Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G066 Amborella trichopoda HOM05D005824 ORTHO05D007029 0.0e+00 1155.2 592 100.0
TAR362G0448 Trochodendron aralioides HOM05D005824 ORTHO05D007029 2.9e-143 513.1 654 48.5
CiPaw.10G020000 Carya illinoinensis HOM05D005824 ORTHO05D007029 2.7e-141 506.5 659 46.6
Dinv24497 Davidia involucrata HOM05D005824 ORTHO05D007029 3.7e-138 496.1 658 44.8
CSS0029355 Camellia sinensis var. sinensis HOM05D005824 ORTHO05D007029 1.4e-137 494.2 654 45.4
MBI19_g32704_MAGBIO Magnolia biondii HOM05D005824 ORTHO05D007029 2.4e-137 493.4 715 44.2
SalBow7G3942 Salvia bowleyana HOM05D005824 ORTHO05D007029 6.9e-137 491.9 608 47.0
GSVIVG01031305001 Vitis vinifera HOM05D005824 ORTHO05D007029 6.9e-137 491.9 656 45.9
PSO339G3868 Papaver somniferum HOM05D005824 ORTHO05D007029 1.7e-135 487.3 623 46.2
PSO384G0570 Papaver somniferum HOM05D005824 ORTHO05D007029 1.7e-135 487.3 624 46.3
QL07p026733 Quercus lobata HOM05D005824 ORTHO05D007029 3.8e-135 486.1 660 44.5
Migut.B00860 Erythranthe guttata HOM05D005824 ORTHO05D007029 7.4e-131 471.9 595 45.7
PSO017G5895 Papaver somniferum HOM05D005824 ORTHO05D007029 1.3e-130 471.1 613 45.5
PSO063G2449 Papaver somniferum HOM05D005824 ORTHO05D007029 2.2e-130 470.3 588 47.6
Rhsim11G0099700 Rhododendron simsii HOM05D005824 ORTHO05D007029 2.8e-130 469.9 640 43.9
VMungo0720G2244 Vigna mungo HOM05D005824 ORTHO05D007029 2.8e-130 469.9 691 42.8
Aqoxy2G02580 Aquilegia oxysepala HOM05D005824 ORTHO05D007029 8.2e-130 468.4 658 43.5
MELO3C017799.2 Cucumis melo HOM05D005824 ORTHO05D007029 3.1e-129 466.5 670 43.9
Nn2g14227 Nelumbo nucifera HOM05D005824 ORTHO05D007029 3.1e-129 466.5 642 45.5
Cfa020078 Carpinus fangiana HOM05D005824 ORTHO05D007029 7.0e-129 465.3 660 44.4
ClCG07G011770 Citrullus lanatus HOM05D005824 ORTHO05D007029 2.6e-128 463.4 671 42.8
Thecc.09G352900 Theobroma cacao HOM05D005824 ORTHO05D007029 4.5e-128 462.6 687 43.4
CsaV3_4G002430 Cucumis sativus L. HOM05D005824 ORTHO05D007029 2.2e-127 460.3 670 43.3
Eucgr.B01798 Eucalyptus grandis HOM05D005824 ORTHO05D007029 6.5e-127 458.8 665 42.9
Oeu061927.1 Olea europaea HOM05D005824 ORTHO05D007029 6.5e-127 458.8 700 42.0
Sc09g0002470 Simmondsia chinensis HOM05D005824 ORTHO05D007029 6.5e-127 458.8 712 40.9
Potri.015G010900 Populus trichocarpa HOM05D005824 ORTHO05D007029 1.1e-126 458.0 708 40.8
Ca_11665_v3 Cicer arietinum L. HOM05D005824 ORTHO05D007029 4.2e-126 456.1 658 44.4
Cpa.g.sc48.209 Carica papaya HOM05D005824 ORTHO05D007029 9.4e-126 454.9 659 43.2
Manes.06G027100 Manihot esculenta HOM05D005824 ORTHO05D007029 1.6e-125 454.1 647 43.6
CAN.G1374.10 Capsicum annuum HOM05D005824 ORTHO05D007029 2.1e-125 453.8 657 43.1
Gohir.A03G155800 Gossypium hirsutum HOM05D005824 ORTHO05D007029 2.7e-125 453.4 688 42.0
Sopen01g044470 Solanum pennellii HOM05D005824 ORTHO05D007029 4.7e-125 452.6 655 43.1
