Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0810G226 Amborella trichopoda HOM05D005767 ORTHO05D006785 0.0e+00 1118.2 547 100.0
Nn1g05917 Nelumbo nucifera HOM05D005767 ORTHO05D006785 1.9e-165 586.6 585 53.3
TAR376G0924 Trochodendron aralioides HOM05D005767 ORTHO05D006785 1.7e-161 573.5 593 51.8
Cc07_g10770 Coffea canephora HOM05D005767 ORTHO05D006785 1.9e-160 570.1 554 54.0
Dinv33631 Davidia involucrata HOM05D005767 ORTHO05D006785 7.8e-159 564.7 594 51.9
PSO541G2118 Papaver somniferum HOM05D005767 ORTHO05D006785 9.5e-157 557.8 580 52.4
CSS0010624 Camellia sinensis var. sinensis HOM05D005767 ORTHO05D006785 2.3e-155 553.1 591 51.1
Sc16g0002260 Simmondsia chinensis HOM05D005767 ORTHO05D006785 1.2e-154 550.8 571 51.5
Lsat_1_v5_gn_4_144841 Lactuca sativa HOM05D005767 ORTHO05D006785 5.8e-154 548.5 545 53.2
Manes.01G146000 Manihot esculenta HOM05D005767 ORTHO05D006785 5.8e-154 548.5 594 50.3
CiPaw.07G058900 Carya illinoinensis HOM05D005767 ORTHO05D006785 1.3e-153 547.4 539 52.7
AUR62003364 Chenopodium quinoa HOM05D005767 ORTHO05D006785 2.9e-153 546.2 579 50.9
ECA232G4495 Erigeron canadensis HOM05D005767 ORTHO05D006785 4.9e-153 545.4 544 54.2
MSTRG.23406 Avicennia marina HOM05D005767 ORTHO05D006785 1.9e-152 543.5 550 53.1
Nitab4.5_0006119g0040 Nicotiana tabacum HOM05D005767 ORTHO05D006785 1.2e-151 540.8 546 56.0
Lj4g0015609 Lotus japonicus HOM05D005767 ORTHO05D006785 1.6e-151 540.4 583 51.3
FvH4_1g11761 Fragaria vesca HOM05D005767 ORTHO05D006785 2.1e-151 540.0 580 51.0
FAN19G2575 Fragaria x ananassa HOM05D005767 ORTHO05D006785 3.5e-151 539.3 580 51.6
MBI09_g09407_MAGBIO Magnolia biondii HOM05D005767 ORTHO05D006785 7.8e-151 538.1 566 52.8
COL.COLO4_21902 Corchorus olitorius HOM05D005767 ORTHO05D006785 1.0e-150 537.7 582 50.0
QL06p032910 Quercus lobata HOM05D005767 ORTHO05D006785 2.3e-150 536.6 589 51.1
CAN.G1735.5 Capsicum annuum HOM05D005767 ORTHO05D006785 3.9e-150 535.8 553 54.4
TPR.G27975 Trifolium pratense HOM05D005767 ORTHO05D006785 3.9e-150 535.8 582 51.0
VMungo0251G0680 Vigna mungo HOM05D005767 ORTHO05D006785 3.9e-150 535.8 588 50.5
Thhalv10024709m.g Eutrema salsugineum HOM05D005767 ORTHO05D006785 1.5e-149 533.9 583 49.6
Lj2C469G1 Lonicera japonica HOM05D005767 ORTHO05D006785 1.5e-149 533.9 532 54.1
Ciclev10025146m.g Citrus clementina HOM05D005767 ORTHO05D006785 1.9e-149 533.5 600 48.8
HanXRQChr09g0256711 Helianthus annuus HOM05D005767 ORTHO05D006785 1.9e-149 533.5 547 51.6
Potri.007G057400 Populus trichocarpa HOM05D005767 ORTHO05D006785 1.9e-149 533.5 593 48.9
MELO3C007906.2 Cucumis melo HOM05D005767 ORTHO05D006785 9.5e-149 531.2 589 49.1
Prupe.7G168600 Prunus persica HOM05D005767 ORTHO05D006785 9.5e-149 531.2 590 49.2
Sopen03g006310 Solanum pennellii HOM05D005767 ORTHO05D006785 1.6e-148 530.4 549 54.6
Ca_22378_v3 Cicer arietinum L. HOM05D005767 ORTHO05D006785 2.1e-148 530.0 584 49.8
Aqoxy6G02211 Aquilegia oxysepala HOM05D005767 ORTHO05D006785 3.6e-148 529.3 573 51.5
