Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1120G115 Amborella trichopoda HOM05D003909 ORTHO05D004478 4.2e-235 817.8 455 100.0
TAR626G0719 Trochodendron aralioides HOM05D003909 ORTHO05D004478 2.4e-105 386.7 461 55.1
TAR383G0140 Trochodendron aralioides HOM05D003909 ORTHO05D004478 2.7e-104 383.3 463 54.9
TAR636G1173 Trochodendron aralioides HOM05D003909 ORTHO05D004478 5.6e-102 375.6 468 53.8
Thecc.06G085100 Theobroma cacao HOM05D003909 ORTHO05D004478 2.3e-100 370.2 476 52.5
Dinv30518 Davidia involucrata HOM05D003909 ORTHO05D004478 2.2e-98 363.6 461 52.7
Aqoxy7G01805 Aquilegia oxysepala HOM05D003909 ORTHO05D004478 1.3e-95 354.4 461 51.2
CiPaw.01G240200 Carya illinoinensis HOM05D003909 ORTHO05D004478 3.0e-95 353.2 463 51.6
Duzib160G0939 Durio zibethinus HOM05D003909 ORTHO05D004478 7.3e-94 348.6 480 50.4
Duzib192G0576 Durio zibethinus HOM05D003909 ORTHO05D004478 7.3e-94 348.6 477 49.7
QL05p024883 Quercus lobata HOM05D003909 ORTHO05D004478 1.6e-93 347.4 459 52.3
QL05p024997 Quercus lobata HOM05D003909 ORTHO05D004478 1.6e-93 347.4 459 52.3
CiPaw.02G151900 Carya illinoinensis HOM05D003909 ORTHO05D004478 3.6e-93 346.3 461 50.5
Lj5C61T11 Lonicera japonica HOM05D003909 ORTHO05D004478 3.6e-93 346.3 466 50.9
Rhsim12G0197200 Rhododendron simsii HOM05D003909 ORTHO05D004478 3.6e-93 346.3 457 53.2
CSS0044508 Camellia sinensis var. sinensis HOM05D003909 ORTHO05D004478 1.1e-92 344.7 450 52.0
Manes.11G048200 Manihot esculenta HOM05D003909 ORTHO05D004478 1.4e-92 344.4 469 49.9
CAN.G395.16 Capsicum annuum HOM05D003909 ORTHO05D004478 2.3e-92 343.6 475 49.1
Eucgr.F02948 Eucalyptus grandis HOM05D003909 ORTHO05D004478 5.2e-92 342.4 469 50.3
Lj9P507T43 Lonicera japonica HOM05D003909 ORTHO05D004478 8.9e-92 341.7 458 50.0
Peaxi162Scf00015g10039 Petunia axillaris HOM05D003909 ORTHO05D004478 2.6e-91 340.1 476 51.3
Prupe.3G072500 Prunus persica HOM05D003909 ORTHO05D004478 2.6e-91 340.1 472 50.2
MD09G1214400 Malus domestica HOM05D003909 ORTHO05D004478 9.9e-91 338.2 466 53.0
MBI04_g18158_MAGBIO Magnolia biondii HOM05D003909 ORTHO05D004478 1.7e-90 337.4 456 51.8
MD17G1196800 Malus domestica HOM05D003909 ORTHO05D004478 2.2e-90 337.0 464 53.0
Nitab4.5_0000351g0150 Nicotiana tabacum HOM05D003909 ORTHO05D004478 1.4e-89 334.3 475 48.4
Sabra01G0147800 Salix brachista HOM05D003909 ORTHO05D004478 1.4e-89 334.3 515 46.0
Dinv38052 Davidia involucrata HOM05D003909 ORTHO05D004478 2.4e-89 333.6 459 53.6
PGSC0003DMG400002641 Solanum tuberosum HOM05D003909 ORTHO05D004478 1.6e-88 330.9 465 50.5
