Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0022G031 Amborella trichopoda HOM05D005334 ORTHO05D006560 1.3e-94 349.7 175 100.0
ATR1153G009 Amborella trichopoda HOM05D005334 ORTHO05D006560 1.1e-58 230.3 138 89.1
PSO832G1169 Papaver somniferum HOM05D005334 ORTHO05D006560 2.5e-42 176.0 146 63.7
Nn5g29815 Nelumbo nucifera HOM05D005334 ORTHO05D006560 5.6e-42 174.9 141 65.2
QL06p036434 Quercus lobata HOM05D005334 ORTHO05D006560 5.6e-42 174.9 139 65.5
PSO013G0112 Papaver somniferum HOM05D005334 ORTHO05D006560 7.2e-42 174.5 146 63.0
PSO761G0425 Papaver somniferum HOM05D005334 ORTHO05D006560 1.2e-41 173.7 146 63.0
PSO700G0130 Papaver somniferum HOM05D005334 ORTHO05D006560 4.7e-41 171.8 146 61.6
Cfa006855 Carpinus fangiana HOM05D005334 ORTHO05D006560 1.8e-40 169.9 141 63.8
Os06g0639600 Oryza sativa ssp. japonica HOM05D005334 ORTHO05D006560 2.3e-40 169.5 141 65.2
TAR625G0036 Trochodendron aralioides HOM05D005334 ORTHO05D006560 4.0e-40 168.7 122 70.5
Haze_03908 Corylus avellana HOM05D005334 ORTHO05D006560 8.9e-40 167.5 133 65.4
Hma1.2p1_0964F.1_g242010 Hydrangea macrophylla HOM05D005334 ORTHO05D006560 2.0e-39 166.4 141 63.8
Ciclev10008278m.g Citrus clementina HOM05D005334 ORTHO05D006560 5.7e-39 164.9 141 63.8
Rhsim04G0113300 Rhododendron simsii HOM05D005334 ORTHO05D006560 1.3e-38 163.7 141 62.4
CsaV3_6G044840 Cucumis sativus L. HOM05D005334 ORTHO05D006560 2.9e-38 162.5 141 61.7
ECA233G4415 Erigeron canadensis HOM05D005334 ORTHO05D006560 2.9e-38 162.5 142 64.1
Sabra10G0146100 Salix brachista HOM05D005334 ORTHO05D006560 2.9e-38 162.5 150 58.0
Thecc.10G018300 Theobroma cacao HOM05D005334 ORTHO05D006560 2.9e-38 162.5 141 61.7
Duzib128G0185 Durio zibethinus HOM05D005334 ORTHO05D006560 3.7e-38 162.2 141 61.7
FvH4_1g19290 Fragaria vesca HOM05D005334 ORTHO05D006560 3.7e-38 162.2 141 61.7
FvH4_7g07230 Fragaria vesca HOM05D005334 ORTHO05D006560 3.7e-38 162.2 141 61.0
FAN19G2596 Fragaria x ananassa HOM05D005334 ORTHO05D006560 3.7e-38 162.2 141 61.7
Potri.010G189500 Populus trichocarpa HOM05D005334 ORTHO05D006560 3.7e-38 162.2 150 59.3
RcHm_v2.0_Chr6g0270401 Rosa chinensis HOM05D005334 ORTHO05D006560 3.7e-38 162.2 141 61.0
COL.COLO4_25710 Corchorus olitorius HOM05D005334 ORTHO05D006560 4.9e-38 161.8 141 61.0
Nitab4.5_0000402g0140 Nicotiana tabacum HOM05D005334 ORTHO05D006560 6.4e-38 161.4 141 61.0
RcHm_v2.0_Chr6g0270301 Rosa chinensis HOM05D005334 ORTHO05D006560 6.4e-38 161.4 141 61.0
CAN.G1813.2 Capsicum annuum HOM05D005334 ORTHO05D006560 8.3e-38 161.0 141 62.4
Peaxi162Scf00085g00115 Petunia axillaris HOM05D005334 ORTHO05D006560 8.3e-38 161.0 141 61.7
Zm00001eb387250 Zea mays HOM05D005334 ORTHO05D006560 8.3e-38 161.0 131 64.9
FAN26G1496 Fragaria x ananassa HOM05D005334 ORTHO05D006560 1.1e-37 160.6 141 61.0
