Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G020 Amborella trichopoda HOM05D005363 ORTHO05D006607 0.0e+00 1586.6 816 100.0
TAR629G3355 Trochodendron aralioides HOM05D005363 ORTHO05D006607 1.5e-294 1016.1 713 77.0
Nn1g03887 Nelumbo nucifera HOM05D005363 ORTHO05D006607 4.5e-288 994.6 716 74.6
CiPaw.11G177000 Carya illinoinensis HOM05D005363 ORTHO05D006607 2.3e-287 992.3 717 73.5
Thecc.07G070700 Theobroma cacao HOM05D005363 ORTHO05D006607 8.3e-282 973.8 717 72.0
CANSAT11G0579 Cannabis sativa HOM05D005363 ORTHO05D006607 3.2e-281 971.8 715 72.3
Manes.15G082900 Manihot esculenta HOM05D005363 ORTHO05D006607 1.7e-279 966.1 719 71.5
PSO832G2870 Papaver somniferum HOM05D005363 ORTHO05D006607 3.0e-279 965.3 723 71.6
Aqoxy1G03881 Aquilegia oxysepala HOM05D005363 ORTHO05D006607 3.9e-279 964.9 718 72.3
CSS0003917 Camellia sinensis var. sinensis HOM05D005363 ORTHO05D006607 8.6e-279 963.8 688 74.3
Duzib170G0704 Durio zibethinus HOM05D005363 ORTHO05D006607 1.5e-278 963.0 715 72.0
QL08p017669 Quercus lobata HOM05D005363 ORTHO05D006607 1.2e-277 959.9 775 67.4
PSO210G7030 Papaver somniferum HOM05D005363 ORTHO05D006607 1.0e-276 956.8 719 71.3
Ciclev10007579m.g Citrus clementina HOM05D005363 ORTHO05D006607 6.8e-276 954.1 724 70.2
Glyma.12G219100 Glycine max HOM05D005363 ORTHO05D006607 4.4e-275 951.4 712 69.9
HPP92_026561 Vanilla planifolia HOM05D005363 ORTHO05D006607 9.8e-275 950.3 716 71.2
Sc03g0009580 Simmondsia chinensis HOM05D005363 ORTHO05D006607 1.3e-274 949.9 715 70.8
Cpa.g.sc12.44 Carica papaya HOM05D005363 ORTHO05D006607 2.2e-274 949.1 706 72.5
Actinidia35283 Actinidia chinensis HOM05D005363 ORTHO05D006607 3.7e-274 948.3 719 72.5
MD11G1235900 Malus domestica HOM05D005363 ORTHO05D006607 6.4e-274 947.6 711 71.3
MSTRG.5819 Avicennia marina HOM05D005363 ORTHO05D006607 8.3e-274 947.2 721 70.2
MBI15_g19746_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 8.3e-274 947.2 678 73.3
Potri.001G407300 Populus trichocarpa HOM05D005363 ORTHO05D006607 8.3e-274 947.2 715 70.2
MD03G1218100 Malus domestica HOM05D005363 ORTHO05D006607 9.2e-273 943.7 710 70.6
COL.COLO4_09485 Corchorus olitorius HOM05D005363 ORTHO05D006607 2.3e-271 939.1 716 71.5
arahy.Tifrunner.gnm1.ann1.42XSYF Arachis hypogaea HOM05D005363 ORTHO05D006607 3.9e-271 938.3 723 69.0
RcHm_v2.0_Chr5g0036071 Rosa chinensis HOM05D005363 ORTHO05D006607 3.9e-271 938.3 710 70.1
Phvul.005G085700 Phaseolus vulgaris HOM05D005363 ORTHO05D006607 1.5e-270 936.4 712 69.4
Dinv08347 Davidia involucrata HOM05D005363 ORTHO05D006607 2.5e-270 935.6 732 69.1
HPP92_026534 Vanilla planifolia HOM05D005363 ORTHO05D006607 2.5e-270 935.6 713 70.1
arahy.Tifrunner.gnm1.ann1.3P80NP Arachis hypogaea HOM05D005363 ORTHO05D006607 5.6e-270 934.5 721 69.2
Migut.J00972 Erythranthe guttata HOM05D005363 ORTHO05D006607 5.6e-270 934.5 716 70.1
Prupe.4G191100 Prunus persica HOM05D005363 ORTHO05D006607 1.2e-269 933.3 711 68.9