COL.COLO4_30356 Corchorus olitorius HOM05D003909 ORTHO05D004478 3.5e-88 329.7 467 49.7
Nitab4.5_0002327g0010 Nicotiana tabacum HOM05D003909 ORTHO05D004478 4.6e-88 329.3 471 47.6
Gorai.002G058700 Gossypium raimondii HOM05D003909 ORTHO05D004478 6.0e-88 328.9 470 49.6
PSO782G4639 Papaver somniferum HOM05D003909 ORTHO05D004478 7.8e-88 328.6 459 51.2
FvH4_6g31000 Fragaria vesca HOM05D003909 ORTHO05D004478 1.0e-87 328.2 472 48.3
SEGI_39159 Sequoiadendron giganteum HOM05D003909 ORTHO05D004478 1.0e-87 328.2 493 47.9
Ciclev10025626m.g Citrus clementina HOM05D003909 ORTHO05D004478 2.3e-87 327.0 484 48.6
Hma1.2p1_0682F.1_g202710 Hydrangea macrophylla HOM05D003909 ORTHO05D004478 2.3e-87 327.0 466 51.9
MSTRG.22695 Avicennia marina HOM05D003909 ORTHO05D004478 3.9e-87 326.2 496 47.4
Cc04_g03530 Coffea canephora HOM05D003909 ORTHO05D004478 3.9e-87 326.2 461 47.9
Potri.001G179100 Populus trichocarpa HOM05D003909 ORTHO05D004478 8.6e-87 325.1 509 47.3
Actinidia01799 Actinidia chinensis HOM05D001315 ORTHO05D001618 1.9e-86 323.9 466 51.3
Actinidia32764 Actinidia chinensis HOM05D003909 ORTHO05D004478 1.9e-86 323.9 458 51.5
PSO063G3399 Papaver somniferum HOM05D003909 ORTHO05D004478 1.9e-86 323.9 457 51.0
Sopen03g039170 Solanum pennellii HOM05D003909 ORTHO05D004478 4.3e-86 322.8 463 48.6
Atru.chr1.3248 Acer truncatum HOM05D003909 ORTHO05D004478 5.6e-86 322.4 485 48.7
Solyc03g120280.1 Solanum lycopersicum HOM05D003909 ORTHO05D004478 5.6e-86 322.4 471 50.7
CSS0004276 Camellia sinensis var. sinensis HOM05D003909 ORTHO05D004478 9.5e-86 321.6 456 49.6
Sopen06g025020 Solanum pennellii HOM05D003909 ORTHO05D004478 9.5e-86 321.6 468 48.1
Nitab4.5_0006801g0020 Nicotiana tabacum HOM05D003909 ORTHO05D004478 1.6e-85 320.9 474 49.8
Haze_16447 Corylus avellana HOM05D003909 ORTHO05D004478 3.6e-85 319.7 463 47.9
Cfa002057 Carpinus fangiana HOM05D003909 ORTHO05D004478 1.1e-84 318.2 460 49.3
Gohir.D03G074300 Gossypium hirsutum HOM05D003909 ORTHO05D004478 3.1e-84 316.6 469 50.3
Actinidia08971 Actinidia chinensis HOM05D003909 ORTHO05D004478 6.8e-84 315.5 465 51.0
Nitab4.5_0000671g0020 Nicotiana tabacum HOM05D003909 ORTHO05D004478 6.8e-84 315.5 476 49.4
vmacro18921 Vaccinium macrocarpon HOM05D003909 ORTHO05D004478 2.6e-83 313.5 451 49.0
Gohir.A02G122200 Gossypium hirsutum HOM05D003909 ORTHO05D004478 3.4e-83 313.2 467 48.0
MBI01_g16632_MAGBIO Magnolia biondii HOM05D003909 ORTHO05D004478 3.4e-83 313.2 433 50.6
GSVIVG01017123001 Vitis vinifera HOM05D003909 ORTHO05D004478 4.4e-83 312.8 455 46.4
