Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G20330 Arabidopsis thaliana HOM05D006183 ORTHO05D007844 0.0e+00 1192.9 649 100.0
AL3G53280 Arabidopsis lyrata HOM05D006183 ORTHO05D007844 0.0e+00 1096.3 657 90.7
Sp3g33570 Schrenkiella parvula HOM05D006183 ORTHO05D007844 8.3e-309 1063.1 666 87.2
Thhalv10001927m.g Eutrema salsugineum HOM05D006183 ORTHO05D007844 1.1e-305 1052.7 663 84.8
Carub.0003s3467 Capsella rubella HOM05D006183 ORTHO05D007844 1.9e-305 1052.0 658 89.5
CARHR110860 Cardamine hirsuta HOM05D006183 ORTHO05D007844 8.0e-304 1046.6 656 88.9
BcaB03g16820 Brassica carinata HOM05D006183 ORTHO05D007844 1.5e-302 1042.3 648 86.9
A07p00380 Brassica napus HOM05D006183 ORTHO05D007844 4.6e-291 1004.2 665 79.5
BraA07t27830Z Brassica rapa HOM05D006183 ORTHO05D007844 1.7e-290 1002.3 663 79.6
BcaC06g36716 Brassica carinata HOM05D006183 ORTHO05D007844 5.0e-290 1000.7 667 79.2
BolC7t40519H Brassica oleracea HOM05D006183 ORTHO05D007844 5.0e-290 1000.7 667 79.2
Aa31LG8G17320 Aethionema arabicum HOM05D006183 ORTHO05D007844 2.5e-289 998.4 658 81.2
C07p00800 Brassica napus HOM05D006183 ORTHO05D007844 2.0e-286 988.8 649 83.2
THA.LOC104814536 Tarenaya hassleriana HOM05D006183 ORTHO05D007844 1.0e-266 923.3 667 77.5
Hma1.2p1_2051F.1_g312550 Hydrangea macrophylla HOM05D006183 ORTHO05D007844 4.5e-254 881.3 644 70.7
Rhsim13G0040400 Rhododendron simsii HOM05D006183 ORTHO05D007844 2.2e-253 879.0 666 69.7
QL09p042323 Quercus lobata HOM05D006183 ORTHO05D007844 2.9e-253 878.6 648 69.3
Duzib133G1169 Durio zibethinus HOM05D006183 ORTHO05D007844 8.4e-253 877.1 663 67.4
Cpa.g.sc87.44 Carica papaya HOM05D006183 ORTHO05D007844 5.4e-252 874.4 646 71.8
Prupe.8G213600 Prunus persica HOM05D006183 ORTHO05D007844 2.1e-251 872.5 646 71.2
MELO3C012834.2 Cucumis melo HOM05D006183 ORTHO05D007844 6.0e-251 870.9 660 70.6
Lj1A75T45 Lonicera japonica HOM05D006183 ORTHO05D007844 6.0e-251 870.9 653 68.9
PGR044G1356 Punica granatum HOM05D006183 ORTHO05D007844 6.0e-251 870.9 666 69.7
Cfa002493 Carpinus fangiana HOM05D006183 ORTHO05D007844 1.8e-250 869.4 658 71.0
Dinv43057 Davidia involucrata HOM05D006183 ORTHO05D007844 3.0e-250 868.6 711 66.4
Sopen06g002920 Solanum pennellii HOM05D006183 ORTHO05D007844 3.9e-250 868.2 682 65.0
Haze_24717 Corylus avellana HOM05D006183 ORTHO05D007844 1.1e-249 866.7 662 70.8
Nitab4.5_0009671g0010 Nicotiana tabacum HOM05D006183 ORTHO05D007844 1.9e-249 865.9 666 68.5
Aqoxy5G00112 Aquilegia oxysepala HOM05D006183 ORTHO05D007844 3.3e-249 865.1 662 71.6
PGSC0003DMG400014711 Solanum tuberosum HOM05D006183 ORTHO05D007844 3.3e-249 865.1 672 66.2
Lsat_1_v5_gn_5_180141 Lactuca sativa HOM05D006183 ORTHO05D007844 5.6e-249 864.4 644 69.6
MD10G1174900 Malus domestica HOM05D006183 ORTHO05D007844 1.3e-248 863.2 653 69.2
CsaV3_3G028460 Cucumis sativus L. HOM05D006183 ORTHO05D007844 1.6e-248 862.8 660 70.2
CSS0020724 Camellia sinensis var. sinensis HOM05D006183 ORTHO05D007844 2.1e-248 862.4 681 66.1