MD02G1131900 Malus domestica HOM05D005767 ORTHO05D006785 6.2e-148 528.5 580 49.8
Medtr8g075810 Medicago truncatula HOM05D005767 ORTHO05D006785 8.1e-148 528.1 580 50.5
HPP92_005447 Vanilla planifolia HOM05D005767 ORTHO05D006785 1.8e-147 526.9 593 48.9
Nitab4.5_0000438g0060 Nicotiana tabacum HOM05D005767 ORTHO05D006785 3.1e-147 526.2 561 54.2
RcHm_v2.0_Chr2g0099381 Rosa chinensis HOM05D005767 ORTHO05D006785 3.1e-147 526.2 579 50.3
Thecc.01G018100 Theobroma cacao HOM05D005767 ORTHO05D006785 3.1e-147 526.2 588 48.5
Ah.03g148810 Amaranthus hybridus HOM05D005767 ORTHO05D006785 5.2e-147 525.4 570 50.2
Atru.chr3.804 Acer truncatum HOM05D005767 ORTHO05D006785 6.8e-147 525.0 588 48.8
Carub.0007s0418 Capsella rubella HOM05D005767 ORTHO05D006785 6.8e-147 525.0 590 48.1
Sed0019779 Sechium edule HOM05D005767 ORTHO05D006785 8.9e-147 524.6 581 50.1
arahy.Tifrunner.gnm1.ann1.12F6XV Arachis hypogaea HOM05D005767 ORTHO05D006785 2.0e-146 523.5 576 50.3
AT4G36050 Arabidopsis thaliana HOM05D005767 ORTHO05D006785 2.6e-146 523.1 588 48.6
arahy.Tifrunner.gnm1.ann1.G0D851 Arachis hypogaea HOM05D005767 ORTHO05D006785 3.4e-146 522.7 576 50.3
Peaxi162Scf00050g00215 Petunia axillaris HOM05D005767 ORTHO05D006785 4.4e-146 522.3 554 53.4
Sp7g33830 Schrenkiella parvula HOM05D005767 ORTHO05D006785 7.6e-146 521.5 584 48.3
Gohir.A11G175000 Gossypium hirsutum HOM05D005767 ORTHO05D006785 9.9e-146 521.2 605 47.8
Cpa.g.sc6.256 Carica papaya HOM05D005767 ORTHO05D006785 2.9e-145 519.6 592 49.2
SGA_v2.0_scaffold76G25121 Striga asiatica HOM05D005767 ORTHO05D006785 6.4e-145 518.5 584 49.7
Aa31LG6G13010 Aethionema arabicum HOM05D005767 ORTHO05D006785 1.1e-144 517.7 559 49.0
Gorai.007G194300 Gossypium raimondii HOM05D005767 ORTHO05D006785 1.4e-144 517.3 602 48.0
CDE04G0100 Ceratophyllum demersum HOM05D005767 ORTHO05D006785 4.1e-144 515.8 565 51.0
CsaV3_6G047130 Cucumis sativus L. HOM05D005767 ORTHO05D006785 4.1e-144 515.8 572 49.3
Haze_03760 Corylus avellana HOM05D005767 ORTHO05D006785 7.1e-144 515.0 677 44.5
Psat4g100320 Pisum sativum HOM05D005767 ORTHO05D006785 7.1e-144 515.0 581 48.7
DCAR_026000 Daucus carota HOM05D005767 ORTHO05D006785 3.5e-143 512.7 589 49.4
Sabra07G0049300 Salix brachista HOM05D005767 ORTHO05D006785 2.3e-142 510.0 612 45.6
ClCG01G020330 Citrullus lanatus HOM05D005767 ORTHO05D006785 6.6e-142 508.4 648 46.5
AL7G15000 Arabidopsis lyrata HOM05D005767 ORTHO05D006785 2.1e-140 503.4 592 46.1
AUR62029469 Chenopodium quinoa HOM05D005767 ORTHO05D006785 6.2e-140 501.9 556 49.8
Solyc03g033530.4 Solanum lycopersicum HOM05D005767 ORTHO05D006785 4.0e-139 499.2 530 54.5
Migut.N01741 Erythranthe guttata HOM05D005767 ORTHO05D006785 4.4e-138 495.7 581 48.0
Rhsim10G0211700 Rhododendron simsii HOM05D005767 ORTHO05D006785 5.8e-138 495.4 588 49.5
C01p02980 Brassica napus HOM05D005767 ORTHO05D006785 7.6e-138 495.0 560 48.8
TWI73G0295 Tripterygium wilfordii HOM05D005767 ORTHO05D006785 1.4e-136 490.7 586 48.8