Lsat_1_v5_gn_1_34841 Lactuca sativa HOM05D003909 ORTHO05D004478 1.3e-82 311.2 463 48.6
Manes.04G122500 Manihot esculenta HOM05D003909 ORTHO05D004478 2.2e-82 310.5 462 49.4
ECA247G1970 Erigeron canadensis HOM05D003909 ORTHO05D004478 3.8e-82 309.7 460 49.6
Sabra03G0031800 Salix brachista HOM05D003909 ORTHO05D004478 6.4e-82 308.9 506 45.1
Hma1.2p1_0323F.1_g125230 Hydrangea macrophylla HOM05D003909 ORTHO05D004478 1.4e-81 307.8 468 49.6
FAN05G4496 Fragaria x ananassa HOM05D003909 ORTHO05D004478 2.4e-81 307.0 464 48.5
Thhalv10020773m.g Eutrema salsugineum HOM05D003909 ORTHO05D004478 3.2e-81 306.6 466 47.0
TWI75G1291 Tripterygium wilfordii HOM05D003909 ORTHO05D004478 4.2e-81 306.2 462 47.4
Ah.01g006030 Amaranthus hybridus HOM05D003909 ORTHO05D004478 1.2e-80 304.7 468 48.3
FAN02G1452 Fragaria x ananassa HOM05D003909 ORTHO05D004478 3.5e-80 303.1 463 47.9
Aa31LG8G3120 Aethionema arabicum HOM05D003909 ORTHO05D004478 6.0e-80 302.4 485 47.0
Cpa.g.c31444.1 Carica papaya HOM05D003909 ORTHO05D004478 6.0e-80 302.4 485 44.9
CANSAT56G2173 Cannabis sativa HOM05D003909 ORTHO05D004478 7.8e-80 302.0 475 45.1
MELO3C024224.2 Cucumis melo HOM05D003909 ORTHO05D004478 7.8e-80 302.0 491 47.0
VMungo1080G0623 Vigna mungo HOM05D003909 ORTHO05D004478 7.8e-80 302.0 483 45.5
CAN.G438.59 Capsicum annuum HOM05D003909 ORTHO05D004478 1.3e-79 301.2 478 47.9
Nn8g39239 Nelumbo nucifera HOM05D003909 ORTHO05D004478 1.3e-79 301.2 243 68.7
MSTRG.4728 Avicennia marina HOM05D003909 ORTHO05D004478 1.7e-79 300.8 470 46.8
Sp3g14320 Schrenkiella parvula HOM05D003909 ORTHO05D004478 1.7e-79 300.8 452 48.2
Potri.003G056400 Populus trichocarpa HOM05D003909 ORTHO05D004478 2.3e-79 300.4 537 42.3
Carub.0001s4138 Capsella rubella HOM05D003909 ORTHO05D004478 3.0e-79 300.1 472 46.6
SGA_v2.0_scaffold5G02599 Striga asiatica HOM05D003909 ORTHO05D004478 5.1e-79 299.3 463 46.9
TWI18G1146 Tripterygium wilfordii HOM05D003909 ORTHO05D004478 1.9e-78 297.4 497 46.3
Solyc06g066740.3 Solanum lycopersicum HOM05D003909 ORTHO05D004478 2.5e-78 297.0 479 45.3
CARHR091100 Cardamine hirsuta HOM05D003909 ORTHO05D004478 3.3e-78 296.6 472 46.8
PGR102G2609 Punica granatum HOM05D003909 ORTHO05D004478 4.3e-78 296.2 481 46.8
Glyma.15G013600 Glycine max HOM05D003909 ORTHO05D004478 1.6e-77 294.3 477 45.9
Lj3g0018129 Lotus japonicus HOM05D003909 ORTHO05D004478 1.6e-77 294.3 469 46.9
Sc15g0001250 Simmondsia chinensis HOM05D003909 ORTHO05D004478 1.6e-77 294.3 475 46.9
AUR62016436 Chenopodium quinoa HOM05D003909 ORTHO05D004478 3.6e-77 293.1 454 46.9
