Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62006798 Chenopodium quinoa HOM05D005824 ORTHO05D007029 0.0e+00 1444.9 748 100.0
AUR62000450 Chenopodium quinoa HOM05D005824 ORTHO05D007029 0.0e+00 1380.5 756 95.2
EL10Ac4g09532 Beta vulgaris HOM05D005824 ORTHO05D007029 3.1e-283 978.4 746 72.1
Ah.10g027060 Amaranthus hybridus HOM05D005824 ORTHO05D007029 7.2e-240 834.3 770 61.7
Hund21844 Selenicereus undatus HOM05D005824 ORTHO05D007029 4.7e-223 778.5 801 55.6
GSVIVG01031305001 Vitis vinifera HOM05D005824 ORTHO05D007029 3.3e-184 649.4 754 50.7
Sc09g0002470 Simmondsia chinensis HOM05D005824 ORTHO05D007029 9.6e-184 647.9 760 51.7
Sabra15G0009000 Salix brachista HOM05D005824 ORTHO05D007029 1.7e-180 637.1 760 49.1
CSS0029355 Camellia sinensis var. sinensis HOM05D005824 ORTHO05D007029 2.2e-180 636.7 752 48.8
Potri.015G010900 Populus trichocarpa HOM05D005824 ORTHO05D007029 1.9e-179 633.6 771 48.5
CiPaw.10G020000 Carya illinoinensis HOM05D005824 ORTHO05D007029 1.3e-177 627.5 759 49.0
Cc02_g35570 Coffea canephora HOM05D005824 ORTHO05D007029 8.7e-177 624.8 779 48.4
Rhsim11G0099700 Rhododendron simsii HOM05D005824 ORTHO05D007029 1.9e-176 623.6 750 48.0
Dinv24497 Davidia involucrata HOM05D005824 ORTHO05D007029 4.3e-176 622.5 751 48.3
QL07p026733 Quercus lobata HOM05D005824 ORTHO05D007029 3.6e-175 619.4 767 48.6
VMungo0720G2244 Vigna mungo HOM05D005824 ORTHO05D007029 3.6e-175 619.4 756 48.9
Oeu061927.1 Olea europaea HOM05D005824 ORTHO05D007029 2.0e-173 613.6 796 47.4
Sopen01g044470 Solanum pennellii HOM05D005824 ORTHO05D007029 4.5e-173 612.5 768 49.2
arahy.Tifrunner.gnm1.ann1.S86EGP Arachis hypogaea HOM05D005824 ORTHO05D007029 2.2e-172 610.1 765 47.5
TPR.G21237 Trifolium pratense HOM05D005824 ORTHO05D007029 1.4e-171 607.4 811 46.0
TPR.G12910 Trifolium pratense HOM05D005824 ORTHO05D007029 4.2e-171 605.9 753 48.1
Ca_11665_v3 Cicer arietinum L. HOM05D005824 ORTHO05D007029 9.3e-171 604.7 777 47.0
arahy.Tifrunner.gnm1.ann1.E5V6X9 Arachis hypogaea HOM05D005824 ORTHO05D007029 1.6e-170 604.0 765 47.6
Lalb_Chr02g0154321 Lupinus albus HOM05D005824 ORTHO05D007029 2.1e-170 603.6 761 47.8
CAN.G1374.10 Capsicum annuum HOM05D005824 ORTHO05D007029 4.6e-170 602.4 753 49.1
Psat6g118640 Pisum sativum HOM05D005824 ORTHO05D007029 1.8e-169 600.5 815 44.9
Glyma.10G084300 Glycine max HOM05D005824 ORTHO05D007029 3.0e-169 599.7 763 47.7
Lj3g0001001 Lotus japonicus HOM05D005824 ORTHO05D007029 3.0e-169 599.7 763 45.9
Lj5g0026124 Lotus japonicus HOM05D005824 ORTHO05D007029 1.6e-167 594.0 763 45.9
Nitab4.5_0009690g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 3.6e-167 592.8 756 47.8
Glyma.02G192500 Glycine max HOM05D005824 ORTHO05D007029 4.8e-167 592.4 762 47.1
Medtr1g055080 Medicago truncatula HOM05D005824 ORTHO05D007029 4.8e-167 592.4 758 47.1
PGSC0003DMG400018251 Solanum tuberosum HOM05D005824 ORTHO05D007029 1.8e-166 590.5 754 48.9
