Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 1.8e-215 752.3 382 100.0
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 4.1e-122 442.2 371 63.1
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 2.6e-121 439.5 368 61.7
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 5.9e-121 438.3 352 64.8
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 7.7e-121 438.0 368 63.0
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 2.9e-120 436.0 325 67.4
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 6.5e-120 434.9 369 62.9
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 6.5e-120 434.9 370 61.9
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 1.1e-119 434.1 362 63.8
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 1.9e-119 433.3 339 66.1
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 2.5e-119 433.0 382 60.5
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 3.2e-119 432.6 371 61.7
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 3.2e-119 432.6 360 62.8
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 4.2e-119 432.2 353 64.0
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 9.4e-119 431.0 312 69.2
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 1.2e-118 430.6 365 62.5
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 4.7e-118 428.7 369 61.5
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 1.0e-117 427.6 369 61.5
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 2.3e-117 426.4 362 63.3
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 5.1e-117 425.2 349 64.2
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 6.7e-117 424.9 340 65.0
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 1.1e-116 424.1 332 65.1
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 1.5e-116 423.7 325 64.9
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 7.4e-116 421.4 349 64.5
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 1.3e-115 420.6 389 58.9
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 1.3e-115 420.6 366 61.2
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 1.7e-115 420.2 357 61.9
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 3.7e-115 419.1 321 65.7
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 4.8e-115 418.7 347 62.2
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 4.8e-115 418.7 368 60.9
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 8.2e-115 417.9 360 58.1
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 1.4e-114 417.2 387 58.7
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 1.8e-114 416.8 348 61.8
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 2.4e-114 416.4 369 59.9
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 4.1e-114 415.6 337 64.1
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 4.1e-114 415.6 305 68.9
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 5.3e-114 415.2 347 61.1
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 5.3e-114 415.2 349 62.5
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 1.2e-113 414.1 369 61.2
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 1.2e-113 414.1 363 59.5
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 2.0e-113 413.3 350 62.6
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 3.5e-113 412.5 378 57.1
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 7.7e-113 411.4 345 61.4
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 1.0e-112 411.0 388 58.5
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 1.3e-112 410.6 375 56.5
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 2.2e-112 409.8 353 60.3
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 2.9e-112 409.5 361 59.6
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 6.5e-112 408.3 366 60.7
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 1.1e-111 407.5 327 61.8
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 1.1e-111 407.5 353 59.8
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 3.2e-111 406.0 369 57.5
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 4.2e-111 405.6 316 64.6
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 5.5e-111 405.2 373 57.9
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 5.5e-111 405.2 312 65.1
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 7.2e-111 404.8 349 60.7
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 9.4e-111 404.4 364 59.9
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 1.6e-110 403.7 343 61.2
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 1.6e-110 403.7 316 64.2
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 3.6e-110 402.5 328 64.9
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 6.1e-110 401.7 354 60.7
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 1.8e-109 400.2 388 56.7
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 3.0e-109 399.4 361 59.8
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 6.7e-109 398.3 352 59.4
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 6.7e-109 398.3 370 58.6
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 1.1e-108 397.5 380 58.4
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 1.1e-108 397.5 354 60.2
Sc15g0002960 Simmondsia chinensis HOM05D002121 ORTHO05D008891 1.1e-108 397.5 317 63.4
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 2.6e-108 396.4 379 57.3
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 2.6e-108 396.4 355 60.8
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 3.3e-108 396.0 371 58.8
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 4.4e-108 395.6 380 58.2
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 5.7e-108 395.2 345 60.9
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 5.7e-108 395.2 369 58.5
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 9.7e-108 394.4 379 57.8
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 1.3e-107 394.0 355 60.3
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 1.3e-107 394.0 370 56.8
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 1.7e-107 393.7 405 53.1
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 2.8e-107 392.9 323 62.2
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 2.8e-107 392.9 323 62.2
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 4.8e-107 392.1 355 59.4
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 8.2e-107 391.3 356 59.8
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 3.1e-106 389.4 364 58.2
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 3.1e-106 389.4 374 57.5
Os02g0552600 Oryza sativa ssp. japonica HOM05D002121 ORTHO05D008891 2.0e-100 370.2 317 59.3
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 2.6e-100 369.8 356 54.8
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 2.6e-100 369.8 325 59.7
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 4.4e-100 369.0 364 54.4
Zm00001eb243580 Zea mays HOM05D002121 ORTHO05D008891 3.8e-96 355.9 381 52.2
Dinv14647 Davidia involucrata HOM05D002121 ORTHO05D008891 1.9e-95 353.6 300 61.3
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 1.6e-94 350.5 323 56.0
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 8.8e-93 344.7 335 55.5
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 1.3e-91 340.9 305 58.4
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 2.2e-91 340.1 310 60.3
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 3.1e-90 336.3 282 63.5
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 2.0e-89 333.6 258 65.5
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 7.7e-89 331.6 303 58.4
Sabra05G0136700 Salix brachista HOM05D002121 ORTHO05D008891 3.0e-85 319.7 246 65.9
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 2.1e-78 297.0 356 46.3
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 6.4e-75 285.4 356 47.8
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 8.1e-70 268.5 361 46.0
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 2.6e-68 263.5 412 40.5
GSVIVG01008832001 Vitis vinifera HOM05D002121 ORTHO05D008891 9.8e-68 261.5 191 67.5
BcaB03g12777 Brassica carinata HOM05D002121 ORTHO05D008891 5.1e-64 249.2 198 66.2
ECA246G4340 Erigeron canadensis HOM05D002121 ORTHO05D008891 7.3e-63 245.4 161 72.7
SalBow7G2694 Salvia bowleyana HOM05D002121 ORTHO05D008891 7.3e-63 245.4 170 68.8
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 6.2e-62 242.3 415 36.6
Migut.C00404 Erythranthe guttata HOM05D002121 ORTHO05D008891 3.7e-59 233.0 237 52.3
Sc15g0002990 Simmondsia chinensis HOM05D002121 ORTHO05D008891 3.4e-52 209.9 175 61.1
MBI06_g44498_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 6.4e-51 205.7 193 56.5
Oeu032210.1 Olea europaea HOM05D002121 ORTHO05D008891 7.1e-50 202.2 126 77.0
Sc15g0002970 Simmondsia chinensis HOM05D002121 ORTHO05D008891 3.0e-32 143.7 139 54.7
RcHm_v2.0_Chr2g0118881 Rosa chinensis HOM05D002121 ORTHO05D008891 1.1e-26 125.2 97 60.8
PRCOL_00001975 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 1.8e-24 117.9 250 33.6
Cfa022494 Carpinus fangiana HOM05D002121 ORTHO05D008891 4.2e-18 96.7 178 37.1
HanXRQChr15g0473481 Helianthus annuus HOM05D002121 ORTHO05D008891 1.6e-14 84.7 51 72.5
Hma1.2p1_0612F.1_g188810 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 2.4e-13 80.9 56 69.6
PRCOL_00004066 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 5.9e-12 76.3 151 31.1
CBR_g3761 Chara braunii HOM05D002121 ORTHO05D008891 2.7e-09 67.4 195 27.7
SalBow6G7050 Salvia bowleyana HOM05D007129 ORTHO05D008680 7.4e-07 59.3 103 39.8


User provided reference genes

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