Sopen11g005690 Solanum pennellii HOM05D005334 ORTHO05D006560 1.1e-37 160.6 141 61.7
PGSC0003DMG400016186 Solanum tuberosum HOM05D005334 ORTHO05D006560 1.1e-37 160.6 141 61.7
Actinidia05483 Actinidia chinensis HOM05D005334 ORTHO05D006560 1.8e-37 159.8 141 61.7
Solyc11g010950.2 Solanum lycopersicum HOM05D005334 ORTHO05D006560 1.8e-37 159.8 141 61.7
Ciclev10008715m.g Citrus clementina HOM05D005334 ORTHO05D006560 2.4e-37 159.5 140 62.9
HanXRQChr08g0226671 Helianthus annuus HOM05D005334 ORTHO05D006560 2.4e-37 159.5 138 63.0
MD01G1042400 Malus domestica HOM05D005334 ORTHO05D006560 2.4e-37 159.5 141 60.3
ClCG01G018260 Citrullus lanatus HOM05D005334 ORTHO05D006560 3.2e-37 159.1 141 60.3
Medtr8g007340 Medicago truncatula HOM05D005334 ORTHO05D006560 4.1e-37 158.7 141 64.5
GSVIVG01003946001 Vitis vinifera HOM05D005334 ORTHO05D006560 4.1e-37 158.7 141 61.0
Ca_14799_v3 Cicer arietinum L. HOM05D005334 ORTHO05D006560 5.4e-37 158.3 141 63.8
Sed0026061 Sechium edule HOM05D005334 ORTHO05D006560 5.4e-37 158.3 134 62.7
TWI34G1275 Tripterygium wilfordii HOM05D005334 ORTHO05D006560 7.0e-37 157.9 134 62.7
Gohir.D12G076300 Gossypium hirsutum HOM05D005334 ORTHO05D006560 9.2e-37 157.5 141 61.0
Sc03g0000510 Simmondsia chinensis HOM05D005334 ORTHO05D006560 9.2e-37 157.5 141 60.3
Gorai.008G084700 Gossypium raimondii HOM05D005334 ORTHO05D006560 1.2e-36 157.1 141 60.3
FAN23G0357 Fragaria x ananassa HOM05D005334 ORTHO05D006560 1.6e-36 156.8 141 60.3
FAN23G0783 Fragaria x ananassa HOM05D005334 ORTHO05D006560 1.6e-36 156.8 141 60.3
SEGI_17743 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 1.6e-36 156.8 144 58.3
Lsat_1_v5_gn_6_15620 Lactuca sativa HOM05D005334 ORTHO05D006560 2.0e-36 156.4 141 61.7
Psat4g223080 Pisum sativum HOM05D005334 ORTHO05D006560 2.0e-36 156.4 141 61.7
TPR.G5292 Trifolium pratense HOM05D005334 ORTHO05D006560 2.0e-36 156.4 141 62.4
CANSAT01G0836 Cannabis sativa HOM05D005334 ORTHO05D006560 2.7e-36 156.0 141 61.7
CiPaw.07G044700 Carya illinoinensis HOM05D005334 ORTHO05D006560 2.7e-36 156.0 136 61.0
Lalb_Chr12g0210501 Lupinus albus HOM05D005334 ORTHO05D006560 2.7e-36 156.0 141 61.7
SGA_v2.0_scaffold45G17221 Striga asiatica HOM05D005334 ORTHO05D006560 2.7e-36 156.0 141 59.6
CiPaw.07G045200 Carya illinoinensis HOM05D005334 ORTHO05D006560 3.5e-36 155.6 133 61.7
MELO3C007703.2 Cucumis melo HOM05D005334 ORTHO05D006560 3.5e-36 155.6 145 58.6
Phvul.010G045900 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 3.5e-36 155.6 141 61.0
Phvul.010G046100 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 3.5e-36 155.6 141 61.0
FAN03G2380 Fragaria x ananassa HOM05D005334 ORTHO05D006560 4.6e-36 155.2 144 57.6
vmacro09003 Vaccinium macrocarpon HOM05D005334 ORTHO05D006560 7.8e-36 154.5 138 60.9