Manes.06G027100 Manihot esculenta HOM05D005824 ORTHO05D007029 5.3e-166 589.0 748 46.9
TAR362G0448 Trochodendron aralioides HOM05D005824 ORTHO05D007029 1.7e-164 583.9 761 47.2
Cfa020078 Carpinus fangiana HOM05D005824 ORTHO05D007029 2.9e-164 583.2 758 46.4
Thecc.09G352900 Theobroma cacao HOM05D005824 ORTHO05D007029 1.4e-163 580.9 751 47.9
SalBow7G3942 Salvia bowleyana HOM05D005824 ORTHO05D007029 2.4e-163 580.1 752 46.8
MSTRG.15631 Avicennia marina HOM05D005824 ORTHO05D007029 7.1e-163 578.6 751 46.3
Gohir.A03G155800 Gossypium hirsutum HOM05D005824 ORTHO05D007029 9.3e-163 578.2 756 48.0
Cpa.g.sc48.209 Carica papaya HOM05D005824 ORTHO05D007029 2.1e-162 577.0 755 46.1
Lj5A322T66 Lonicera japonica HOM05D005824 ORTHO05D007029 6.0e-162 575.5 724 47.4
Gorai.005G200700 Gossypium raimondii HOM05D005824 ORTHO05D007029 1.3e-161 574.3 768 47.0
THA.LOC104821746 Tarenaya hassleriana HOM05D005824 ORTHO05D007029 3.0e-161 573.2 779 46.1
Eucgr.B01798 Eucalyptus grandis HOM05D005824 ORTHO05D007029 3.9e-161 572.8 759 46.6
Atru.chr12.1601 Acer truncatum HOM05D005824 ORTHO05D007029 8.1e-159 565.1 755 46.6
MBI19_g32704_MAGBIO Magnolia biondii HOM05D005824 ORTHO05D007029 1.8e-158 563.9 751 46.1
vmacro01596 Vaccinium macrocarpon HOM05D005824 ORTHO05D007029 4.5e-157 559.3 741 45.5
Migut.B00860 Erythranthe guttata HOM05D005824 ORTHO05D007029 5.8e-157 558.9 752 45.3
Phvul.007G265900 Phaseolus vulgaris HOM05D005824 ORTHO05D007029 1.3e-156 557.8 761 44.4
Aqoxy2G02580 Aquilegia oxysepala HOM05D005824 ORTHO05D007029 2.3e-153 547.0 750 44.8
PSO339G3868 Papaver somniferum HOM05D005824 ORTHO05D007029 3.9e-153 546.2 758 45.9
TWI38G0226 Tripterygium wilfordii HOM05D005824 ORTHO05D007029 5.7e-152 542.3 755 45.0
CANSAT54G1845 Cannabis sativa HOM05D005824 ORTHO05D007029 1.6e-151 540.8 742 44.2
Haze_20113 Corylus avellana HOM05D005824 ORTHO05D007029 3.7e-151 539.7 822 42.2
PSO384G0570 Papaver somniferum HOM05D005824 ORTHO05D007029 1.8e-150 537.3 757 44.5
PSO017G5895 Papaver somniferum HOM05D005824 ORTHO05D007029 1.5e-149 534.3 754 45.0
ClCG07G011770 Citrullus lanatus HOM05D005824 ORTHO05D007029 2.6e-149 533.5 757 43.9
Gohir.D02G178900 Gossypium hirsutum HOM05D005824 ORTHO05D007029 2.6e-149 533.5 768 44.8
Nn2g14227 Nelumbo nucifera HOM05D005824 ORTHO05D007029 4.5e-149 532.7 751 44.1
Prupe.6G306900 Prunus persica HOM05D005824 ORTHO05D007029 2.2e-148 530.4 803 42.5
CsaV3_4G002430 Cucumis sativus L. HOM05D005824 ORTHO05D007029 5.0e-148 529.3 757 44.3
MELO3C017799.2 Cucumis melo HOM05D005824 ORTHO05D007029 6.5e-148 528.9 762 44.4
Nitab4.5_0000185g0360 Nicotiana tabacum HOM05D005824 ORTHO05D007029 3.6e-146 523.1 768 43.9
MD12G1202100 Malus domestica HOM05D005824 ORTHO05D007029 1.0e-145 521.5 798 42.1
SGA_v2.0_scaffold33G13450 Striga asiatica HOM05D005824 ORTHO05D007029 6.7e-145 518.8 748 42.9