AT3G15970 Arabidopsis thaliana HOM05D003909 ORTHO05D004478 6.2e-77 292.4 490 45.9
HanXRQChr02g0032691 Helianthus annuus HOM05D003909 ORTHO05D004478 1.4e-76 291.2 469 46.7
HanXRQChr10g0314961 Helianthus annuus HOM05D003909 ORTHO05D004478 1.4e-76 291.2 471 45.9
AT1G52380 Arabidopsis thaliana HOM05D003909 ORTHO05D004478 1.8e-76 290.8 477 45.3
AL3G28620 Arabidopsis lyrata HOM05D003909 ORTHO05D004478 4.0e-76 289.7 491 44.8
Phvul.005G172100 Phaseolus vulgaris HOM05D003909 ORTHO05D004478 4.0e-76 289.7 488 45.7
CsaV3_7G033090 Cucumis sativus L. HOM05D003909 ORTHO05D004478 5.3e-76 289.3 491 46.0
Migut.I00858 Erythranthe guttata HOM05D003909 ORTHO05D004478 6.9e-76 288.9 461 46.0
ClCG09G002210 Citrullus lanatus HOM05D003909 ORTHO05D004478 9.0e-76 288.5 514 43.8
Ah.01g021220 Amaranthus hybridus HOM05D003909 ORTHO05D004478 1.2e-75 288.1 466 45.7
AUR62011621 Chenopodium quinoa HOM05D003909 ORTHO05D004478 1.2e-75 288.1 452 46.2
Os05g0349500 Oryza sativa ssp. japonica HOM05D003909 ORTHO05D004478 4.4e-75 286.2 507 42.2
Glyma.13G360300 Glycine max HOM05D003909 ORTHO05D004478 7.6e-75 285.4 497 44.3
DCAR_026310 Daucus carota HOM05D003909 ORTHO05D004478 2.9e-74 283.5 486 45.3
Nn2g11803 Nelumbo nucifera HOM05D003909 ORTHO05D004478 2.9e-74 283.5 257 65.4
unitig_21.g20517 Utricularia gibba HOM05D003909 ORTHO05D004478 4.9e-74 282.7 466 44.0
Ca_20399_v3 Cicer arietinum L. HOM05D003909 ORTHO05D004478 1.1e-73 281.6 468 45.7
BcaB02g10997 Brassica carinata HOM05D003909 ORTHO05D004478 1.4e-73 281.2 465 44.7
Carub.0003s1570 Capsella rubella HOM05D003909 ORTHO05D004478 1.4e-73 281.2 465 45.6
Sed0003438 Sechium edule HOM05D003909 ORTHO05D004478 3.2e-73 280.0 510 43.3
arahy.Tifrunner.gnm1.ann1.63P8XR Arachis hypogaea HOM05D003909 ORTHO05D004478 4.2e-73 279.6 472 45.1
THA.LOC104810518 Tarenaya hassleriana HOM05D003909 ORTHO05D004478 1.2e-72 278.1 452 48.5
EL10Ac9g21982 Beta vulgaris HOM05D003909 ORTHO05D004478 1.6e-72 277.7 450 46.0
HPP92_019977 Vanilla planifolia HOM05D003909 ORTHO05D004478 4.6e-72 276.2 472 46.0
AL1G60630 Arabidopsis lyrata HOM05D003909 ORTHO05D004478 1.3e-71 274.6 471 46.5
Lalb_Chr24g0395791 Lupinus albus HOM05D003909 ORTHO05D004478 1.3e-71 274.6 465 46.0
Lalb_Chr22g0351201 Lupinus albus HOM05D003909 ORTHO05D004478 2.3e-71 273.9 474 46.4
PGSC0003DMG400016510 Solanum tuberosum HOM05D003909 ORTHO05D004478 2.3e-71 273.9 477 44.0
Medtr4g011930 Medicago truncatula HOM05D003909 ORTHO05D004478 5.1e-71 272.7 475 45.5