Gorai.005G200700 Gossypium raimondii HOM05D005824 ORTHO05D007029 6.1e-125 452.2 701 42.1
EL10Ac4g09532 Beta vulgaris HOM05D005824 ORTHO05D007029 8.0e-125 451.8 728 41.1
Lj3g0001001 Lotus japonicus HOM05D005824 ORTHO05D007029 2.3e-124 450.3 709 41.2
Duzib168G0004 Durio zibethinus HOM05D005824 ORTHO05D007029 3.9e-124 449.5 593 45.0
ECA247G2466 Erigeron canadensis HOM05D005824 ORTHO05D007029 5.2e-124 449.1 645 42.9
TWI38G0226 Tripterygium wilfordii HOM05D005824 ORTHO05D007029 5.2e-124 449.1 633 43.4
COL.COLO4_11087 Corchorus olitorius HOM05D005824 ORTHO05D007029 8.8e-124 448.4 584 45.7
TPR.G12910 Trifolium pratense HOM05D005824 ORTHO05D007029 8.8e-124 448.4 700 41.9
Lj5A322T66 Lonicera japonica HOM05D005824 ORTHO05D007029 2.0e-123 447.2 636 44.8
Lj5g0026124 Lotus japonicus HOM05D005824 ORTHO05D007029 4.4e-123 446.0 706 41.1
MSTRG.15631 Avicennia marina HOM05D005824 ORTHO05D007029 7.4e-123 445.3 649 43.1
Medtr1g055080 Medicago truncatula HOM05D005824 ORTHO05D007029 2.8e-122 443.4 699 42.2
Prupe.6G306900 Prunus persica HOM05D005824 ORTHO05D007029 1.4e-121 441.0 696 41.4
AUR62006798 Chenopodium quinoa HOM05D005824 ORTHO05D007029 1.8e-121 440.7 741 39.9
Lalb_Chr02g0154321 Lupinus albus HOM05D005824 ORTHO05D007029 1.8e-121 440.7 706 40.1
CANSAT54G1845 Cannabis sativa HOM05D005824 ORTHO05D007029 4.1e-121 439.5 697 40.6
PGSC0003DMG400018251 Solanum tuberosum HOM05D005824 ORTHO05D007029 4.1e-121 439.5 659 42.8
Atru.chr12.1601 Acer truncatum HOM05D005824 ORTHO05D007029 7.0e-121 438.7 695 40.4
Psat6g118640 Pisum sativum HOM05D005824 ORTHO05D007029 2.0e-120 437.2 713 40.3
Nitab4.5_0009690g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 4.5e-120 436.0 666 40.5
Sed0007659 Sechium edule HOM05D005824 ORTHO05D007029 4.5e-120 436.0 663 41.9
Glyma.10G084300 Glycine max HOM05D005824 ORTHO05D007029 2.2e-119 433.7 694 40.5
Sabra15G0009000 Salix brachista HOM05D005824 ORTHO05D007029 2.9e-119 433.3 724 39.1
Haze_20113 Corylus avellana HOM05D005824 ORTHO05D007029 8.5e-119 431.8 715 40.4
Glyma.02G192500 Glycine max HOM05D005824 ORTHO05D007029 8.5e-119 431.8 703 39.7
AUR62000450 Chenopodium quinoa HOM05D005824 ORTHO05D007029 1.1e-118 431.4 752 39.9
vmacro01596 Vaccinium macrocarpon HOM05D005824 ORTHO05D007029 1.5e-118 431.0 638 42.0
TPR.G21237 Trifolium pratense HOM05D005824 ORTHO05D007029 2.5e-118 430.3 712 40.3
arahy.Tifrunner.gnm1.ann1.E5V6X9 Arachis hypogaea HOM05D005824 ORTHO05D007029 2.7e-117 426.8 700 39.4
arahy.Tifrunner.gnm1.ann1.S86EGP Arachis hypogaea HOM05D005824 ORTHO05D007029 2.7e-117 426.8 709 39.2
SGA_v2.0_scaffold33G13450 Striga asiatica HOM05D005824 ORTHO05D007029 1.4e-116 424.5 684 39.6
CDE01G0540 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 4.0e-116 422.9 641 40.4
Gohir.D02G178900 Gossypium hirsutum HOM05D005824 ORTHO05D007029 5.2e-116 422.5 702 40.3