Os09g0536000 Oryza sativa ssp. japonica HOM05D005767 ORTHO05D006785 3.2e-136 489.6 581 46.5
Duzib147G1641 Durio zibethinus HOM05D005767 ORTHO05D006785 7.1e-136 488.4 584 47.9
Glyma.02G048200 Glycine max HOM05D005767 ORTHO05D006785 2.5e-133 479.9 598 47.3
BolC1t00284H Brassica oleracea HOM05D005767 ORTHO05D006785 9.6e-133 478.0 571 46.8
vmacro22135 Vaccinium macrocarpon HOM05D005767 ORTHO05D006785 1.6e-132 477.2 580 47.2
BcaNung00769 Brassica carinata HOM05D005767 ORTHO05D006785 3.6e-132 476.1 560 48.4
Hund16493 Selenicereus undatus HOM05D005767 ORTHO05D006785 8.1e-132 474.9 574 47.2
Phvul.003G261600 Phaseolus vulgaris HOM05D005767 ORTHO05D006785 1.1e-131 474.6 586 48.1
PGR119G2148 Punica granatum HOM05D005767 ORTHO05D006785 2.4e-131 473.4 558 45.9
GSVIVG01018776001 Vitis vinifera HOM05D005767 ORTHO05D006785 1.1e-128 464.5 323 68.4
BraA01t00254Z Brassica rapa HOM05D005767 ORTHO05D006785 1.2e-127 461.1 543 47.7
Gohir.D11G182500 Gossypium hirsutum HOM05D005767 ORTHO05D006785 1.6e-127 460.7 567 45.0
A01p02680 Brassica napus HOM05D005767 ORTHO05D006785 7.9e-127 458.4 529 47.6
Mapoly0107s0007 Marchantia polymorpha HOM05D005767 ORTHO05D006785 1.5e-125 454.1 591 42.5
SHI08521 Sapria himalayana HOM05D000565 ORTHO05D002009 3.3e-125 453.0 536 47.6
FAN26G3405 Fragaria x ananassa HOM05D005767 ORTHO05D006785 3.6e-124 449.5 572 47.2
Pp3c17_13320 Physcomitrium patens HOM05D005767 ORTHO05D006785 3.7e-116 422.9 578 41.9
unitig_32.g10945 Utricularia gibba HOM05D005767 ORTHO05D006785 3.1e-115 419.9 554 43.9
FAN26G2808 Fragaria x ananassa HOM05D005767 ORTHO05D006785 1.1e-109 401.4 352 57.7
Hma1.2p1_1115F.1_g258820 Hydrangea macrophylla HOM05D005767 ORTHO05D006785 3.3e-109 399.8 308 62.3
SMO356G0595 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 3.4e-106 389.8 526 42.4
Oeu035312.2 Olea europaea HOM05D005767 ORTHO05D006785 6.1e-103 379.0 462 45.0
Actinidia22973 Actinidia chinensis HOM05D005767 ORTHO05D006785 7.4e-93 345.5 603 40.1
AagrBONN_evm.TU.Sc2ySwM_344.3375 Anthoceros agrestis HOM05D005767 ORTHO05D006785 1.7e-81 307.8 462 40.5
Eucgr.I02343 Eucalyptus grandis HOM05D005767 ORTHO05D006785 3.2e-80 303.5 405 43.7
Lalb_Chr05g0229861 Lupinus albus HOM05D005767 ORTHO05D006785 1.8e-70 271.2 202 64.9
Lalb_Chr05g0229851 Lupinus albus HOM05D005767 ORTHO05D006785 9.8e-69 265.4 391 41.4
CBR_g18710 Chara braunii HOM05D005767 ORTHO05D006785 1.2e-55 221.9 252 45.2
SMO290G0007 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 1.4e-54 218.4 235 46.8
SEGI_12703 Sequoiadendron giganteum HOM05D005767 ORTHO05D006785 2.8e-47 194.1 189 48.7
FAN28G0764 Fragaria x ananassa HOM05D005767 ORTHO05D006785 1.2e-45 188.7 170 57.6
MCO08G331 Micromonas commoda HOM05D005767 ORTHO05D006785 1.4e-43 181.8 550 28.0
MBI09_g45348_MAGBIO Magnolia biondii HOM05D005767 ORTHO05D006785 7.8e-42 176.0 132 66.7
SMO356G0427 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 2.1e-39 167.9 403 30.5
Potri.005G113301 Populus trichocarpa HOM05D005767 ORTHO05D006785 1.9e-35 154.8 273 34.8