Aa31LG10G2540 Aethionema arabicum HOM05D003909 ORTHO05D004478 6.6e-71 272.3 462 44.8
TPR.G24152 Trifolium pratense HOM05D003909 ORTHO05D004478 8.7e-71 271.9 453 45.3
BraA05t20804Z Brassica rapa HOM05D003909 ORTHO05D004478 1.5e-70 271.2 465 44.1
Oeu033481.1 Olea europaea HOM05D003909 ORTHO05D004478 1.9e-70 270.8 468 45.9
CARHR042530 Cardamine hirsuta HOM05D003909 ORTHO05D004478 2.5e-70 270.4 463 44.7
A05p19040 Brassica napus HOM05D003909 ORTHO05D004478 3.3e-70 270.0 465 43.9
Sed0010123 Sechium edule HOM05D003909 ORTHO05D004478 3.3e-70 270.0 513 41.7
Rhsim08G0220400 Rhododendron simsii HOM05D003909 ORTHO05D004478 4.3e-70 269.6 420 48.3
THA.LOC104818004 Tarenaya hassleriana HOM05D003909 ORTHO05D004478 9.6e-70 268.5 465 45.8
BcaC08g43991 Brassica carinata HOM05D003909 ORTHO05D004478 1.6e-69 267.7 464 43.5
C06p13960 Brassica napus HOM05D003909 ORTHO05D004478 1.6e-69 267.7 464 43.5
BolC6t36574H Brassica oleracea HOM05D001315 ORTHO05D001618 1.6e-69 267.7 464 43.5
SalBow2G1612 Salvia bowleyana HOM05D003909 ORTHO05D004478 6.9e-68 262.3 396 48.2
SEGI_02359 Sequoiadendron giganteum HOM05D003909 ORTHO05D004478 9.0e-68 261.9 476 46.2
Sp1g38990 Schrenkiella parvula HOM05D003909 ORTHO05D004478 4.5e-67 259.6 471 42.9
Thhalv10011504m.g Eutrema salsugineum HOM05D003909 ORTHO05D004478 5.8e-67 259.2 470 43.4
BraA06t23402Z Brassica rapa HOM05D003909 ORTHO05D004478 2.2e-66 257.3 460 44.1
BolC6t35869H Brassica oleracea HOM05D003909 ORTHO05D004478 3.8e-66 256.5 467 43.7
A06p01850 Brassica napus HOM05D003909 ORTHO05D004478 8.4e-66 255.4 462 43.5
C06p07830 Brassica napus HOM05D003909 ORTHO05D004478 3.2e-65 253.4 463 43.8
RcHm_v2.0_Chr2g0137631 Rosa chinensis HOM05D003909 ORTHO05D004478 1.0e-63 248.4 451 40.8
Mapoly0073s0079 Marchantia polymorpha HOM05D003909 ORTHO05D004478 5.1e-63 246.1 485 40.0
Psat7g253000 Pisum sativum HOM05D003909 ORTHO05D004478 5.1e-63 246.1 454 40.7
Lalb_Chr14g0373481 Lupinus albus HOM05D003909 ORTHO05D004478 8.7e-63 245.4 485 41.9
HanXRQChr04g0096531 Helianthus annuus HOM05D003909 ORTHO05D004478 1.9e-62 244.2 499 42.3
Zm00001eb360880 Zea mays HOM05D003909 ORTHO05D004478 9.6e-62 241.9 462 44.2
Zm00001eb155830 Zea mays HOM05D003909 ORTHO05D004478 2.5e-54 217.2 469 39.0
MBI04_g40091_MAGBIO Magnolia biondii HOM05D003909 ORTHO05D004478 3.1e-52 210.3 372 44.6
BcaC01g03847 Brassica carinata HOM05D003909 ORTHO05D004478 2.6e-51 207.2 461 39.3
C03p47980 Brassica napus HOM05D003909 ORTHO05D004478 2.6e-51 207.2 461 39.3
BolC3t17078H Brassica oleracea HOM05D003909 ORTHO05D004478 7.6e-51 205.7 461 39.0
