Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 7.0e-206 720.3 344 100.0
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 9.9e-152 540.4 317 80.1
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 4.2e-150 535.0 314 79.6
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 3.5e-149 531.9 321 75.7
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 6.0e-149 531.2 317 75.7
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 1.3e-148 530.0 311 77.8
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 5.1e-148 528.1 316 76.9
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 1.5e-147 526.6 318 76.1
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 2.5e-147 525.8 316 76.6
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 4.3e-147 525.0 312 77.9
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 1.6e-146 523.1 317 75.4
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 6.2e-146 521.2 316 76.3
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 6.2e-146 521.2 317 75.7
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 1.4e-145 520.0 317 74.4
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 5.3e-145 518.1 320 74.7
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 2.0e-144 516.2 317 74.4
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 2.0e-144 516.2 324 73.8
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 2.0e-144 516.2 327 73.1
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 2.6e-144 515.8 317 74.8
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 3.4e-144 515.4 314 74.5
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 3.4e-144 515.4 317 74.8
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 7.6e-144 514.2 326 72.7
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 9.9e-144 513.8 316 74.4
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 1.3e-143 513.5 314 75.5
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 1.7e-143 513.1 312 75.0
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 2.9e-143 512.3 327 72.5
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 3.8e-143 511.9 327 72.5
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 3.8e-143 511.9 316 75.0
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 3.8e-143 511.9 317 73.8
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 3.8e-143 511.9 314 74.5
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 8.4e-143 510.8 317 73.5
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 8.4e-143 510.8 317 75.4
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 8.4e-143 510.8 314 74.2
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 1.9e-142 509.6 324 73.5
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 1.9e-142 509.6 318 73.9
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 2.4e-142 509.2 316 73.4
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 2.4e-142 509.2 321 73.2
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 2.4e-142 509.2 318 74.2
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 4.2e-142 508.4 319 73.0
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 4.2e-142 508.4 317 74.1
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 4.2e-142 508.4 321 73.8
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 5.4e-142 508.1 321 73.5
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 7.1e-142 507.7 321 73.2
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 9.3e-142 507.3 315 74.0
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 1.6e-141 506.5 317 73.8
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 1.6e-141 506.5 321 72.9
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 2.1e-141 506.1 316 73.7
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 2.1e-141 506.1 314 73.2
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 2.7e-141 505.8 314 73.2
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 2.7e-141 505.8 317 73.5
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 3.5e-141 505.4 316 73.1
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 3.5e-141 505.4 316 73.4
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 6.0e-141 504.6 317 73.5
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 7.9e-141 504.2 317 74.1
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 1.3e-140 503.4 316 72.8
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 2.3e-140 502.7 313 72.8
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 3.0e-140 502.3 313 72.2
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 3.9e-140 501.9 321 72.9
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 5.1e-140 501.5 314 72.6
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 5.1e-140 501.5 314 72.6
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 5.1e-140 501.5 314 72.6
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 5.1e-140 501.5 317 74.1
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 8.7e-140 500.7 313 73.5
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 8.7e-140 500.7 313 73.5
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 8.7e-140 500.7 318 72.0
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 1.1e-139 500.4 317 72.6
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 1.5e-139 500.0 313 74.8
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 1.5e-139 500.0 320 72.2
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 1.9e-139 499.6 314 73.6
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 1.9e-139 499.6 309 73.5
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 3.6e-138 495.4 316 71.8
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 1.1e-137 493.8 317 71.6
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 1.1e-137 493.8 314 72.9
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 3.1e-137 492.3 313 72.8
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 4.0e-137 491.9 312 72.8
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 4.0e-137 491.9 313 72.8
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 5.3e-137 491.5 315 72.4
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 1.5e-136 490.0 314 71.7
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 1.5e-136 490.0 314 71.7
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 2.6e-136 489.2 316 71.2
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 4.5e-136 488.4 313 71.9
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 4.5e-136 488.4 313 71.9
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 5.8e-136 488.0 313 71.9
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 9.9e-136 487.3 314 71.0
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 2.2e-135 486.1 312 71.8
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 2.2e-135 486.1 312 71.8
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 4.9e-135 485.0 315 69.5
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 1.1e-134 483.8 314 70.7
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 1.1e-134 483.8 315 70.8
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 3.2e-134 482.3 342 67.5
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 5.4e-134 481.5 310 71.3
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 3.5e-133 478.8 313 70.0
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 7.9e-133 477.6 313 69.3
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 1.8e-132 476.5 320 68.4
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 8.7e-132 474.2 313 68.7
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 4.2e-126 455.3 272 79.4
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 1.8e-124 449.9 283 74.2
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 1.9e-123 446.4 317 64.7
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 2.0e-120 436.4 276 74.3
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 2.0e-120 436.4 315 61.9
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 4.5e-120 435.3 272 75.4
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 1.3e-119 433.7 271 74.9
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 1.7e-119 433.3 275 74.2
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 5.0e-119 431.8 286 72.0
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 6.5e-119 431.4 281 72.6
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 6.1e-117 424.9 263 76.0
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 8.7e-116 421.0 295 69.5
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 2.4e-113 412.9 265 72.1
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 2.3e-108 396.4 279 69.2
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 5.9e-104 381.7 273 64.1
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 5.3e-89 332.0 231 68.0
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 4.5e-88 328.9 331 48.9
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 7.5e-83 311.6 271 58.3
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 1.6e-80 303.9 337 46.0
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 3.6e-77 292.7 184 74.5
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 1.8e-65 253.8 319 41.4
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 2.3e-63 246.9 328 40.9
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 2.2e-58 230.3 150 73.3
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 1.7e-55 220.7 369 34.7
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 2.4e-49 200.3 317 38.8
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 8.1e-29 132.1 79 72.2
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 3.9e-23 113.2 74 64.9
Lj1A682T15 Lonicera japonica HOM05D006124 ORTHO05D007854 7.4e-14 82.4 46 71.7
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 5.3e-12 76.3 133 33.1
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 2.2e-10 70.9 88 46.6
RcHm_v2.0_Chr5g0060231 Rosa chinensis HOM05D006124 ORTHO05D007854 4.6e-08 63.2 45 64.4


User provided reference genes

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