Oeu009902.1 Olea europaea HOM05D005363 ORTHO05D006607 6.2e-269 931.0 731 68.9
GSVIVG01014441001 Vitis vinifera HOM05D005363 ORTHO05D006607 4.0e-268 928.3 716 69.7
HanXRQChr03g0077211 Helianthus annuus HOM05D005363 ORTHO05D006607 1.2e-267 926.8 717 68.5
Psat2g184560 Pisum sativum HOM05D005363 ORTHO05D006607 4.4e-267 924.9 712 69.0
Lalb_Chr25g0286791 Lupinus albus HOM05D005363 ORTHO05D006607 5.8e-267 924.5 711 69.5
Gorai.009G430700 Gossypium raimondii HOM05D005363 ORTHO05D006607 3.2e-265 918.7 712 68.5
Lj3g0015043 Lotus japonicus HOM05D005363 ORTHO05D006607 4.1e-265 918.3 713 68.3
PGR083G1158 Punica granatum HOM05D005363 ORTHO05D006607 2.7e-264 915.6 721 67.5
ECA240G2604 Erigeron canadensis HOM05D005363 ORTHO05D006607 7.8e-264 914.1 714 69.2
Lsat_1_v5_gn_9_95600 Lactuca sativa HOM05D005363 ORTHO05D006607 1.3e-263 913.3 721 69.6
Gohir.D05G362100 Gossypium hirsutum HOM05D005363 ORTHO05D006607 2.3e-263 912.5 712 68.3
FAN21G3123 Fragaria x ananassa HOM05D005363 ORTHO05D006607 7.3e-262 907.5 710 67.7
Medtr2g081100 Medicago truncatula HOM05D005363 ORTHO05D006607 5.2e-260 901.4 704 68.3
ClCG11G018480 Citrullus lanatus HOM05D005363 ORTHO05D006607 2.0e-259 899.4 715 67.8
vmacro09564 Vaccinium macrocarpon HOM05D005363 ORTHO05D006607 5.8e-259 897.9 676 71.6
Gohir.D01G056400 Gossypium hirsutum HOM05D005363 ORTHO05D006607 7.6e-259 897.5 714 68.8
CsaV3_3G044350 Cucumis sativus L. HOM05D005363 ORTHO05D006607 1.7e-258 896.3 723 66.7
Os04g0635900 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 2.9e-258 895.6 714 66.1
Aa31LG3G10220 Aethionema arabicum HOM05D005363 ORTHO05D006607 4.9e-258 894.8 712 68.4
AL8G29590 Arabidopsis lyrata HOM05D005363 ORTHO05D006607 4.1e-257 891.7 708 68.4
SalBow3G2312 Salvia bowleyana HOM05D005363 ORTHO05D006607 5.4e-257 891.3 708 67.7
FAN11G3021 Fragaria x ananassa HOM05D005363 ORTHO05D006607 1.2e-256 890.2 713 67.5
SGA_v2.0_scaffold13G06767 Striga asiatica HOM05D005363 ORTHO05D006607 1.2e-256 890.2 728 67.2
FvH4_3g21040 Fragaria vesca HOM05D005363 ORTHO05D006607 2.7e-256 889.0 713 67.6
EL10Ac4g08052 Beta vulgaris HOM05D005363 ORTHO05D006607 6.0e-256 887.9 747 64.0
Haze_09533 Corylus avellana HOM05D005363 ORTHO05D006607 1.0e-255 887.1 786 64.8
Zm00001eb069270 Zea mays HOM05D005363 ORTHO05D006607 1.3e-255 886.7 714 66.4
Hma1.2p1_1176F.1_g264200 Hydrangea macrophylla HOM05D005363 ORTHO05D006607 1.7e-255 886.3 733 66.7
Sabra16G0268700 Salix brachista HOM05D005363 ORTHO05D006607 6.6e-255 884.4 708 68.4
CARHR267540 Cardamine hirsuta HOM05D005363 ORTHO05D006607 1.5e-254 883.2 714 66.5
AT5G54260 Arabidopsis thaliana HOM05D005363 ORTHO05D006607 1.9e-254 882.9 714 67.8
Sp6g16300 Schrenkiella parvula HOM05D005363 ORTHO05D006607 5.6e-254 881.3 713 67.2
Sed0012869 Sechium edule HOM05D005363 ORTHO05D006607 5.6e-254 881.3 712 66.3