MD04G1189300 Malus domestica HOM05D005824 ORTHO05D007029 1.1e-144 518.1 800 41.4
PSO063G2449 Papaver somniferum HOM05D005824 ORTHO05D007029 3.7e-143 513.1 754 43.4
Sed0007659 Sechium edule HOM05D005824 ORTHO05D007029 3.1e-142 510.0 754 42.2
RcHm_v2.0_Chr3g0458051 Rosa chinensis HOM05D005824 ORTHO05D007029 1.2e-141 508.1 809 41.8
Duzib150G0567 Durio zibethinus HOM05D005824 ORTHO05D007029 3.8e-140 503.1 730 45.1
Thhalv10003721m.g Eutrema salsugineum HOM05D005824 ORTHO05D007029 5.0e-140 502.7 799 42.6
COL.COLO4_11087 Corchorus olitorius HOM05D005824 ORTHO05D007029 1.1e-139 501.5 755 42.4
Carub.0006s2449 Capsella rubella HOM05D005824 ORTHO05D007029 4.6e-138 496.1 760 42.8
Sp2g21220 Schrenkiella parvula HOM05D005824 ORTHO05D007029 1.0e-137 495.0 789 41.7
ECA247G2466 Erigeron canadensis HOM05D005824 ORTHO05D007029 4.1e-134 483.0 750 41.5
Peaxi162Scf00357g00429 Petunia axillaris HOM05D005824 ORTHO05D007029 1.3e-132 478.0 699 44.6
Aa31LG11G9880 Aethionema arabicum HOM05D005824 ORTHO05D007029 1.7e-132 477.6 772 41.6
FvH4_6g08180 Fragaria vesca HOM05D005824 ORTHO05D007029 1.4e-131 474.6 811 39.7
AT5G26760 Arabidopsis thaliana HOM05D005824 ORTHO05D007029 1.9e-131 474.2 778 40.6
FAN14G3202 Fragaria x ananassa HOM05D005824 ORTHO05D007029 3.2e-131 473.4 811 39.6
Hma1.2p1_1243F.1_g269980 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 7.2e-131 472.2 669 44.2
CARHR186810 Cardamine hirsuta HOM05D005824 ORTHO05D007029 1.6e-130 471.1 768 41.0
Duzib168G0004 Durio zibethinus HOM05D005824 ORTHO05D007029 1.4e-129 468.0 753 41.0
AL6G38630 Arabidopsis lyrata HOM05D005824 ORTHO05D007029 2.6e-128 463.8 864 38.9
DCAR_005271 Daucus carota HOM05D005824 ORTHO05D007029 3.2e-123 446.8 785 39.5
FAN09G3961 Fragaria x ananassa HOM05D005824 ORTHO05D007029 1.2e-122 444.9 811 39.1
CDE01G0540 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 4.0e-121 439.9 775 38.2
ATR0693G066 Amborella trichopoda HOM05D005824 ORTHO05D007029 8.8e-121 438.7 741 39.9
unitig_748.g6998 Utricularia gibba HOM05D005824 ORTHO05D000260 2.6e-120 437.2 736 40.2
A02p39030 Brassica napus HOM05D005824 ORTHO05D007029 4.1e-118 429.9 859 37.6
BraA02t08872Z Brassica rapa HOM05D005824 ORTHO05D007029 7.0e-118 429.1 853 37.6
BolC2t11924H Brassica oleracea HOM05D005824 ORTHO05D007029 2.0e-117 427.6 832 37.9
C02p58640 Brassica napus HOM05D005824 ORTHO05D007029 5.9e-117 426.0 831 37.9
Nitab4.5_0002783g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 7.2e-115 419.1 751 38.9
FAN05G5613 Fragaria x ananassa HOM05D005824 ORTHO05D007029 4.4e-112 409.8 786 38.2
Lsat_1_v5_gn_9_78801 Lactuca sativa HOM05D005824 ORTHO05D007029 1.7e-111 407.9 727 39.1
FAN02G4519 Fragaria x ananassa HOM05D005824 ORTHO05D007029 6.1e-106 389.4 788 36.5
BcaNung06222 Brassica carinata HOM05D005824 ORTHO05D007029 2.3e-105 387.5 827 37.1
PGR083G1123 Punica granatum HOM05D005824 ORTHO05D007029 1.1e-102 378.6 591 40.4
