersicum HOM05D005334 ORTHO05D006560 5.3e-133 478.4 391 62.4
CANSAT01G0836 Cannabis sativa HOM05D005334 ORTHO05D006560 6.9e-133 478.0 390 63.8
Duzib128G0185 Durio zibethinus HOM05D005334 ORTHO05D006560 1.2e-132 477.2 400 64.2
Rhsim04G0113300 Rhododendron simsii HOM05D005334 ORTHO05D006560 1.2e-132 477.2 391 63.7
CiPaw.07G045200 Carya illinoinensis HOM05D005334 ORTHO05D006560 2.0e-132 476.5 399 63.4
Sed0026061 Sechium edule HOM05D005334 ORTHO05D006560 3.4e-132 475.7 394 62.2
Actinidia05483 Actinidia chinensis HOM05D005334 ORTHO05D006560 5.8e-132 474.9 395 62.5
MELO3C007703.2 Cucumis melo HOM05D005334 ORTHO05D006560 5.8e-132 474.9 390 61.3
PGSC0003DMG400016186 Solanum tuberosum HOM05D005334 ORTHO05D006560 5.8e-132 474.9 391 62.1
SGA_v2.0_scaffold45G17221 Striga asiatica HOM05D005334 ORTHO05D006560 7.6e-132 474.6 391 63.9
GSVIVG01003946001 Vitis vinifera HOM05D005334 ORTHO05D006560 1.3e-131 473.8 392 63.3
Manes.10G013400 Manihot esculenta HOM05D005334 ORTHO05D006560 8.4e-131 471.1 391 63.9
ECA233G4415 Erigeron canadensis HOM05D005334 ORTHO05D006560 1.1e-130 470.7 394 62.4
Ciclev10008715m.g Citrus clementina HOM05D005334 ORTHO05D006560 3.2e-130 469.2 395 63.0
vmacro09003 Vaccinium macrocarpon HOM05D005334 ORTHO05D006560 5.5e-130 468.4 391 62.4
Lj3g0001207 Lotus japonicus HOM05D005334 ORTHO05D006560 2.3e-128 463.0 391 62.9
MSTRG.3723 Avicennia marina HOM05D005334 ORTHO05D006560 1.1e-127 460.7 393 60.3
PSO700G0130 Papaver somniferum HOM05D005334 ORTHO05D006560 1.1e-127 460.7 391 60.6
Ca_14799_v3 Cicer arietinum L. HOM05D005334 ORTHO05D006560 1.9e-127 459.9 392 62.0
TAR625G0036 Trochodendron aralioides HOM05D005334 ORTHO05D006560 1.9e-127 459.9 390 62.3
CiPaw.07G045000 Carya illinoinensis HOM05D005334 ORTHO05D006560 1.6e-126 456.8 395 62.5
PSO832G1169 Papaver somniferum HOM05D005334 ORTHO05D006560 1.6e-126 456.8 390 60.8
Glyma.13G008300 Glycine max HOM05D005334 ORTHO05D006560 2.8e-126 456.1 391 61.9
HanXRQChr08g0226671 Helianthus annuus HOM05D005334 ORTHO05D006560 3.7e-126 455.7 391 60.6
Nn5g29815 Nelumbo nucifera HOM05D005334 ORTHO05D006560 3.7e-126 455.7 390 61.5
SalBow5G3116 Salvia bowleyana HOM05D005334 ORTHO05D006560 2.4e-125 453.0 392 59.9
Phvul.010G046100 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 5.3e-125 451.8 392 61.2
PSO761G0425 Papaver somniferum HOM05D005334 ORTHO05D006560 9.0e-125 451.1 392 60.2
Medtr8g007340 Medicago truncatula HOM05D005334 ORTHO05D006560 2.0e-124 449.9 391 61.4
SalBow5G4670 Salvia bowleyana HOM05D005334 ORTHO05D006560 2.0e-124 449.9 392 59.7
Phvul.010G045900 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 5.9e-124 448.4 392 60.7
arahy.Tifrunner.gnm1.ann1.DY9T0P Arachis hypogaea HOM05D005334 ORTHO05D006560 7.6e-124 448.0 392 60.7
Aqoxy6G01573 Aquilegia oxysepala HOM05D005334 ORTHO05D006560 2.9e-123 446.0 386 62.2
arahy.Tifrunner.gnm1.ann1.D5QNLH Arachis hypogaea HOM05D005334 ORTHO05D006560 2.9e-123 446.0 392 60.7
Migut.K00814 Erythranthe guttata HOM05D005334 ORTHO05D006560 2.9e-123 446.0 396 60.9
Psat4g223080 Pisum sativum HOM05D005334 ORTHO05D006560 5.0e-123 445.3 392 60.7