Ca_08753_v3 Cicer arietinum L. HOM05D006183 ORTHO05D007844 2.8e-248 862.1 647 70.5
Gohir.D07G209800 Gossypium hirsutum HOM05D006183 ORTHO05D007844 6.2e-248 860.9 646 71.7
Nitab4.5_0000326g0320 Nicotiana tabacum HOM05D006183 ORTHO05D007844 6.2e-248 860.9 657 68.8
Gohir.A07G203800 Gossypium hirsutum HOM05D006183 ORTHO05D007844 8.1e-248 860.5 646 71.7
Gorai.001G237200 Gossypium raimondii HOM05D006183 ORTHO05D007844 8.1e-248 860.5 646 70.4
vmacro02713 Vaccinium macrocarpon HOM05D006183 ORTHO05D007844 1.4e-247 859.8 670 67.5
ECA248G2561 Erigeron canadensis HOM05D006183 ORTHO05D007844 2.4e-247 859.0 646 72.9
EL10Ac7g17706 Beta vulgaris HOM05D006183 ORTHO05D007844 3.1e-247 858.6 655 69.9
Thecc.01G248600 Theobroma cacao HOM05D006183 ORTHO05D007844 6.9e-247 857.4 659 68.0
TAR636G3003 Trochodendron aralioides HOM05D006183 ORTHO05D007844 9.0e-247 857.1 668 65.6
DCAR_018527 Daucus carota HOM05D006183 ORTHO05D007844 1.2e-246 856.7 670 64.6
CiPaw.04G191000 Carya illinoinensis HOM05D006183 ORTHO05D007844 7.6e-246 854.0 663 70.4
Atru.chr5.1959 Acer truncatum HOM05D006183 ORTHO05D007844 1.0e-245 853.6 658 69.5
TPR.G20058 Trifolium pratense HOM05D006183 ORTHO05D007844 1.7e-245 852.8 646 71.7
ClCG07G001450 Citrullus lanatus HOM05D006183 ORTHO05D007844 2.2e-245 852.4 668 67.5
Ciclev10019299m.g Citrus clementina HOM05D006183 ORTHO05D007844 4.9e-245 851.3 646 72.1
Cc01_g17710 Coffea canephora HOM05D006183 ORTHO05D007844 1.1e-244 850.1 665 67.5
MSTRG.18360 Avicennia marina HOM05D006183 ORTHO05D007844 1.9e-244 849.4 686 67.2
FAN15G0492 Fragaria x ananassa HOM05D006183 ORTHO05D007844 2.5e-244 849.0 638 68.5
Sed0027453 Sechium edule HOM05D006183 ORTHO05D007844 3.2e-244 848.6 662 69.8
Medtr7g098900 Medicago truncatula HOM05D006183 ORTHO05D007844 9.3e-244 847.0 652 69.0
Psat3g051320 Pisum sativum HOM05D006183 ORTHO05D007844 2.1e-243 845.9 638 70.5
VMungo1383G1346 Vigna mungo HOM05D006183 ORTHO05D007844 2.3e-242 842.4 642 68.7
RcHm_v2.0_Chr6g0286091 Rosa chinensis HOM05D006183 ORTHO05D007844 8.7e-242 840.5 657 65.6
arahy.Tifrunner.gnm1.ann1.P69TYL Arachis hypogaea HOM05D006183 ORTHO05D007844 1.9e-241 839.3 653 70.3
FAN24G0209 Fragaria x ananassa HOM05D006183 ORTHO05D007844 2.5e-241 839.0 641 68.5
Phvul.001G166600 Phaseolus vulgaris HOM05D006183 ORTHO05D007844 2.5e-241 839.0 641 68.8
Sc17g0002990 Simmondsia chinensis HOM05D006183 ORTHO05D007844 2.5e-241 839.0 672 64.0
Glyma.19G169500 Glycine max HOM05D006183 ORTHO05D007844 3.3e-241 838.6 641 70.8
Sabra14G0143600 Salix brachista HOM05D006183 ORTHO05D007844 4.3e-241 838.2 649 66.3
arahy.Tifrunner.gnm1.ann1.73B1UV Arachis hypogaea HOM05D006183 ORTHO05D007844 7.4e-241 837.4 651 70.0
Hund18298 Selenicereus undatus HOM05D006183 ORTHO05D007844 7.4e-241 837.4 651 67.7
FvH4_2g20290 Fragaria vesca HOM05D006183 ORTHO05D007844 9.6e-241 837.0 641 68.3
Potri.014G193500 Populus trichocarpa HOM05D006183 ORTHO05D007844 1.6e-240 836.3 667 67.2
