Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 6.9e-212 740.3 366 100.0
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 7.4e-198 693.7 367 93.7
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 5.9e-195 684.1 363 92.3
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 1.7e-189 666.0 354 91.8
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 1.5e-182 642.9 354 89.5
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 2.0e-179 632.5 344 89.8
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 5.7e-174 614.4 356 86.2
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 7.0e-172 607.4 354 84.7
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 3.5e-171 605.1 355 85.9
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 1.3e-170 603.2 353 85.6
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 5.0e-170 601.3 353 84.7
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 8.6e-170 600.5 351 84.6
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 9.5e-169 597.0 352 84.7
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 1.0e-162 577.0 355 83.1
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 6.6e-154 547.7 349 78.2
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 3.0e-138 495.7 364 69.0
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 6.6e-138 494.6 371 67.1
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 6.2e-136 488.0 374 67.1
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 5.2e-135 485.0 370 66.8
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 3.8e-133 478.8 343 70.8
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.1e-132 477.2 325 72.9
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 1.4e-132 476.9 362 68.2
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 1.4e-132 476.9 303 75.9
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 1.9e-132 476.5 355 68.7
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 4.2e-132 475.3 326 73.3
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 5.4e-132 474.9 330 71.8
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 7.1e-132 474.6 325 72.6
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 9.3e-132 474.2 303 74.9
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 9.3e-132 474.2 396 62.4
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 1.2e-131 473.8 341 70.1
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 1.2e-131 473.8 302 74.2
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 1.6e-131 473.4 370 67.6
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 1.6e-131 473.4 336 72.3
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 4.3e-129 465.3 371 63.6
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 9.6e-129 464.2 355 66.5
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 8.1e-128 461.1 361 65.7
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 1.1e-127 460.7 352 67.3
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 3.1e-127 459.1 348 69.0
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 3.1e-127 459.1 376 63.8
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 9.0e-127 457.6 315 70.2
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 1.5e-126 456.8 343 67.1
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 5.8e-126 454.9 340 67.9
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 9.9e-126 454.1 345 64.9
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 1.7e-125 453.4 326 70.9
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 6.4e-125 451.4 336 67.0
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 2.4e-124 449.5 312 70.5
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 6.0e-123 444.9 357 65.5
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 6.0e-123 444.9 348 64.1
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 1.0e-122 444.1 334 66.8
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 1.3e-122 443.7 358 64.2
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 6.6e-122 441.4 325 69.5
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 8.7e-122 441.0 368 62.5
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 8.7e-122 441.0 381 60.9
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 3.3e-121 439.1 342 64.3
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 4.3e-121 438.7 362 64.1
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 9.6e-121 437.6 362 61.9
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 1.3e-120 437.2 340 67.4
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 1.6e-120 436.8 372 61.8
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 2.1e-120 436.4 341 63.3
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 2.1e-120 436.4 347 64.6
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 3.6e-120 435.6 327 67.0
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 6.2e-120 434.9 335 66.3
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 1.1e-119 434.1 345 65.2
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 3.1e-119 432.6 357 61.6
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 4.0e-119 432.2 382 59.4
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 9.0e-119 431.0 308 69.2
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 5.8e-118 428.3 340 63.2
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 7.6e-118 427.9 332 63.6
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 1.3e-117 427.2 325 65.2
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 1.3e-117 427.2 309 67.6
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 8.4e-117 424.5 337 63.5
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 1.1e-116 424.1 342 61.4
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 5.5e-116 421.8 353 61.2
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 9.3e-116 421.0 312 64.4
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 2.7e-115 419.5 383 56.7
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 3.5e-115 419.1 327 61.2
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 5.1e-114 415.2 317 65.9
Sc15g0002960 Simmondsia chinensis HOM05D002121 ORTHO05D008891 5.1e-114 415.2 294 68.0
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 3.3e-113 412.5 303 66.3
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 4.2e-108 395.6 345 60.9
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 5.1e-106 388.7 343 61.8
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 8.7e-106 387.9 310 61.6
Dinv14647 Davidia involucrata HOM05D002121 ORTHO05D008891 3.3e-105 386.0 264 71.6
Os02g0552600 Oryza sativa ssp. japonica HOM05D002121 ORTHO05D008891 7.6e-102 374.8 312 58.3
Zm00001eb243580 Zea mays HOM05D002121 ORTHO05D008891 6.5e-101 371.7 365 53.7
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 7.2e-100 368.2 301 57.8
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 2.3e-98 363.2 287 62.4
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 1.1e-97 360.9 250 69.6
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 1.9e-97 360.1 306 58.8
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 1.9e-97 360.1 306 58.8
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 1.6e-96 357.1 303 58.1
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 2.2e-96 356.7 306 57.2
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 4.8e-96 355.5 295 62.4
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 3.1e-95 352.8 292 62.7
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 5.9e-94 348.6 295 59.3
Sabra05G0136700 Salix brachista HOM05D002121 ORTHO05D008891 1.0e-93 347.8 220 74.5
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 2.5e-92 343.2 309 55.7
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 2.5e-84 316.6 318 53.1
BcaB03g12777 Brassica carinata HOM05D002121 ORTHO05D008891 1.6e-83 313.9 196 83.7
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 1.4e-79 300.8 342 51.5
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 3.3e-73 279.6 367 44.1
GSVIVG01008832001 Vitis vinifera HOM05D002121 ORTHO05D008891 4.4e-73 279.3 169 79.9
ECA246G4340 Erigeron canadensis HOM05D002121 ORTHO05D008891 3.5e-70 269.6 169 76.9
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 7.2e-68 261.9 410 39.8
Migut.C00404 Erythranthe guttata HOM05D002121 ORTHO05D008891 1.8e-66 257.3 249 54.2
SalBow7G2694 Salvia bowleyana HOM05D002121 ORTHO05D008891 5.2e-66 255.8 171 70.8
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 2.4e-63 246.9 374 39.8
Sc15g0002990 Simmondsia chinensis HOM05D002121 ORTHO05D008891 1.0e-53 214.9 168 61.9
Oeu032210.1 Olea europaea HOM05D002121 ORTHO05D008891 2.3e-53 213.8 142 73.2
MBI06_g44498_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 1.3e-45 188.0 201 50.7
Sc15g0002970 Simmondsia chinensis HOM05D002121 ORTHO05D008891 1.5e-33 147.9 123 61.0
RcHm_v2.0_Chr2g0118881 Rosa chinensis HOM05D002121 ORTHO05D008891 7.8e-30 135.6 96 68.8
PRCOL_00001975 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 4.6e-22 109.8 328 28.4
Cfa022494 Carpinus fangiana HOM05D002121 ORTHO05D008891 1.1e-18 98.6 219 32.9
Hma1.2p1_0612F.1_g188810 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 6.4e-16 89.4 57 73.7
HanXRQChr15g0473481 Helianthus annuus HOM05D002121 ORTHO05D008891 7.1e-15 85.9 51 74.5
PRCOL_00004066 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 6.6e-13 79.3 144 31.9
CBR_g3761 Chara braunii HOM05D002121 ORTHO05D008891 5.8e-09 66.2 195 29.2
Sopen03g032940 Solanum pennellii HOM05D007129 ORTHO05D008680 6.0e-06 56.2 168 29.2


User provided reference genes

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