SHI24405 Sapria himalayana HOM05D003909 ORTHO05D004478 1.1e-49 201.8 457 38.5
BcaC08g43418 Brassica carinata HOM05D003909 ORTHO05D004478 1.2e-48 198.4 459 36.4
CDE06G1609 Ceratophyllum demersum HOM05D003909 ORTHO05D004478 9.7e-46 188.7 370 42.4
AagrBONN_evm.TU.Sc2ySwM_228.3069 Anthoceros agrestis HOM05D003909 ORTHO05D004478 4.5e-43 179.9 482 39.2
BcaC08g43420 Brassica carinata HOM05D003909 ORTHO05D004478 2.9e-42 177.2 148 63.5
SMO351G0411 Selaginella moellendorffii HOM05D003848 ORTHO05D004616 1.9e-41 174.5 446 36.1
MBI04_g43353_MAGBIO Magnolia biondii HOM05D003909 ORTHO05D004478 3.2e-41 173.7 172 59.9
Pp3c3_6080 Physcomitrium patens HOM05D003909 ORTHO05D004478 9.4e-41 172.2 469 37.3
unitig_744.g24336 Utricularia gibba HOM05D003909 ORTHO05D004478 1.9e-33 147.9 373 37.3
Actinidia14363 Actinidia chinensis HOM05D003909 ORTHO05D004478 3.1e-28 130.6 88 71.6
A06p01830 Brassica napus HOM05D003909 ORTHO05D004478 6.5e-26 122.9 105 66.7
BraA06t23400Z Brassica rapa HOM05D003909 ORTHO05D004478 1.3e-18 98.6 91 63.7
CBR_g38869 Chara braunii HOM05D003909 ORTHO05D004478 2.3e-15 87.8 481 28.1
A03p39600 Brassica napus HOM05D003909 ORTHO05D004478 5.2e-15 86.7 88 55.7
Psat4g143640 Pisum sativum HOM05D002956 ORTHO05D008031 1.2e-14 85.5 138 45.7
BcaC01g01324 Brassica carinata HOM05D003909 ORTHO05D004478 3.7e-13 80.5 128 47.7
Medtr1g112060 Medicago truncatula HOM05D003909 ORTHO05D004478 1.1e-12 79.0 108 46.3
HPP92_020042 Vanilla planifolia HOM05D003909 ORTHO05D004478 2.4e-12 77.8 132 43.9
MCO12G345 Micromonas commoda HOM05D003909 ORTHO05D004478 3.1e-12 77.4 294 30.6
unitig_744.g24337 Utricularia gibba HOM05D003909 ORTHO05D004478 3.1e-12 77.4 68 58.8
arahy.Tifrunner.gnm1.ann1.HH7TIC Arachis hypogaea HOM05D003909 ORTHO05D004478 2.0e-11 74.7 104 46.2
Cre15.g641000 Chlamydomonas reinhardtii HOM05D003909 ORTHO05D004478 1.0e-10 72.4 88 42.0
C06p07870 Brassica napus HOM05D003909 ORTHO05D004478 2.9e-10 70.9 128 42.2
BolC6t35871H Brassica oleracea HOM05D003909 ORTHO05D004478 2.9e-10 70.9 128 42.2
C03p90640 Brassica napus HOM05D003909 ORTHO05D004478 5.0e-10 70.1 121 43.8
BolC3t21386H Brassica oleracea HOM05D001315 ORTHO05D001618 5.0e-10 70.1 121 43.8
Cfa024721 Carpinus fangiana HOM05D003909 ORTHO05D121609 4.2e-09 67.0 65 52.3
MBI04_g43354_MAGBIO Magnolia biondii HOM05D003909 ORTHO05D004478 2.7e-08 64.3 41 82.9
QL06p050723 Quercus lobata HOM05D002258 ORTHO05D002539 2.0e-06 58.2 146 30.1


User provided reference genes

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