Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G17040 Arabidopsis thaliana HOM05D006900 ORTHO05D008651 4.5e-144 515.4 273 100.0
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 2.2e-130 469.9 274 93.1
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 5.4e-121 438.7 274 88.7
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 3.3e-118 429.5 274 86.5
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 5.2e-116 422.2 274 86.5
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 2.0e-115 420.2 274 86.5
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 6.0e-104 382.1 284 73.2
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 4.2e-97 359.4 274 77.0
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 7.1e-97 358.6 274 77.0
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 1.6e-96 357.5 274 77.0
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 4.6e-96 355.9 273 75.8
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 4.6e-96 355.9 273 75.8
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 5.1e-95 352.4 271 76.4
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 7.9e-88 328.6 274 66.8
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 3.6e-64 250.0 269 51.7
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 3.0e-63 246.9 274 53.3
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 3.0e-63 246.9 277 53.8
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 6.7e-63 245.7 190 65.3
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 1.9e-62 244.2 233 55.8
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 4.3e-62 243.0 278 52.2
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 7.4e-62 242.3 274 52.9
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 7.4e-62 242.3 286 51.0
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 1.7e-61 241.1 192 65.1
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 3.7e-61 240.0 281 52.3
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 4.8e-61 239.6 225 58.7
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 4.8e-61 239.6 275 52.0
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 4.8e-61 239.6 282 52.8
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 6.3e-61 239.2 266 51.5
CDE01G0483 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 6.3e-61 239.2 199 61.3
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 6.3e-61 239.2 275 52.0
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 6.3e-61 239.2 263 52.5
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 1.4e-60 238.0 261 52.9
Ca_21442_v3 Cicer arietinum L. HOM05D006900 ORTHO05D008651 4.1e-60 236.5 270 51.5
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 5.3e-60 236.1 261 52.9
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 6.9e-60 235.7 196 61.2
Hma1.2p1_0013F.1_g008580 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 9.1e-60 235.3 239 55.6
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 1.2e-59 235.0 268 51.5
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 1.2e-59 235.0 278 53.2
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 2.0e-59 234.2 280 51.1
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 3.4e-59 233.4 268 50.0
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 3.4e-59 233.4 192 62.0
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 3.4e-59 233.4 201 60.2
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 4.5e-59 233.0 187 64.2
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 5.9e-59 232.6 269 49.1
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 7.7e-59 232.3 289 50.9
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 1.3e-58 231.5 189 61.9
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 2.2e-58 230.7 210 60.0
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 2.2e-58 230.7 249 51.0
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 2.2e-58 230.7 206 58.7
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 2.2e-58 230.7 289 50.5
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 3.8e-58 229.9 297 50.5
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 6.5e-58 229.2 212 58.5
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 8.5e-58 228.8 259 51.7
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 1.9e-57 227.6 219 59.4
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 1.9e-57 227.6 208 56.7
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 1.9e-57 227.6 214 57.5
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 2.5e-57 227.3 211 57.8
DCAR_030472 Daucus carota HOM05D006900 ORTHO05D008651 3.2e-57 226.9 267 50.2
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 4.2e-57 226.5 270 51.1
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 4.2e-57 226.5 288 50.0
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 9.4e-57 225.3 249 50.2
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 9.4e-57 225.3 225 55.6
SalBow8G4068 Salvia bowleyana HOM05D006900 ORTHO05D008651 9.4e-57 225.3 211 56.4
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 1.2e-56 224.9 275 50.5
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 1.6e-56 224.6 224 55.4
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 2.7e-56 223.8 198 58.6
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 2.7e-56 223.8 158 69.6
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 2.7e-56 223.8 297 47.5
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 3.6e-56 223.4 187 60.4
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 3.6e-56 223.4 269 49.8
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 3.6e-56 223.4 268 49.6
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 7.9e-56 222.2 266 49.6
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 1.4e-55 221.5 271 49.1
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 1.4e-55 221.5 170 64.7
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 1.8e-55 221.1 274 47.4
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 3.0e-55 220.3 267 49.1
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 3.0e-55 220.3 206 56.3
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 6.7e-55 219.2 147 70.7
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 1.1e-54 218.4 148 69.6
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 2.0e-54 217.6 248 49.6
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 2.0e-54 217.6 279 47.7
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 9.7e-54 215.3 265 48.3
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 9.7e-54 215.3 265 48.3
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 1.3e-53 214.9 265 49.1
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 1.7e-53 214.5 160 65.6
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 2.2e-53 214.2 212 53.8
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 2.8e-53 213.8 179 60.9
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 2.4e-52 210.7 286 45.8
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 3.1e-52 210.3 148 64.2
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 3.4e-51 206.8 291 45.4
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 5.9e-51 206.1 148 65.5
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 1.3e-50 204.9 148 64.9
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 2.2e-50 204.1 174 57.5
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 3.8e-50 203.4 280 43.9
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 3.2e-49 200.3 148 62.8
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 7.2e-49 199.1 164 57.9
Os03g0308800 Oryza sativa ssp. japonica HOM05D006900 ORTHO05D008651 3.6e-48 196.8 158 58.9
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 2.2e-45 187.6 184 50.0
SEGI_12330 Sequoiadendron giganteum HOM05D006900 ORTHO05D008651 3.7e-37 160.2 111 63.1
CANSAT78G0722 Cannabis sativa HOM05D006900 ORTHO05D008651 2.4e-36 157.5 265 40.4
Mapoly0078s0010 Marchantia polymorpha HOM05D006900 ORTHO05D008651 1.2e-35 155.2 110 62.7
AagrBONN_evm.TU.Sc2ySwM_368.516 Anthoceros agrestis HOM05D006900 ORTHO05D008651 4.2e-33 146.7 110 62.7
Pp3c1_20310 Physcomitrium patens HOM05D006900 ORTHO05D008651 6.8e-31 139.4 115 55.7
SMO115G0152 Selaginella moellendorffii HOM05D006900 ORTHO05D008651 9.8e-30 135.6 110 62.7
CSS0028196 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 9.1e-28 129.0 80 77.5
Gohir.A10G171950 Gossypium hirsutum HOM05D006900 ORTHO05D008651 1.2e-27 128.6 113 62.8
CBR_g12177 Chara braunii HOM05D006900 ORTHO05D008651 2.0e-27 127.9 171 42.7
Cpa.g.sc9.61 Carica papaya HOM05D006900 ORTHO05D008651 4.5e-27 126.7 193 46.6
CSS0035140 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 1.0e-26 125.6 80 75.0
Cre09.g416200 Chlamydomonas reinhardtii HOM05D006900 ORTHO05D008651 1.0e-18 99.0 121 43.8
MCO01G208 Micromonas commoda HOM05D006900 ORTHO05D008651 5.0e-18 96.7 120 42.5
PRCOL_00006040 Prasinoderma coloniale HOM05D001216 ORTHO05D005688 2.4e-12 77.8 112 36.6
SGA_v2.0_scaffold157G37400 Striga asiatica HOM05D006900 ORTHO05D008651 1.9e-09 68.2 200 32.5
Cpa.g.sc9.62 Carica papaya HOM05D006900 ORTHO05D008651 1.2e-08 65.5 33 87.9


User provided reference genes

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