Carub.0008s1460 Capsella rubella HOM05D005363 ORTHO05D006607 3.6e-253 878.6 597 74.9
Thhalv10012804m.g Eutrema salsugineum HOM05D005363 ORTHO05D006607 4.7e-253 878.2 714 67.1
BcaC04g20356 Brassica carinata HOM05D005363 ORTHO05D006607 2.0e-251 872.8 629 72.0
FAN25G3415 Fragaria x ananassa HOM05D005363 ORTHO05D006607 2.6e-251 872.5 712 66.6
Hund02186 Selenicereus undatus HOM05D005363 ORTHO05D006607 1.3e-250 870.2 704 66.8
BcaB08g35781 Brassica carinata HOM05D005363 ORTHO05D006607 2.9e-250 869.0 712 66.6
Sabra16G0270900 Salix brachista HOM05D005363 ORTHO05D006607 8.4e-250 867.5 653 70.3
TPR.G32857 Trifolium pratense HOM05D005363 ORTHO05D006607 5.4e-249 864.8 724 64.5
Sopen09g004090 Solanum pennellii HOM05D005363 ORTHO05D006607 1.2e-248 863.6 558 75.6
BolC9t57330H Brassica oleracea HOM05D005363 ORTHO05D006607 1.3e-247 860.1 718 66.2
CAN.G824.3 Capsicum annuum HOM05D005363 ORTHO05D006607 1.3e-247 860.1 657 69.4
BraA10t43250Z Brassica rapa HOM05D005363 ORTHO05D006607 3.9e-247 858.6 718 66.0
THA.LOC104813315 Tarenaya hassleriana HOM05D005363 ORTHO05D006607 1.9e-246 856.3 494 82.8
SHI33827 Sapria himalayana HOM05D005363 ORTHO05D006607 1.6e-245 853.2 711 62.4
Cc06_g05460 Coffea canephora HOM05D005363 ORTHO05D006607 3.6e-245 852.0 487 82.8
RhsimUnG0258300 Rhododendron simsii HOM05D005363 ORTHO05D006607 1.1e-244 850.5 664 67.6
C09p44570 Brassica napus HOM05D005363 ORTHO05D006607 9.0e-244 847.4 643 69.5
A10p11550 Brassica napus HOM05D005363 ORTHO05D006607 1.5e-243 846.7 645 69.3
DCAR_018424 Daucus carota HOM05D005363 ORTHO05D006607 9.9e-243 844.0 650 70.2
Peaxi162Scf00290g00111 Petunia axillaris HOM05D005363 ORTHO05D006607 9.9e-243 844.0 626 71.2
unitig_8.g4146 Utricularia gibba HOM05D005363 ORTHO05D006607 1.1e-241 840.5 721 62.4
Lj8C160T16 Lonicera japonica HOM05D005363 ORTHO05D006607 9.3e-241 837.4 724 65.9
Gorai.002G076500 Gossypium raimondii HOM05D005363 ORTHO05D006607 1.2e-240 837.0 718 65.5
VMungo1080G1535 Vigna mungo HOM05D005363 ORTHO05D006607 9.6e-230 800.8 461 81.1
Gohir.A04G025700 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.2e-227 793.9 728 61.8
MELO3C018187.2 Cucumis melo HOM05D005363 ORTHO05D006607 1.4e-225 786.9 723 61.7
Mapoly0023s0117 Marchantia polymorpha HOM05D005363 ORTHO05D006607 7.9e-224 781.2 733 60.0
AUR62029306 Chenopodium quinoa HOM05D005363 ORTHO05D006607 2.3e-223 779.6 786 56.0
AUR62015595 Chenopodium quinoa HOM05D005363 ORTHO05D006607 3.1e-220 769.2 513 73.1
Pp3c24_2350 Physcomitrium patens HOM05D005363 ORTHO05D006607 2.3e-215 753.1 599 64.1
Gohir.A04G026000 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.1e-212 744.2 628 64.5
AagrBONN_evm.TU.Sc2ySwM_117.2240 Anthoceros agrestis HOM05D005363 ORTHO05D006607 2.9e-210 736.1 715 58.6
FAN16G0276 Fragaria x ananassa HOM05D005363 ORTHO05D006607 1.1e-204 717.6 722 57.9
SMO347G0170 Selaginella moellendorffii HOM05D005363 ORTHO05D006607 2.5e-201 706.4 488 69.5