PGR031G2068 Punica granatum HOM05D005334 ORTHO05D006560 1.6e-121 440.3 396 58.8
Lalb_Chr12g0210501 Lupinus albus HOM05D005334 ORTHO05D006560 2.3e-120 436.4 388 60.8
VMungo0331G1245 Vigna mungo HOM05D005334 ORTHO05D006560 5.1e-120 435.3 392 59.4
CSS0002721 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 1.5e-119 433.7 353 62.9
FAN19G2596 Fragaria x ananassa HOM05D005334 ORTHO05D006560 1.5e-119 433.7 393 58.5
Lj2C525G9 Lonicera japonica HOM05D005334 ORTHO05D006560 1.4e-117 427.2 392 61.0
COL.COLO4_25710 Corchorus olitorius HOM05D005334 ORTHO05D006560 2.4e-117 426.4 337 65.0
Thhalv10021017m.g Eutrema salsugineum HOM05D005334 ORTHO05D006560 9.1e-117 424.5 390 58.5
Carub.0003s1053 Capsella rubella HOM05D005334 ORTHO05D006560 3.4e-116 422.5 396 58.6
Sp3g09500 Schrenkiella parvula HOM05D005334 ORTHO05D006560 7.7e-116 421.4 387 58.4
BcaC05g29390 Brassica carinata HOM05D005334 ORTHO05D006560 1.7e-115 420.2 388 59.3
CiPaw.07G049700 Carya illinoinensis HOM05D005334 ORTHO05D006560 2.2e-115 419.9 399 58.4
Aa31LG3G4530 Aethionema arabicum HOM05D005334 ORTHO05D006560 6.5e-115 418.3 387 59.2
CARHR085780 Cardamine hirsuta HOM05D005334 ORTHO05D006560 6.5e-115 418.3 387 58.7
Os06g0639600 Oryza sativa ssp. japonica HOM05D005334 ORTHO05D006560 6.5e-115 418.3 396 57.1
A05p38080 Brassica napus HOM05D005334 ORTHO05D006560 8.5e-115 417.9 389 58.9
AT3G11220 Arabidopsis thaliana HOM05D005334 ORTHO05D006560 1.1e-114 417.5 386 59.1
Cpa.g.sc19.179 Carica papaya HOM05D005334 ORTHO05D006560 1.4e-114 417.2 390 58.2
C05p56870 Brassica napus HOM05D005334 ORTHO05D006560 4.2e-114 415.6 389 59.1
THA.LOC104816551 Tarenaya hassleriana HOM05D005334 ORTHO05D006560 7.2e-114 414.8 387 56.8
BraA05t22600Z Brassica rapa HOM05D005334 ORTHO05D006560 1.2e-113 414.1 389 58.6
Atru.chr12.1050 Acer truncatum HOM05D005334 ORTHO05D006560 1.6e-113 413.7 337 63.5
AL3G22740 Arabidopsis lyrata HOM05D005334 ORTHO05D006560 1.5e-111 407.1 402 57.0
BolC5t34351H Brassica oleracea HOM05D005334 ORTHO05D006560 2.0e-111 406.8 414 55.6
CiPaw.07G044700 Carya illinoinensis HOM05D005334 ORTHO05D006560 7.4e-111 404.8 397 55.7
unitig_0.g2648 Utricularia gibba HOM05D005334 ORTHO05D006560 1.7e-110 403.7 404 55.2
PSO013G0112 Papaver somniferum HOM05D005334 ORTHO05D006560 9.1e-109 397.9 349 59.9
Lsat_1_v5_gn_6_15620 Lactuca sativa HOM05D005334 ORTHO05D006560 2.0e-108 396.7 390 56.9
CDE04G2384 Ceratophyllum demersum HOM05D005334 ORTHO05D006560 1.4e-106 390.6 397 53.7
MBI10_g34777_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 2.7e-105 386.3 340 58.8
Zm00001eb387250 Zea mays HOM05D005334 ORTHO05D006560 8.0e-105 384.8 397 53.4
Dinv36960 Davidia involucrata HOM05D005334 ORTHO05D006560 5.2e-104 382.1 276 69.2
SEGI_17743 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 6.1e-97 358.6 414 48.1
Glyma.03G108600 Glycine max HOM05D005334 ORTHO05D006560 4.0e-96 355.9 329 58.4
SHI03443 Sapria himalayana HOM05D005334 ORTHO05D006560 1.5e-95 354.0 384 52.1
FAN03G2380 Fragaria x ananassa HOM05D005334 ORTHO05D006560 3.7e-94 349.4 404 50.0
ATR1153G009 Amborella trichopoda HOM05D005334 ORTHO05D006560 1.8e-85 320.5 338 51.5