Aqoxy6G01573 Aquilegia oxysepala HOM05D005334 ORTHO05D006560 1.0e-35 154.1 132 60.6
Migut.K00814 Erythranthe guttata HOM05D005334 ORTHO05D006560 1.0e-35 154.1 155 57.4
Glyma.13G008300 Glycine max HOM05D005334 ORTHO05D006560 1.7e-35 153.3 141 61.0
THA.LOC104816551 Tarenaya hassleriana HOM05D005334 ORTHO05D006560 1.7e-35 153.3 141 61.7
Cpa.g.sc19.179 Carica papaya HOM05D005334 ORTHO05D006560 5.0e-35 151.8 141 59.6
CDE04G2384 Ceratophyllum demersum HOM05D005334 ORTHO05D006560 5.0e-35 151.8 133 61.7
PGR031G2068 Punica granatum HOM05D005334 ORTHO05D006560 5.0e-35 151.8 136 60.3
Prupe.1G076500 Prunus persica HOM05D005334 ORTHO05D006560 6.6e-35 151.4 150 55.3
MBI10_g34777_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 8.6e-35 151.0 171 50.9
SalBow5G3116 Salvia bowleyana HOM05D005334 ORTHO05D006560 8.6e-35 151.0 133 59.4
SalBow5G4670 Salvia bowleyana HOM05D005334 ORTHO05D006560 8.6e-35 151.0 133 59.4
arahy.Tifrunner.gnm1.ann1.DY9T0P Arachis hypogaea HOM05D005334 ORTHO05D006560 1.1e-34 150.6 141 60.3
Cc07_g13790 Coffea canephora HOM05D005334 ORTHO05D006560 1.1e-34 150.6 142 59.9
Eucgr.A00094 Eucalyptus grandis HOM05D005334 ORTHO05D006560 1.1e-34 150.6 141 59.6
Lj3g0001207 Lotus japonicus HOM05D005334 ORTHO05D006560 1.1e-34 150.6 142 59.2
VMungo0331G1245 Vigna mungo HOM05D005334 ORTHO05D006560 1.1e-34 150.6 148 58.1
Lj2g0000099 Lotus japonicus HOM05D005334 ORTHO05D006560 1.9e-34 149.8 142 58.5
arahy.Tifrunner.gnm1.ann1.D5QNLH Arachis hypogaea HOM05D005334 ORTHO05D006560 3.3e-34 149.1 141 59.6
CiPaw.07G045000 Carya illinoinensis HOM05D005334 ORTHO05D006560 7.3e-34 147.9 136 60.3
Gohir.A12G078265 Gossypium hirsutum HOM05D005334 ORTHO05D006560 7.3e-34 147.9 141 58.9
CSS0046374 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 9.5e-34 147.5 120 66.7
Manes.10G013400 Manihot esculenta HOM05D005334 ORTHO05D006560 9.5e-34 147.5 141 57.4
Atru.chr12.1050 Acer truncatum HOM05D005334 ORTHO05D006560 1.2e-33 147.1 159 56.0
MSTRG.3723 Avicennia marina HOM05D005334 ORTHO05D006560 2.1e-33 146.4 141 56.7
Lj2C525G9 Lonicera japonica HOM05D005334 ORTHO05D006560 2.1e-33 146.4 133 63.9
unitig_0.g2648 Utricularia gibba HOM05D005334 ORTHO05D006560 3.6e-33 145.6 139 56.8
AUR62003692 Chenopodium quinoa HOM05D005334 ORTHO05D006560 8.0e-33 144.4 148 54.7
CSS0016906 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 2.3e-32 142.9 120 65.0
Carub.0003s1053 Capsella rubella HOM05D005334 ORTHO05D006560 2.0e-31 139.8 139 58.3
Thhalv10021017m.g Eutrema salsugineum HOM05D005334 ORTHO05D006560 5.8e-31 138.3 139 56.8
BcaC05g29390 Brassica carinata HOM05D005334 ORTHO05D006560 7.5e-31 137.9 139 57.6
A05p38080 Brassica napus HOM05D005334 ORTHO05D006560 7.5e-31 137.9 139 56.8
C05p56870 Brassica napus HOM05D005334 ORTHO05D006560 7.5e-31 137.9 139 57.6