THA.LOC104821746 Tarenaya hassleriana HOM05D005824 ORTHO05D007029 6.8e-116 422.2 714 40.2
Phvul.007G265900 Phaseolus vulgaris HOM05D005824 ORTHO05D007029 8.8e-116 421.8 704 39.1
Cc02_g35570 Coffea canephora HOM05D005824 ORTHO05D007029 7.5e-115 418.7 756 37.3
Duzib150G0567 Durio zibethinus HOM05D005824 ORTHO05D007029 9.8e-115 418.3 691 40.4
MD12G1202100 Malus domestica HOM05D005824 ORTHO05D007029 9.1e-113 411.8 683 39.4
Hund21844 Selenicereus undatus HOM05D005824 ORTHO05D007029 1.3e-111 407.9 785 35.5
MD04G1189300 Malus domestica HOM05D005824 ORTHO05D007029 8.5e-111 405.2 687 38.7
RcHm_v2.0_Chr3g0458051 Rosa chinensis HOM05D005824 ORTHO05D007029 4.2e-110 402.9 697 39.5
Sp2g21220 Schrenkiella parvula HOM05D005824 ORTHO05D007029 5.5e-110 402.5 724 38.0
Hma1.2p1_1243F.1_g269980 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 3.6e-109 399.8 521 45.7
FvH4_6g08180 Fragaria vesca HOM05D005824 ORTHO05D007029 3.0e-108 396.7 694 39.3
FAN14G3202 Fragaria x ananassa HOM05D005824 ORTHO05D007029 6.8e-108 395.6 694 39.2
Thhalv10003721m.g Eutrema salsugineum HOM05D005824 ORTHO05D007029 3.4e-107 393.3 718 37.7
Peaxi162Scf00357g00429 Petunia axillaris HOM05D005824 ORTHO05D007029 1.4e-105 387.9 558 44.4
CARHR186810 Cardamine hirsuta HOM05D005824 ORTHO05D007029 3.5e-104 383.3 724 36.5
Carub.0006s2449 Capsella rubella HOM05D005824 ORTHO05D007029 1.0e-103 381.7 725 36.1
Aa31LG11G9880 Aethionema arabicum HOM05D005824 ORTHO05D007029 1.3e-103 381.3 696 36.9
Nitab4.5_0000185g0360 Nicotiana tabacum HOM05D005824 ORTHO05D007029 1.3e-103 381.3 662 38.8
FAN09G3961 Fragaria x ananassa HOM05D005824 ORTHO05D007029 2.9e-103 380.2 691 38.1
DCAR_005271 Daucus carota HOM05D005824 ORTHO05D007029 1.9e-102 377.5 669 38.1
Lsat_1_v5_gn_9_78801 Lactuca sativa HOM05D005824 ORTHO05D007029 3.6e-101 373.2 605 40.3
unitig_748.g6998 Utricularia gibba HOM05D005824 ORTHO05D000260 1.8e-100 370.9 636 37.9
AT5G26760 Arabidopsis thaliana HOM05D005824 ORTHO05D007029 2.3e-100 370.5 742 34.6
HanXRQChr12g0362901 Helianthus annuus HOM05D005824 ORTHO05D007029 1.2e-99 368.2 588 40.1
Ah.10g027060 Amaranthus hybridus HOM05D005824 ORTHO05D007029 2.9e-98 363.6 761 35.1
FAN05G5613 Fragaria x ananassa HOM05D005824 ORTHO05D007029 1.6e-96 357.8 681 38.2
Os05g0134300 Oryza sativa ssp. japonica HOM05D005824 ORTHO05D007029 9.5e-94 348.6 723 36.0
AL6G38630 Arabidopsis lyrata HOM05D005824 ORTHO05D007029 8.9e-92 342.0 837 30.8
FAN02G4519 Fragaria x ananassa HOM05D005824 ORTHO05D007029 1.5e-86 324.7 671 35.6
BolC2t11924H Brassica oleracea HOM05D005824 ORTHO05D007029 5.6e-86 322.8 796 32.3
A02p39030 Brassica napus HOM05D005824 ORTHO05D007029 9.5e-86 322.0 821 30.6
BraA02t08872Z Brassica rapa HOM05D005824 ORTHO05D007029 2.8e-85 320.5 824 30.7
C02p58640 Brassica napus HOM05D005824 ORTHO05D007029 3.1e-84 317.0 793 32.3