CDE12G0672 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 6.1e-192 675.2 395 80.8
CBR_g48040 Chara braunii HOM05D005363 ORTHO05D006607 9.5e-177 624.8 532 59.2
Atru.chr2.2913 Acer truncatum HOM05D005363 ORTHO05D006607 1.8e-172 610.5 325 86.2
Zm00001eb171920 Zea mays HOM05D005363 ORTHO05D006607 3.5e-171 606.3 469 61.4
Os08g0177600 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 1.2e-166 591.3 516 56.8
Nitab4.5_0001969g0080 Nicotiana tabacum HOM05D005363 ORTHO05D006607 6.6e-162 575.5 680 53.8
Ca_01813_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 5.0e-154 549.3 351 74.1
Eucgr.F01076 Eucalyptus grandis HOM05D005363 ORTHO05D006607 3.3e-153 546.6 550 58.7
Nitab4.5_0007366g0050 Nicotiana tabacum HOM05D005363 ORTHO05D006607 1.5e-137 494.6 528 55.7
Cre12.g556911 Chlamydomonas reinhardtii HOM05D005363 ORTHO05D006607 2.3e-130 470.7 530 48.5
SEGI_22122 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 2.1e-120 437.6 257 79.4
MCO13G379 Micromonas commoda HOM05D005363 ORTHO05D006607 1.4e-119 434.9 561 44.7
unitig_13.g31430 Utricularia gibba HOM05D005363 ORTHO05D006607 6.4e-117 426.0 487 51.3
PRCOL_00003292 Prasinoderma coloniale HOM05D005363 ORTHO05D006607 1.3e-101 375.2 712 37.2
Nitab4.5_0007366g0060 Nicotiana tabacum HOM05D005363 ORTHO05D006607 1.5e-97 361.7 210 81.9
Cfa025591 Carpinus fangiana HOM05D005363 ORTHO05D006607 1.4e-95 355.1 569 37.4
PGSC0003DMG400002669 Solanum tuberosum HOM05D005363 ORTHO05D006607 3.9e-90 337.0 179 87.7
CAN.G397.4 Capsicum annuum HOM05D005363 ORTHO05D006607 8.0e-83 312.8 264 61.0
Atru.chr2.2912 Acer truncatum HOM05D005363 ORTHO05D006607 2.0e-81 308.1 394 54.1
MBI09_g27609_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 2.7e-70 271.2 157 77.1
Eucgr.C01186 Eucalyptus grandis HOM05D005363 ORTHO05D006607 7.2e-60 236.5 367 51.0
CDE12G0487 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 1.2e-59 235.7 312 51.6
CDE12G0057 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 4.0e-58 230.7 172 65.7
SEGI_35588 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 4.7e-51 207.2 291 49.1
SEGI_32923 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 4.6e-38 164.1 113 69.9
Ca_01800_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 1.0e-29 136.3 275 41.5
Ca_30473_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 1.0e-29 136.3 235 43.8
GSVIVG01001519001 Vitis vinifera HOM05D005363 ORTHO05D006607 5.1e-29 134.0 96 70.8
CDE12G0011 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 1.2e-27 129.4 76 85.5
Cc06_g05450 Coffea canephora HOM05D005363 ORTHO05D006607 1.3e-13 82.8 227 44.1
arahy.Tifrunner.gnm1.ann1.Q8WXS4 Arachis hypogaea HOM05D005363 ORTHO05D006607 6.2e-11 73.9 117 40.2
THA.LOC104811844 Tarenaya hassleriana HOM05D005363 ORTHO05D006607 8.1e-11 73.6 198 41.4


User provided reference genes

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