Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G76860 Arabidopsis thaliana HOM05D004026 ORTHO05D004712 2.5e-47 191.8 99 100.0
AL2G36980 Arabidopsis lyrata HOM05D004026 ORTHO05D004712 1.6e-46 189.1 99 98.0
Carub.0002s2374 Capsella rubella HOM05D004026 ORTHO05D004712 4.0e-45 184.5 97 95.9
CARHR070370 Cardamine hirsuta HOM05D004026 ORTHO05D004712 6.8e-45 183.7 96 96.9
BcaB02g07078 Brassica carinata HOM05D004026 ORTHO05D004712 2.6e-44 181.8 96 95.8
BcaC08g45508 Brassica carinata HOM05D004026 ORTHO05D004712 2.6e-44 181.8 96 95.8
A07p28330 Brassica napus HOM05D004026 ORTHO05D004712 2.6e-44 181.8 96 95.8
C06p31770 Brassica napus HOM05D004026 ORTHO05D004712 2.6e-44 181.8 96 95.8
BolC6t38306H Brassica oleracea HOM05D004026 ORTHO05D004712 2.6e-44 181.8 96 95.8
BraA07t30470Z Brassica rapa HOM05D004026 ORTHO05D004712 2.6e-44 181.8 96 95.8
Aa31LG4G6900 Aethionema arabicum HOM05D004026 ORTHO05D004712 3.4e-44 181.4 97 94.8
BcaC03g15707 Brassica carinata HOM05D004026 ORTHO05D004712 9.8e-44 179.9 95 95.8
A02p20950 Brassica napus HOM05D004026 ORTHO05D004712 9.8e-44 179.9 95 95.8
C02p34120 Brassica napus HOM05D004026 ORTHO05D004712 9.8e-44 179.9 95 95.8
BolC2t09428H Brassica oleracea HOM05D004026 ORTHO05D004712 9.8e-44 179.9 95 95.8
BraA02t07126Z Brassica rapa HOM05D004026 ORTHO05D004712 9.8e-44 179.9 95 95.8
Sp5g31990 Schrenkiella parvula HOM05D004026 ORTHO05D004712 1.3e-43 179.5 95 95.8
BcaC08g47186 Brassica carinata HOM05D004026 ORTHO05D004712 2.8e-43 178.3 96 93.8
A07p42450 Brassica napus HOM05D004026 ORTHO05D004712 2.8e-43 178.3 96 93.8
C06p51010 Brassica napus HOM05D004026 ORTHO05D004712 2.8e-43 178.3 96 93.8
BolC6t40126H Brassica oleracea HOM05D004026 ORTHO05D004712 2.8e-43 178.3 96 93.8
BraA07t31770Z Brassica rapa HOM05D004026 ORTHO05D004712 2.8e-43 178.3 96 93.8
BcaB05g25014 Brassica carinata HOM05D004026 ORTHO05D004712 4.8e-43 177.6 95 94.7
Thhalv10019321m.g Eutrema salsugineum HOM05D004026 ORTHO05D004712 4.8e-43 177.6 95 94.7
TWI34G0684 Tripterygium wilfordii HOM05D004026 ORTHO05D004712 4.8e-43 177.6 97 90.7
AL1G34240 Arabidopsis lyrata HOM05D004026 ORTHO05D004712 6.3e-43 177.2 99 90.9
THA.LOC104813712 Tarenaya hassleriana HOM05D004026 ORTHO05D004712 8.3e-43 176.8 97 90.7
Sp1g18830 Schrenkiella parvula HOM05D004026 ORTHO05D004712 1.1e-42 176.4 96 92.7
THA.LOC104812039 Tarenaya hassleriana HOM05D004026 ORTHO05D004712 1.1e-42 176.4 97 90.7
Aqoxy5G02098 Aquilegia oxysepala HOM05D004026 ORTHO05D004712 1.4e-42 176.0 97 89.7
AT1G21190 Arabidopsis thaliana HOM05D004026 ORTHO05D004712 1.4e-42 176.0 96 91.7
Glyma.02G082300 Glycine max HOM05D004026 ORTHO05D004712 1.4e-42 176.0 97 91.8
Eucgr.F02710 Eucalyptus grandis HOM05D004026 ORTHO05D004712 1.8e-42 175.6 97 89.7
Gohir.A05G243000 Gossypium hirsutum HOM05D004026 ORTHO05D004712 1.8e-42 175.6 97 89.7
Gohir.D05G244500 Gossypium hirsutum HOM05D004026 ORTHO05D004712 1.8e-42 175.6 97 89.7