Ciclev10011677m.g Citrus clementina HOM05D005824 ORTHO05D007029 4.5e-101 373.2 468 48.1
Os05g0134300 Oryza sativa ssp. japonica HOM05D005824 ORTHO05D007029 4.3e-99 366.7 771 36.7
HanXRQChr12g0362901 Helianthus annuus HOM05D005824 ORTHO05D007029 2.8e-98 364.0 747 35.7
BolC7t44682H Brassica oleracea HOM05D005824 ORTHO05D007029 6.2e-82 309.7 762 35.2
C07p41490 Brassica napus HOM05D005824 ORTHO05D007029 2.0e-80 304.7 762 33.9
BcaNung03676 Brassica carinata HOM05D005824 ORTHO05D007029 1.4e-78 298.5 756 33.7
Actinidia35501 Actinidia chinensis HOM05D005824 ORTHO05D007029 2.4e-73 281.2 739 31.4
Zm00001eb354720 Zea mays HOM05D005824 ORTHO05D007029 4.4e-72 276.9 683 33.2
Solyc01g101010.4 Solanum lycopersicum HOM05D005824 ORTHO05D007029 2.7e-69 267.7 254 55.9
HPP92_021934 Vanilla planifolia HOM05D005824 ORTHO05D007029 1.1e-62 245.7 506 38.7
Mapoly0075s0015 Marchantia polymorpha HOM05D005824 ORTHO05D007029 9.6e-59 232.6 770 27.1
Gohir.A08G201701 Gossypium hirsutum HOM05D005824 ORTHO05D007029 3.1e-57 227.6 753 30.0
AUR62009842 Chenopodium quinoa HOM05D003327 ORTHO05D004535 5.8e-56 223.4 169 73.4
Pp3c6_10400 Physcomitrium patens HOM05D005824 ORTHO05D007029 5.4e-54 216.9 901 26.6
Nitab4.5_0000185g0370 Nicotiana tabacum HOM05D005824 ORTHO05D007029 3.5e-53 214.2 172 62.8
SGA_v2.0_scaffold438G51629 Striga asiatica HOM05D005824 ORTHO05D007029 3.5e-53 214.2 179 58.1
SEGI_20129 Sequoiadendron giganteum HOM05D005824 ORTHO05D007029 6.9e-49 199.9 324 40.1
SMO203G0090 Selaginella moellendorffii HOM05D005824 ORTHO05D007029 3.4e-48 197.6 748 25.1
A06p36990 Brassica napus HOM05D005824 ORTHO05D007029 2.5e-43 181.4 176 51.1
BraA06t26625Z Brassica rapa HOM05D005824 ORTHO05D007029 2.5e-43 181.4 176 51.1
Hma1.2p1_1553F.1_g290340 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 2.9e-39 167.9 730 28.5
Oeu060660.1 Olea europaea HOM05D005824 ORTHO05D007029 6.5e-39 166.8 128 65.6
HPP92_021933 Vanilla planifolia HOM05D005824 ORTHO05D007029 4.6e-37 160.6 186 45.7
AagrBONN_evm.TU.Sc2ySwM_117.2728 Anthoceros agrestis HOM05D005824 ORTHO05D007029 1.0e-36 159.5 750 23.9
CBR_g20185 Chara braunii HOM05D005824 ORTHO05D007029 4.8e-34 150.6 305 31.5
Dinv30929 Davidia involucrata HOM05D005824 ORTHO05D007029 7.6e-32 143.3 136 56.6
Cfa020079 Carpinus fangiana HOM05D005824 ORTHO05D007029 1.3e-23 115.9 82 69.5
Nitab4.5_0000185g0350 Nicotiana tabacum HOM05D005824 ORTHO05D007029 1.4e-20 105.9 105 52.4
CDE12G0845 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 6.7e-20 103.6 93 55.9
CANSAT54G0922 Cannabis sativa HOM05D005824 ORTHO05D007029 8.8e-20 103.2 233 37.3
Zm00001eb056090 Zea mays HOM05D000739 ORTHO05D007029 1.1e-17 96.3 110 45.5
Zm00001eb289330 Zea mays HOM05D005824 ORTHO05D007029 1.3e-15 89.4 100 46.0


User provided reference genes

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