Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 1.1e-130 469.9 236 100.0
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 2.1e-76 289.7 239 62.3
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 4.6e-76 288.5 237 62.0
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 6.7e-75 284.6 236 59.7
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 2.0e-74 283.1 235 61.3
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 2.5e-74 282.7 236 59.3
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 4.8e-73 278.5 233 61.4
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 1.4e-72 276.9 234 59.4
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 1.8e-72 276.6 239 59.4
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.8e-72 276.6 225 59.1
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.8e-72 276.6 225 59.1
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 5.3e-72 275.0 240 58.3
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 5.3e-72 275.0 234 59.0
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 6.9e-72 274.6 228 58.8
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 6.9e-72 274.6 228 58.8
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 6.9e-72 274.6 225 60.9
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 9.1e-72 274.2 242 58.7
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 9.1e-72 274.2 228 60.1
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.2e-71 273.9 230 59.1
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 1.2e-71 273.9 215 64.2
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 1.5e-71 273.5 231 58.9
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 2.6e-71 272.7 234 59.0
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 2.6e-71 272.7 229 60.7
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.4e-71 272.3 214 64.5
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 3.4e-71 272.3 228 58.3
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 4.5e-71 271.9 223 61.0
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 4.5e-71 271.9 229 60.7
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 5.9e-71 271.6 233 59.2
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 7.7e-71 271.2 230 60.4
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 2.2e-70 269.6 230 58.3
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 3.8e-70 268.9 232 59.9
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 5.0e-70 268.5 261 54.4
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 5.0e-70 268.5 227 59.9
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 6.5e-70 268.1 230 57.4
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 8.5e-70 267.7 233 59.7
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 2.5e-69 266.2 228 55.3
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 3.2e-69 265.8 229 57.6
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 4.2e-69 265.4 212 60.8
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 5.5e-69 265.0 229 60.7
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 5.5e-69 265.0 236 56.8
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 5.5e-69 265.0 225 58.7
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 7.2e-69 264.6 242 55.0
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 9.4e-69 264.2 232 57.8
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 1.2e-68 263.8 231 57.6
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.6e-68 263.5 225 58.7
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 4.7e-68 261.9 226 58.0
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 4.7e-68 261.9 218 59.2
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 7.9e-68 261.2 229 57.6
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 7.9e-68 261.2 226 56.2
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 7.9e-68 261.2 225 58.2
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 1.0e-67 260.8 198 64.6
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 1.0e-67 260.8 239 56.1
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 1.8e-67 260.0 227 58.6
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 1.8e-67 260.0 227 55.5
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 2.3e-67 259.6 229 57.2
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 3.0e-67 259.2 235 56.6
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 3.9e-67 258.8 238 55.9
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 2.0e-66 256.5 227 58.1
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 2.0e-66 256.5 227 55.9
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 3.3e-66 255.8 228 57.0
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 4.4e-66 255.4 229 56.3
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 7.4e-66 254.6 231 55.8
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 9.7e-66 254.2 228 56.6
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 1.3e-65 253.8 235 55.3
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.7e-65 253.4 225 56.0
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 2.2e-65 253.1 229 56.8
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 2.8e-65 252.7 230 56.5
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 2.8e-65 252.7 282 49.3
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 1.8e-64 250.0 191 62.3
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.8e-64 250.0 236 53.0
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 4.1e-64 248.8 232 55.6
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 7.0e-64 248.1 247 52.6
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 9.1e-64 247.7 193 62.7
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 9.1e-64 247.7 193 62.7
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 2.0e-63 246.5 236 52.5
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 3.5e-63 245.7 234 53.0
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 4.5e-63 245.4 240 52.9
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.2e-62 243.0 251 51.4
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 2.9e-62 242.7 229 53.7
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 3.8e-62 242.3 243 51.9
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 6.5e-62 241.5 252 49.6
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 1.1e-61 240.7 232 55.2
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 2.1e-60 236.5 231 52.8
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 3.6e-60 235.7 232 53.4
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 1.8e-59 233.4 238 52.1
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 5.2e-59 231.9 173 64.2
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 5.2e-59 231.9 236 52.5
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 6.7e-59 231.5 265 50.2
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 2.6e-58 229.6 234 51.3
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 3.3e-58 229.2 323 41.8
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 2.8e-57 226.1 222 53.2
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 9.1e-56 221.1 238 50.4
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 4.5e-55 218.8 224 50.9
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 1.2e-52 210.7 235 48.9
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 8.0e-52 208.0 229 48.9
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 5.2e-51 205.3 237 47.3
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 5.7e-50 201.8 190 53.7
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 1.6e-47 193.7 423 32.9
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 1.2e-44 184.1 132 64.4
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 4.0e-43 179.1 223 43.5
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 2.8e-36 156.4 158 52.5
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 1.5e-34 150.6 226 40.3
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.7e-30 137.1 157 51.0
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 5.0e-30 135.6 237 34.6
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 3.2e-24 116.3 224 34.4
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 7.0e-24 115.2 95 52.6
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 9.2e-24 114.8 97 54.6
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 3.5e-23 112.8 98 64.3
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.7e-22 110.5 213 31.9
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 3.0e-22 109.8 230 34.8
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 1.6e-20 104.0 98 48.0
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.1e-20 103.6 132 40.2
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 1.5e-18 97.4 83 67.5
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 1.3e-17 94.4 131 43.5
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 1.4e-16 90.9 170 32.9
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 2.1e-15 87.0 105 49.5
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 2.3e-14 83.6 96 47.9
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 1.2e-12 77.8 86 53.5
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 1.1e-11 74.7 88 47.7
Pp3c3_5070 Physcomitrium patens HOM05D000160 ORTHO05D000496 1.3e-09 67.8 158 27.2
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 2.2e-09 67.0 50 60.0
Pp3c13_7410 Physcomitrium patens HOM05D000160 ORTHO05D000496 2.2e-09 67.0 158 29.1
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 4.9e-09 65.9 155 25.8
Pp3c1_15160 Physcomitrium patens HOM05D000160 ORTHO05D316923 2.7e-07 60.1 147 25.2


User provided reference genes

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