Gorai.009G253600 Gossypium raimondii HOM05D004026 ORTHO05D004712 1.8e-42 175.6 97 89.7
Nitab4.5_0000964g0020 Nicotiana tabacum HOM05D004026 ORTHO05D004712 1.8e-42 175.6 97 89.7
PGR042G0059 Punica granatum HOM05D004026 ORTHO05D004712 1.8e-42 175.6 97 89.7
Duzib116G0179 Durio zibethinus HOM05D004026 ORTHO05D004712 2.4e-42 175.3 97 89.7
Lj2g0026454 Lotus japonicus HOM05D004026 ORTHO05D004712 2.4e-42 175.3 97 89.7
Aa31LG7G5300 Aethionema arabicum HOM05D004026 ORTHO05D004712 3.1e-42 174.9 96 90.6
Carub.0001s2062 Capsella rubella HOM05D004026 ORTHO05D004712 3.1e-42 174.9 96 90.6
CARHR021640 Cardamine hirsuta HOM05D004026 ORTHO05D004712 3.1e-42 174.9 99 89.9
Phvul.004G095700 Phaseolus vulgaris HOM05D004026 ORTHO05D004712 3.1e-42 174.9 97 89.7
Atru.chr13.2143 Acer truncatum HOM05D004026 ORTHO05D004712 4.1e-42 174.5 97 88.7
Ciclev10002950m.g Citrus clementina HOM05D004026 ORTHO05D004712 4.1e-42 174.5 97 88.7
Glyma.16G167900 Glycine max HOM05D004026 ORTHO05D004712 4.1e-42 174.5 97 89.7
Hma1.2p1_0105F.1_g050760 Hydrangea macrophylla HOM05D004026 ORTHO05D004712 4.1e-42 174.5 97 89.7
Nn1g06097 Nelumbo nucifera HOM05D004026 ORTHO05D004712 4.1e-42 174.5 97 89.7
TAR628G0743 Trochodendron aralioides HOM05D004026 ORTHO05D004712 4.1e-42 174.5 97 89.7
Gohir.A02G112705 Gossypium hirsutum HOM05D004026 ORTHO05D004712 5.4e-42 174.1 97 88.7
Manes.18G091400 Manihot esculenta HOM05D004026 ORTHO05D004712 5.4e-42 174.1 97 88.7
Psat7g153480 Pisum sativum HOM05D004026 ORTHO05D004712 5.4e-42 174.1 98 90.8
Potri.005G191600 Populus trichocarpa HOM05D004026 ORTHO05D004712 5.4e-42 174.1 97 88.7
Sabra05G0146400 Salix brachista HOM05D004026 ORTHO05D004712 5.4e-42 174.1 97 88.7
Nn5g28727 Nelumbo nucifera HOM05D004026 ORTHO05D004712 7.0e-42 173.7 97 89.7
Cpa.g.sc2145.2 Carica papaya HOM05D004026 ORTHO05D004712 9.1e-42 173.3 97 88.7
Dinv41090 Davidia involucrata HOM05D004026 ORTHO05D004712 9.1e-42 173.3 97 88.7
Migut.C01015 Erythranthe guttata HOM05D004026 ORTHO05D004712 9.1e-42 173.3 97 89.7
QL02p024017 Quercus lobata HOM05D004026 ORTHO05D004712 9.1e-42 173.3 97 88.7
Sabra02G0054100 Salix brachista HOM05D004026 ORTHO05D004712 9.1e-42 173.3 97 88.7
Hund26698 Selenicereus undatus HOM05D004026 ORTHO05D004712 9.1e-42 173.3 97 88.7
TAR381G0202 Trochodendron aralioides HOM05D004026 ORTHO05D004712 9.1e-42 173.3 97 88.7
Zm00001eb146730 Zea mays HOM05D004026 ORTHO05D004712 9.1e-42 173.3 96 90.6
CSS0019157 Camellia sinensis var. sinensis HOM05D004026 ORTHO05D004712 1.2e-41 172.9 97 87.6
MELO3C008344.2 Cucumis melo HOM05D004026 ORTHO05D004712 1.2e-41 172.9 96 88.5
Migut.N03226 Erythranthe guttata HOM05D004026 ORTHO05D004712 1.2e-41 172.9 97 88.7
PSO541G1854 Papaver somniferum HOM05D004026 ORTHO05D004712 1.2e-41 172.9 94 92.6
PSO675G7538 Papaver somniferum HOM05D004026 ORTHO05D004712 1.2e-41 172.9 94 92.6
Peaxi162Scf00583g00530 Petunia axillaris HOM05D004026 ORTHO05D004712 1.2e-41 172.9 96 90.6