Lsat_1_v5_gn_9_7060 Lactuca sativa HOM05D005767 ORTHO05D006785 2.3e-33 147.9 212 42.5
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 9.5e-32 142.5 117 62.4
SMO290G0017 Selaginella moellendorffii HOM05D001672 ORTHO05D006785 9.9e-29 132.5 290 33.8
SEGI_01145 Sequoiadendron giganteum HOM05D005767 ORTHO05D006785 3.8e-28 130.6 111 60.4
SMO356G0296 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 1.3e-25 122.1 323 31.0
Cre12.g532750 Chlamydomonas reinhardtii HOM05D005767 ORTHO05D006785 5.6e-24 116.7 236 37.7
CARHR244450 Cardamine hirsuta HOM05D005767 ORTHO05D006785 2.1e-23 114.8 279 32.6
arahy.Tifrunner.gnm1.ann1.S1GY7D Arachis hypogaea HOM05D005767 ORTHO05D006785 4.0e-22 110.5 185 35.1
GSVIVG01018775001 Vitis vinifera HOM05D005767 ORTHO05D006785 4.4e-21 107.1 80 62.5
AagrBONN_evm.TU.Sc2ySwM_117.1514 Anthoceros agrestis HOM05D005767 ORTHO05D006785 1.3e-20 105.5 324 25.3
Psat7g239040 Pisum sativum HOM05D005767 ORTHO05D006785 2.9e-20 104.4 70 62.9
Cfa024213 Carpinus fangiana HOM05D005767 ORTHO05D006785 6.0e-18 96.7 248 29.0
Glyma.16G128500 Glycine max HOM05D005767 ORTHO05D006785 6.2e-15 86.7 172 32.6
MD15G1244900 Malus domestica HOM05D005767 ORTHO05D006785 2.0e-13 81.6 105 41.9
Cre12.g534151 Chlamydomonas reinhardtii HOM05D005767 ORTHO05D006785 2.9e-12 77.8 104 39.4
Cre07.g350550 Chlamydomonas reinhardtii HOM05D005767 ORTHO05D006785 1.1e-11 75.9 215 27.9
SEGI_27797 Sequoiadendron giganteum HOM05D005767 ORTHO05D006785 1.4e-11 75.5 198 35.4
MD15G1244800 Malus domestica HOM05D005767 ORTHO05D006785 2.4e-11 74.7 151 35.8
Eucgr.I02344 Eucalyptus grandis HOM05D005767 ORTHO05D006785 4.2e-11 73.9 208 33.2
AagrBONN_evm.TU.Sc2ySwM_369.93 Anthoceros agrestis HOM05D005620 ORTHO05D002193 2.1e-10 71.6 175 27.4
CBR_g48654 Chara braunii HOM05D005767 ORTHO05D006785 1.0e-09 69.3 155 29.7
arahy.Tifrunner.gnm1.ann1.JHI6E6 Arachis hypogaea HOM05D005767 ORTHO05D006785 3.9e-09 67.4 40 67.5
BolC4t28403H Brassica oleracea HOM05D005620 ORTHO05D002193 1.1e-08 65.9 165 27.3
C04p69060 Brassica napus HOM05D005620 ORTHO05D002193 1.9e-08 65.1 165 27.3
Mapoly0057s0088 Marchantia polymorpha HOM05D005620 ORTHO05D002193 1.9e-08 65.1 213 25.4
BraA04t18621Z Brassica rapa HOM05D005620 ORTHO05D002193 3.3e-08 64.3 156 26.3
A04p31630 Brassica napus HOM05D005620 ORTHO05D002193 4.3e-08 63.9 165 26.7
SEGI_05705 Sequoiadendron giganteum HOM05D005767 ORTHO05D006785 4.3e-08 63.9 84 39.3
CAN.G594.8 Capsicum annuum HOM05D005767 ORTHO05D006785 7.4e-08 63.2 79 45.6
arahy.Tifrunner.gnm1.ann1.R2J7CI Arachis hypogaea HOM05D005767 ORTHO05D006785 1.3e-07 62.4 41 58.5
Pp3c3_16930 Physcomitrium patens HOM05D005767 ORTHO05D006785 2.1e-07 61.6 181 28.2
SMO235G0003 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 1.1e-06 59.3 38 60.5
SMO356G0207 Selaginella moellendorffii HOM05D001672 ORTHO05D006785 5.3e-06 57.0 55 50.9


User provided reference genes

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