BolC5t34351H Brassica oleracea HOM05D005334 ORTHO05D006560 7.5e-31 137.9 139 57.6
CARHR085780 Cardamine hirsuta HOM05D005334 ORTHO05D006560 7.5e-31 137.9 139 56.8
BraA05t22600Z Brassica rapa HOM05D005334 ORTHO05D006560 1.3e-30 137.1 139 57.6
CSS0002721 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 1.7e-30 136.7 114 61.4
BcaB06g25638 Brassica carinata HOM05D005334 ORTHO05D006560 4.9e-30 135.2 132 58.3
AUR62018003 Chenopodium quinoa HOM05D005334 ORTHO05D006560 6.4e-30 134.8 171 47.4
SHI03443 Sapria himalayana HOM05D005334 ORTHO05D006560 6.4e-30 134.8 133 55.6
Aa31LG3G4530 Aethionema arabicum HOM05D005334 ORTHO05D006560 8.3e-30 134.4 133 56.4
Sp3g09500 Schrenkiella parvula HOM05D005334 ORTHO05D006560 1.1e-29 134.0 139 56.1
AT3G11220 Arabidopsis thaliana HOM05D005334 ORTHO05D006560 2.4e-29 132.9 133 57.9
CiPaw.07G049700 Carya illinoinensis HOM05D005334 ORTHO05D006560 6.0e-28 128.3 133 54.1
AagrBONN_evm.TU.Sc2ySwM_117.1770 Anthoceros agrestis HOM05D005334 ORTHO05D006560 1.3e-27 127.1 134 50.0
AL3G22740 Arabidopsis lyrata HOM05D005334 ORTHO05D006560 3.0e-27 125.9 140 55.0
Mapoly0006s0234 Marchantia polymorpha HOM05D005334 ORTHO05D006560 3.6e-25 119.0 134 44.8
CSS0017464 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 1.8e-24 116.7 120 58.3
DCAR_003438 Daucus carota HOM05D005334 ORTHO05D006560 1.5e-23 113.6 94 60.6
Pp3c9_23940 Physcomitrium patens HOM05D005334 ORTHO05D006560 1.5e-23 113.6 147 40.8
RcHm_v2.0_Chr2g0110581 Rosa chinensis HOM05D005334 ORTHO05D006560 4.4e-23 112.1 86 64.0
MBI03_g45376_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 9.2e-21 104.4 85 64.7
CSS0026696 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 3.0e-19 99.4 85 63.5
MBI03_g46739_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 1.9e-18 96.7 79 63.3
Hund14075 Selenicereus undatus HOM05D005334 ORTHO05D006560 7.3e-18 94.7 87 57.5
HPP92_008021 Vanilla planifolia HOM05D005334 ORTHO05D006560 1.6e-17 93.6 79 60.8
MD01G1042700 Malus domestica HOM05D005334 ORTHO05D006560 2.1e-17 93.2 141 44.7
Glyma.03G108600 Glycine max HOM05D005334 ORTHO05D006560 1.5e-15 87.0 79 57.0
Ah.02g123390 Amaranthus hybridus HOM05D005334 ORTHO05D006560 2.0e-15 86.7 141 42.6
Dinv27014 Davidia involucrata HOM05D005334 ORTHO05D006560 9.2e-13 77.8 54 77.8
Prupe.6G206700 Prunus persica HOM05D005334 ORTHO05D006560 7.8e-12 74.7 85 51.8
Thecc.09G278800 Theobroma cacao HOM05D005334 ORTHO05D006560 6.6e-11 71.6 54 70.4
Dinv36960 Davidia involucrata HOM05D005334 ORTHO05D006560 2.5e-10 69.7 54 70.4
SMO146G0066 Selaginella moellendorffii HOM05D005334 ORTHO05D006560 3.6e-09 65.9 86 41.9
CBR_g30786 Chara braunii HOM05D000019 ORTHO05D000002 6.2e-09 65.1 104 33.7


User provided reference genes

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