Thecc.08G150600 Theobroma cacao HOM05D004026 ORTHO05D004712 1.2e-41 172.9 97 87.6
BcaB07g32108 Brassica carinata HOM05D004026 ORTHO05D004712 1.6e-41 172.6 96 90.6
A06p17220 Brassica napus HOM05D004026 ORTHO05D004712 1.6e-41 172.6 96 90.6
BraA06t24824Z Brassica rapa HOM05D004026 ORTHO05D004712 1.6e-41 172.6 96 90.6
CANSAT25G0019 Cannabis sativa HOM05D004026 ORTHO05D004712 1.6e-41 172.6 97 88.7
CAN.G249.12 Capsicum annuum HOM05D004026 ORTHO05D004712 1.6e-41 172.6 96 89.6
ECA236G1806 Erigeron canadensis HOM05D004026 ORTHO05D004712 1.6e-41 172.6 97 87.6
FvH4_2g13861 Fragaria vesca HOM05D004026 ORTHO05D004712 1.6e-41 172.6 97 87.6
FAN15G1801 Fragaria x ananassa HOM05D004026 ORTHO05D004712 1.6e-41 172.6 97 87.6
FAN20G2578 Fragaria x ananassa HOM05D004026 ORTHO05D004712 1.6e-41 172.6 97 87.6
FAN27G2615 Fragaria x ananassa HOM05D004026 ORTHO05D004712 1.6e-41 172.6 97 87.6
HanXRQChr06g0182631 Helianthus annuus HOM05D004026 ORTHO05D004712 1.6e-41 172.6 97 87.6
HanXRQChr11g0339331 Helianthus annuus HOM05D004026 ORTHO05D004712 1.6e-41 172.6 97 87.6
Lsat_1_v5_gn_7_71840 Lactuca sativa HOM05D004026 ORTHO05D004712 1.6e-41 172.6 97 87.6
Lalb_Chr01g0009621 Lupinus albus HOM05D004026 ORTHO05D004712 1.6e-41 172.6 94 91.5
Medtr4g083170 Medicago truncatula HOM05D004026 ORTHO05D004712 1.6e-41 172.6 94 91.5
Phvul.004G129000 Phaseolus vulgaris HOM05D004026 ORTHO05D004712 1.6e-41 172.6 97 88.7
RcHm_v2.0_Chr6g0275571 Rosa chinensis HOM05D004026 ORTHO05D004712 1.6e-41 172.6 97 87.6
Solyc11g005370.2 Solanum lycopersicum HOM05D004026 ORTHO05D004712 1.6e-41 172.6 96 89.6
Sopen11g001380 Solanum pennellii HOM05D004026 ORTHO05D004712 1.6e-41 172.6 96 89.6
PGSC0003DMG400003988 Solanum tuberosum HOM05D004026 ORTHO05D004712 1.6e-41 172.6 96 89.6
Actinidia06668 Actinidia chinensis HOM05D004026 ORTHO05D004712 2.0e-41 172.2 97 88.7
arahy.Tifrunner.gnm1.ann1.9PQ1GY Arachis hypogaea HOM05D004026 ORTHO05D004712 2.0e-41 172.2 96 88.5
arahy.Tifrunner.gnm1.ann1.XJQY2Y Arachis hypogaea HOM05D004026 ORTHO05D004712 2.0e-41 172.2 96 88.5
ClCG08G006960 Citrullus lanatus HOM05D004026 ORTHO05D004712 2.0e-41 172.2 96 88.5
FAN24G0951 Fragaria x ananassa HOM05D004026 ORTHO05D004712 2.0e-41 172.2 97 86.6
Gorai.002G055500 Gossypium raimondii HOM05D004026 ORTHO05D004712 2.0e-41 172.2 97 87.6
MBI09_g18621_MAGBIO Magnolia biondii HOM05D004026 ORTHO05D004712 2.0e-41 172.2 96 88.5
Potri.002G068800 Populus trichocarpa HOM05D004026 ORTHO05D004712 2.0e-41 172.2 97 87.6
Sed0010346 Sechium edule HOM05D004026 ORTHO05D004712 2.0e-41 172.2 96 88.5
TAR625G0830 Trochodendron aralioides HOM05D004026 ORTHO05D004712 2.0e-41 172.2 97 87.6
MD05G1024000 Malus domestica HOM05D004026 ORTHO05D004712 2.7e-41 171.8 97 87.6
Prupe.8G028400 Prunus persica HOM05D004026 ORTHO05D004712 2.7e-41 171.8 97 86.6
HPP92_016150 Vanilla planifolia HOM05D004026 ORTHO05D004712 2.7e-41 171.8 97 87.6