Gohir.A12G078265 Gossypium hirsutum HOM05D005334 ORTHO05D006560 6.5e-83 312.0 274 62.8
Mapoly0006s0234 Marchantia polymorpha HOM05D005334 ORTHO05D006560 2.4e-77 293.5 416 42.8
Pp3c9_23940 Physcomitrium patens HOM05D005334 ORTHO05D006560 2.4e-77 293.5 398 44.0
AagrBONN_evm.TU.Sc2ySwM_117.1770 Anthoceros agrestis HOM05D005334 ORTHO05D006560 1.6e-73 280.8 426 40.8
Thecc.09G278800 Theobroma cacao HOM05D005334 ORTHO05D006560 6.0e-68 262.3 273 53.1
Prupe.6G206700 Prunus persica HOM05D005334 ORTHO05D006560 5.0e-67 259.2 392 43.6
Dinv27014 Davidia involucrata HOM05D005334 ORTHO05D006560 6.6e-67 258.8 204 63.7
DCAR_003438 Daucus carota HOM05D005334 ORTHO05D006560 7.3e-66 255.4 333 45.3
Lsat_1_v5_gn_8_12861 Lactuca sativa HOM05D005334 ORTHO05D006560 3.9e-59 233.0 158 72.8
Lsat_1_v5_gn_4_105120 Lactuca sativa HOM05D005334 ORTHO05D006560 8.6e-59 231.9 210 59.5
TPR.G11130 Trifolium pratense HOM05D005334 ORTHO05D006560 4.7e-57 226.1 193 62.2
TPR.G5292 Trifolium pratense HOM05D005334 ORTHO05D006560 6.2e-57 225.7 203 57.6
Lj6g0009802 Lotus japonicus HOM05D005334 ORTHO05D006560 1.8e-56 224.2 195 63.1
Lj2g0000099 Lotus japonicus HOM05D005334 ORTHO05D006560 3.1e-56 223.4 197 58.9
BcaB06g25638 Brassica carinata HOM05D005334 ORTHO05D006560 6.2e-49 199.1 198 55.6
CiPaw.07G044400 Carya illinoinensis HOM05D005334 ORTHO05D006560 4.9e-46 189.5 142 70.4
Lsat_1_v5_gn_5_29040 Lactuca sativa HOM05D005334 ORTHO05D006560 2.3e-43 180.6 192 53.1
Lsat_1_v5_gn_4_67481 Lactuca sativa HOM05D005334 ORTHO05D006560 6.6e-43 179.1 142 66.9
CSS0046374 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 8.7e-43 178.7 152 61.8
CSS0016906 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 2.1e-41 174.1 152 60.5
SMO146G0066 Selaginella moellendorffii HOM05D005334 ORTHO05D006560 1.2e-36 158.3 217 43.3
RcHm_v2.0_Chr2g0110581 Rosa chinensis HOM05D005334 ORTHO05D006560 1.5e-34 151.4 334 32.6
Lsat_1_v5_gn_1_79261 Lactuca sativa HOM05D005334 ORTHO05D006560 3.3e-34 150.2 142 58.5
MD01G1042700 Malus domestica HOM05D005334 ORTHO05D006560 1.6e-33 147.9 193 43.5
SEGI_40300 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 2.4e-32 144.1 182 42.3
CSS0017464 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 4.0e-32 143.3 152 53.9
ATR0022G031 Amborella trichopoda HOM05D005334 ORTHO05D006560 1.4e-29 134.8 171 47.4
HPP92_008022 Vanilla planifolia HOM05D005334 ORTHO05D006560 1.1e-26 125.2 114 57.9
HPP92_008021 Vanilla planifolia HOM05D005334 ORTHO05D006560 4.5e-23 113.2 71 77.5
MBI03_g45376_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 1.8e-19 101.3 114 50.0
CSS0026696 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 3.9e-19 100.1 102 52.9
Cre03.g196000 Chlamydomonas reinhardtii HOM05D005334 ORTHO05D006560 9.0e-16 89.0 182 30.2
MBI03_g46739_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 2.6e-15 87.4 107 45.8
CBR_g30786 Chara braunii HOM05D000019 ORTHO05D000002 3.1e-08 63.9 213 27.7
MCO12G220 Micromonas commoda HOM05D005334 ORTHO05D006560 2.2e-06 57.8 149 30.9


User provided reference genes

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