GSVIVG01028442001 Vitis vinifera HOM05D006183 ORTHO05D007844 4.1e-239 831.6 483 80.3
SGA_v2.0_scaffold1G00669 Striga asiatica HOM05D006183 ORTHO05D007844 9.0e-239 830.5 673 66.7
HanXRQChr03g0066991 Helianthus annuus HOM05D006183 ORTHO05D007844 5.8e-238 827.8 643 67.2
SalBow4G1671 Salvia bowleyana HOM05D006183 ORTHO05D007844 8.4e-237 823.9 735 62.9
Lj1g0002370 Lotus japonicus HOM05D006183 ORTHO05D007844 1.9e-236 822.8 645 67.3
Migut.D00486 Erythranthe guttata HOM05D006183 ORTHO05D007844 5.5e-236 821.2 668 64.7
Eucgr.K01415 Eucalyptus grandis HOM05D006183 ORTHO05D007844 9.3e-236 820.5 678 69.0
PSO210G4577 Papaver somniferum HOM05D006183 ORTHO05D007844 9.3e-236 820.5 646 66.1
Peaxi162Scf00499g00067 Petunia axillaris HOM05D006183 ORTHO05D007844 4.6e-235 818.1 641 69.3
ATR0751G065 Amborella trichopoda HOM05D006183 ORTHO05D007844 2.3e-234 815.8 650 63.8
Lalb_Chr20g0113511 Lupinus albus HOM05D006183 ORTHO05D007844 2.8e-232 808.9 482 79.3
AUR62008815 Chenopodium quinoa HOM05D006183 ORTHO05D007844 3.7e-232 808.5 646 63.2
Manes.13G038900 Manihot esculenta HOM05D006183 ORTHO05D007844 6.9e-231 804.3 670 64.3
Solyc06g008110.4 Solanum lycopersicum HOM05D006183 ORTHO05D007844 2.7e-227 792.3 664 64.3
AUR62025425 Chenopodium quinoa HOM05D006183 ORTHO05D007844 2.5e-225 785.8 658 62.0
Os10g0464100 Oryza sativa ssp. japonica HOM05D006183 ORTHO05D007844 2.5e-225 785.8 484 75.8
Oeu015440.1 Olea europaea HOM05D006183 ORTHO05D007844 4.1e-223 778.5 700 60.4
SEGI_33423 Sequoiadendron giganteum HOM05D006183 ORTHO05D007844 1.5e-222 776.5 678 61.2
Zm00001eb222270 Zea mays HOM05D006183 ORTHO05D007844 2.0e-222 776.2 480 75.2
MBI10_g16795_MAGBIO Magnolia biondii HOM05D006183 ORTHO05D007844 7.2e-220 767.7 453 79.2
CDE02G0751 Ceratophyllum demersum HOM05D006183 ORTHO05D007844 3.6e-219 765.4 646 62.2
HPP92_025390 Vanilla planifolia HOM05D006183 ORTHO05D007844 3.6e-219 765.4 522 69.7
FAN27G0957 Fragaria x ananassa HOM05D006183 ORTHO05D007844 1.7e-216 756.5 441 78.7
SHI26778 Sapria himalayana HOM05D006183 ORTHO05D007844 6.3e-216 754.6 656 60.8
Lj1A75T44 Lonicera japonica HOM05D006183 ORTHO05D007844 1.0e-213 747.3 646 59.8
AagrBONN_evm.TU.Sc2ySwM_228.230 Anthoceros agrestis HOM05D006183 ORTHO05D007844 2.0e-206 723.0 640 57.2
Actinidia37559 Actinidia chinensis HOM05D006183 ORTHO05D007844 5.5e-204 714.9 559 69.9
COL.COLO4_20954 Corchorus olitorius HOM05D006183 ORTHO05D007844 1.0e-202 710.7 650 57.8
CBR_g29722 Chara braunii HOM05D006183 ORTHO05D007844 5.2e-186 655.2 506 62.8
Mapoly0020s0160 Marchantia polymorpha HOM05D006183 ORTHO05D007844 1.2e-179 634.0 674 55.5
SMO117G0187 Selaginella moellendorffii HOM05D006183 ORTHO05D007844 2.8e-179 632.9 648 53.5
Pp3c3_26410 Physcomitrium patens HOM05D006183 ORTHO05D007844 4.9e-176 622.1 652 55.7
Actinidia30118 Actinidia chinensis HOM05D006183 ORTHO05D007844 1.2e-169 600.9 645 52.9
MD05G1186900 Malus domestica HOM05D006183 ORTHO05D007844 1.5e-148 530.8 552 52.9