Ah.05g167900 Amaranthus hybridus HOM05D004026 ORTHO05D004712 3.5e-41 171.4 94 90.4
EL10Ac1g01537 Beta vulgaris HOM05D004026 ORTHO05D004712 3.5e-41 171.4 94 90.4
Lj1g0021939 Lotus japonicus HOM05D004026 ORTHO05D004712 3.5e-41 171.4 94 90.4
MD10G1024500 Malus domestica HOM05D004026 ORTHO05D004712 3.5e-41 171.4 97 87.6
QL09p017237 Quercus lobata HOM05D004026 ORTHO05D004712 3.5e-41 171.4 96 87.5
SEGI_01220 Sequoiadendron giganteum HOM05D004026 ORTHO05D004712 3.5e-41 171.4 97 87.6
Dinv25856 Davidia involucrata HOM05D004026 ORTHO05D004712 4.5e-41 171.0 97 87.6
Lalb_Chr03g0035271 Lupinus albus HOM05D004026 ORTHO05D004712 4.5e-41 171.0 94 90.4
Manes.02G178900 Manihot esculenta HOM05D004026 ORTHO05D004712 4.5e-41 171.0 97 86.6
TPR.G14063 Trifolium pratense HOM05D004026 ORTHO05D004712 4.5e-41 171.0 94 90.4
TPR.G8174 Trifolium pratense HOM05D004026 ORTHO05D004712 4.5e-41 171.0 94 90.4
Peaxi162Scf00025g02218 Petunia axillaris HOM05D004026 ORTHO05D004712 5.9e-41 170.6 96 89.6
SalBow6G5104 Salvia bowleyana HOM05D004026 ORTHO05D004712 5.9e-41 170.6 97 86.6
Cc10_g14760 Coffea canephora HOM05D004026 ORTHO05D004712 7.7e-41 170.2 96 88.5
Oeu046026.1 Olea europaea HOM05D004026 ORTHO05D004712 7.7e-41 170.2 97 86.6
Rhsim06G0071000 Rhododendron simsii HOM05D004026 ORTHO05D004712 7.7e-41 170.2 97 87.6
Rhsim06G0135800 Rhododendron simsii HOM05D004026 ORTHO05D004712 7.7e-41 170.2 97 87.6
Sed0019016 Sechium edule HOM05D004026 ORTHO05D004712 7.7e-41 170.2 96 87.5
unitig_744.g24567 Utricularia gibba HOM05D004026 ORTHO05D004712 7.7e-41 170.2 97 87.6
CDE06G1840 Ceratophyllum demersum HOM05D004026 ORTHO05D004712 1.0e-40 169.9 97 86.6
CDE08G0955 Ceratophyllum demersum HOM05D004026 ORTHO05D004712 1.0e-40 169.9 97 86.6
Duzib093G0799 Durio zibethinus HOM05D004026 ORTHO05D004712 1.0e-40 169.9 97 86.6
Hma1.2p1_0006F.1_g004910 Hydrangea macrophylla HOM05D004026 ORTHO05D004712 1.3e-40 169.5 97 86.6
ATR0772G183 Amborella trichopoda HOM05D004026 ORTHO05D004712 1.7e-40 169.1 95 87.4
Gohir.D03G060607 Gossypium hirsutum HOM05D004026 ORTHO05D004712 1.7e-40 169.1 97 86.6
Os01g0866700 Oryza sativa ssp. japonica HOM05D004026 ORTHO05D004712 2.3e-40 168.7 92 92.4
unitig_21.g20177 Utricularia gibba HOM05D004026 ORTHO05D004712 2.3e-40 168.7 97 86.6
Dinv09936 Davidia involucrata HOM05D004026 ORTHO05D004712 1.9e-39 165.6 97 84.5
Mapoly0008s0084 Marchantia polymorpha HOM05D004026 ORTHO05D004712 1.9e-39 165.6 97 84.5
DCAR_014432 Daucus carota HOM05D004026 ORTHO05D004712 2.5e-39 165.2 92 89.1
AagrBONN_evm.TU.Sc2ySwM_117.2023 Anthoceros agrestis HOM05D004026 ORTHO05D004712 4.2e-39 164.5 99 81.8
Pp3c24_12260 Physcomitrium patens HOM05D004026 ORTHO05D004712 5.5e-39 164.1 97 82.5
SMO169G0100 Selaginella moellendorffii HOM05D004026 ORTHO05D004712 7.2e-39 163.7 97 81.4
MCO12G407 Micromonas commoda HOM05D004026 ORTHO05D004712 1.6e-38 162.5 93 83.9