PGR083G1123 Punica granatum HOM05D005824 ORTHO05D007029 1.1e-81 308.5 492 40.2
Nitab4.5_0002783g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 1.5e-78 298.1 643 35.3
BcaNung06222 Brassica carinata HOM05D005824 ORTHO05D007029 7.8e-72 275.8 791 30.7
Ciclev10011677m.g Citrus clementina HOM05D005824 ORTHO05D007029 5.1e-71 273.1 343 46.1
BcaNung03676 Brassica carinata HOM05D005824 ORTHO05D007029 1.6e-69 268.1 606 34.7
C07p41490 Brassica napus HOM05D005824 ORTHO05D007029 8.1e-69 265.8 617 34.7
BolC7t44682H Brassica oleracea HOM05D005824 ORTHO05D007029 7.1e-65 252.7 645 33.6
Zm00001eb354720 Zea mays HOM05D005824 ORTHO05D007029 7.1e-65 252.7 627 32.5
Mapoly0075s0015 Marchantia polymorpha HOM05D005824 ORTHO05D007029 3.9e-63 246.9 705 30.4
HPP92_021934 Vanilla planifolia HOM05D005824 ORTHO05D007029 4.3e-62 243.4 367 42.5
Actinidia35501 Actinidia chinensis HOM05D005824 ORTHO05D007029 9.6e-62 242.3 489 35.6
SEGI_20129 Sequoiadendron giganteum HOM05D005824 ORTHO05D007029 2.9e-58 230.7 402 39.8
SMO203G0090 Selaginella moellendorffii HOM05D005824 ORTHO05D007029 7.1e-57 226.1 592 30.6
Gohir.A08G201701 Gossypium hirsutum HOM05D005824 ORTHO05D007029 7.3e-54 216.1 618 32.5
AagrBONN_evm.TU.Sc2ySwM_117.2728 Anthoceros agrestis HOM05D005824 ORTHO05D007029 3.6e-53 213.8 635 28.5
Solyc01g101010.4 Solanum lycopersicum HOM05D005824 ORTHO05D007029 6.7e-47 193.0 267 42.7
SGA_v2.0_scaffold438G51629 Striga asiatica HOM05D005824 ORTHO05D007029 1.7e-42 178.3 218 44.0
Pp3c6_10400 Physcomitrium patens HOM05D005824 ORTHO05D007029 4.9e-42 176.8 184 44.6
Nitab4.5_0000185g0370 Nicotiana tabacum HOM05D005824 ORTHO05D007029 1.1e-38 165.6 162 51.9
CBR_g20185 Chara braunii HOM05D005824 ORTHO05D007029 2.8e-37 161.0 287 34.1
A06p36990 Brassica napus HOM05D005824 ORTHO05D007029 6.1e-32 143.3 162 46.9
BraA06t26625Z Brassica rapa HOM05D005824 ORTHO05D007029 6.1e-32 143.3 162 46.9
HPP92_021933 Vanilla planifolia HOM05D005824 ORTHO05D007029 6.1e-32 143.3 187 42.2
Hma1.2p1_1553F.1_g290340 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 2.0e-27 128.3 581 28.4
Oeu060660.1 Olea europaea HOM05D005824 ORTHO05D007029 4.2e-25 120.6 129 48.1
Dinv30929 Davidia involucrata HOM05D005824 ORTHO05D007029 2.8e-21 107.8 125 46.4
CDE12G0845 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 7.7e-19 99.8 118 44.1
Cfa020079 Carpinus fangiana HOM05D005824 ORTHO05D007029 5.1e-15 87.0 68 61.8
Zm00001eb056090 Zea mays HOM05D000739 ORTHO05D007029 3.3e-14 84.3 110 40.0
Zm00001eb289330 Zea mays HOM05D005824 ORTHO05D007029 2.8e-13 81.3 98 43.9
CANSAT54G0922 Cannabis sativa HOM05D005824 ORTHO05D007029 1.4e-12 79.0 161 36.0
Nitab4.5_0000185g0350 Nicotiana tabacum HOM05D005824 ORTHO05D007029 1.8e-12 78.6 105 42.9
QL03p009284 Quercus lobata HOM05D005824 ORTHO05D007029 1.5e-06 58.9 54 51.9


User provided reference genes

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