Dinv19261 Davidia involucrata HOM05D006183 ORTHO05D007844 9.9e-145 518.1 468 62.8
SEGI_26680 Sequoiadendron giganteum HOM05D006183 ORTHO05D007844 2.9e-144 516.5 529 55.4
Cre04.g217750 Chlamydomonas reinhardtii HOM05D006183 ORTHO05D007844 1.0e-120 438.3 517 46.0
BcaNung04798 Brassica carinata HOM05D006183 ORTHO05D007844 2.2e-120 437.2 304 75.0
C09p15190 Brassica napus HOM05D006183 ORTHO05D007844 2.2e-120 437.2 304 75.0
BolC9t54425H Brassica oleracea HOM05D006183 ORTHO05D007844 2.2e-120 437.2 304 75.0
MCO16G174 Micromonas commoda HOM05D006183 ORTHO05D007844 7.9e-110 402.1 497 43.7
Rhsim08G0025400 Rhododendron simsii HOM05D006183 ORTHO05D007844 2.2e-96 357.5 365 55.1
unitig_22.g6309 Utricularia gibba HOM05D006183 ORTHO05D007844 2.4e-90 337.4 390 54.1
AagrBONN_evm.TU.Sc2ySwM_117.1688 Anthoceros agrestis HOM05D006183 ORTHO05D007844 4.3e-71 273.5 166 75.3
SHI26811 Sapria himalayana HOM05D006183 ORTHO05D007844 8.9e-61 239.2 342 43.0
Cfa024676 Carpinus fangiana HOM05D006183 ORTHO05D007844 1.3e-59 235.3 499 32.9
PRCOL_00006356 Prasinoderma coloniale HOM05D006183 ORTHO05D007844 1.7e-59 235.0 515 33.0
unitig_22.g6310 Utricularia gibba HOM05D006183 ORTHO05D007844 2.1e-46 191.4 109 78.9
AagrBONN_evm.TU.Sc2ySwM_117.1686 Anthoceros agrestis HOM05D006183 ORTHO05D007844 1.4e-34 152.1 106 67.0
RcHm_v2.0_Chr6g0286201 Rosa chinensis HOM05D006183 ORTHO05D007844 1.9e-26 125.2 99 61.6
BcaB07g31601 Brassica carinata HOM05D006183 ORTHO05D007844 1.9e-15 88.6 104 49.0
HanXRQChr13g0404811 Helianthus annuus HOM05D006183 ORTHO05D007844 2.0e-12 78.6 66 59.1
Dinv36951 Davidia involucrata HOM05D006183 ORTHO05D007844 3.4e-12 77.8 47 74.5
HanXRQChr14g0442591 Helianthus annuus HOM05D006183 ORTHO05D007844 3.4e-12 77.8 66 57.6
HPP92_028272 Vanilla planifolia HOM05D006183 ORTHO05D007844 4.6e-09 67.4 39 76.9
Lalb_Chr19g0128501 Lupinus albus HOM05D003335 ORTHO05D003853 1.3e-08 65.9 267 26.2
Oeu011224.1 Olea europaea HOM05D003335 ORTHO05D003853 1.3e-08 65.9 268 25.4
SalBow3G1035 Salvia bowleyana HOM05D003335 ORTHO05D003853 6.7e-08 63.5 277 25.3
MSTRG.9861 Avicennia marina HOM05D003335 ORTHO05D003853 4.3e-07 60.8 268 25.7
AagrBONN_evm.TU.Sc2ySwM_117.1687 Anthoceros agrestis HOM05D006183 ORTHO05D007844 5.7e-07 60.5 56 53.6
Ca_11904_v3 Cicer arietinum L. HOM05D003335 ORTHO05D003853 7.4e-07 60.1 267 25.8
Ca_11905_v3 Cicer arietinum L. HOM05D003335 ORTHO05D003853 7.4e-07 60.1 267 25.8
MBI16_g15538_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 9.7e-07 59.7 174 25.9
Ca_04302_v3 Cicer arietinum L. HOM05D005508 ORTHO05D006882 1.3e-06 59.3 217 24.4
Aqoxy2G03744 Aquilegia oxysepala HOM05D003335 ORTHO05D003853 3.7e-06 57.8 268 24.6
Mapoly0001s0287 Marchantia polymorpha HOM05D004768 ORTHO05D005812 3.7e-06 57.8 150 27.3
VMungo0720G1182 Vigna mungo HOM05D003335 ORTHO05D003853 4.8e-06 57.4 267 24.7


User provided reference genes

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