Haze_17748 Corylus avellana HOM05D004026 ORTHO05D004712 2.1e-38 162.2 114 74.6
BolC5t30689H Brassica oleracea HOM05D004026 ORTHO05D004712 8.0e-38 160.2 107 80.4
Cre16.g662300 Chlamydomonas reinhardtii HOM05D004026 ORTHO05D004712 1.8e-37 159.1 92 83.7
BcaC05g26025 Brassica carinata HOM05D004026 ORTHO05D004712 2.6e-36 155.2 107 78.5
COL.COLO4_37834 Corchorus olitorius HOM05D004026 ORTHO05D004712 1.6e-33 146.0 96 79.2
PRCOL_00001118 Prasinoderma coloniale HOM05D004026 ORTHO05D004712 3.5e-33 144.8 92 72.8
CsaV3_1G019700 Cucumis sativus L. HOM05D004026 ORTHO05D004712 1.1e-31 139.8 124 62.9
Cfa018326 Carpinus fangiana HOM05D004026 ORTHO05D004712 2.5e-31 138.7 134 59.0
GSVIVG01034520001 Vitis vinifera HOM05D004026 ORTHO05D004712 4.7e-30 134.4 78 85.9
AUR62026713 Chenopodium quinoa HOM05D004026 ORTHO05D004712 8.0e-30 133.7 96 72.9
TWI60G1706 Tripterygium wilfordii HOM05D004026 ORTHO05D004712 5.7e-28 127.5 71 88.7
Nitab4.5_0000004g0160 Nicotiana tabacum HOM05D004026 ORTHO05D004712 7.5e-28 127.1 71 87.3
Prupe.3G148200 Prunus persica HOM05D004026 ORTHO05D004712 7.5e-28 127.1 81 77.8
CiPaw.16G013200 Carya illinoinensis HOM05D004026 ORTHO05D004712 1.3e-27 126.3 71 87.3
CsaV3_6G005290 Cucumis sativus L. HOM05D004026 ORTHO05D004712 1.7e-27 125.9 121 61.2
MD10G1024600 Malus domestica HOM05D004026 ORTHO05D004712 1.7e-27 125.9 71 87.3
Rhsim10G0141800 Rhododendron simsii HOM05D004026 ORTHO05D004712 1.7e-27 125.9 71 87.3
Ca_28109_v3 Cicer arietinum L. HOM05D004026 ORTHO05D004712 3.7e-27 124.8 68 91.2
Haze_27742 Corylus avellana HOM05D004026 ORTHO05D004712 4.9e-27 124.4 89 67.4
AUR62013577 Chenopodium quinoa HOM05D004026 ORTHO05D004712 1.1e-26 123.2 70 87.1
C05p19920 Brassica napus HOM05D004026 ORTHO05D004712 3.9e-24 114.8 104 65.4
SalBow4G0880 Salvia bowleyana HOM05D004026 ORTHO05D004712 1.1e-23 113.2 93 65.6
Sc02g0004120 Simmondsia chinensis HOM05D004026 ORTHO05D004712 9.5e-23 110.2 60 88.3
MSTRG.22373 Avicennia marina HOM05D004026 ORTHO05D004712 6.2e-22 107.5 68 76.5
Nitab4.5_0002064g0050 Nicotiana tabacum HOM05D004026 ORTHO05D004712 8.0e-22 107.1 58 86.2
Nitab4.5_0010284g0010 Nicotiana tabacum HOM05D004026 ORTHO05D004712 8.0e-22 107.1 57 89.5
SHI20484 Sapria himalayana HOM05D004026 ORTHO05D004712 1.4e-21 106.3 58 87.9
Cfa023910 Carpinus fangiana HOM05D004026 ORTHO05D004712 1.5e-20 102.8 88 55.7
Glyma.10G120000 Glycine max HOM05D004026 ORTHO05D004712 4.4e-20 101.3 61 80.3
vmacro12827 Vaccinium macrocarpon HOM05D004026 ORTHO05D004712 1.1e-18 96.7 137 45.3
Oeu011940.1 Olea europaea HOM05D004026 ORTHO05D004712 1.6e-17 92.8 51 88.2
RcHm_v2.0_Chr6g0275581 Rosa chinensis HOM05D004026 ORTHO05D004712 3.5e-17 91.7 51 88.2
CiPaw.15G016800 Carya illinoinensis HOM05D004026 ORTHO05D004712 1.7e-16 89.4 50 86.0
CBR_g88561 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-10 70.1 60 60.0


User provided reference genes

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