Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G11520 Arabidopsis thaliana HOM05D002794 ORTHO05D003763 3.7e-95 351.7 197 100.0
Sp7g19760 Schrenkiella parvula HOM05D002794 ORTHO05D003763 7.4e-43 177.9 114 86.0
AL7G32340 Arabidopsis lyrata HOM05D002794 ORTHO05D003763 2.8e-42 176.0 114 85.1
AT4G21660 Arabidopsis thaliana HOM05D002794 ORTHO05D003763 6.2e-42 174.9 114 84.2
BcaNung02772 Brassica carinata HOM05D002794 ORTHO05D003763 6.2e-42 174.9 114 83.3
Thhalv10024772m.g Eutrema salsugineum HOM05D002794 ORTHO05D003763 6.2e-42 174.9 114 84.2
BraA01t01239Z Brassica rapa HOM05D002794 ORTHO05D003763 8.2e-42 174.5 114 83.3
A01p12950 Brassica napus HOM05D002794 ORTHO05D003763 1.8e-41 173.3 114 82.5
C01p15590 Brassica napus HOM05D002794 ORTHO05D003763 2.4e-41 172.9 112 83.9
BolC1t01511H Brassica oleracea HOM05D002794 ORTHO05D003763 2.4e-41 172.9 112 83.9
Aa31LG6G3640 Aethionema arabicum HOM05D002794 ORTHO05D003763 4.0e-41 172.2 114 82.5
Aa31LG9G9480 Aethionema arabicum HOM05D002794 ORTHO05D003763 4.5e-40 168.7 114 81.6
Carub.0007s1975 Capsella rubella HOM05D002794 ORTHO05D003763 5.8e-40 168.3 114 81.6
THA.LOC104812959 Tarenaya hassleriana HOM05D002794 ORTHO05D003763 1.0e-39 167.5 114 79.8
Carub.0007s2870 Capsella rubella HOM05D002794 ORTHO05D003763 1.9e-38 163.3 114 79.8
Glyma.13G241800 Glycine max HOM05D002794 ORTHO05D003763 4.6e-37 158.7 118 72.9
Glyma.15G071600 Glycine max HOM05D002794 ORTHO05D003763 4.6e-37 158.7 118 72.9
Sed0016399 Sechium edule HOM05D002794 ORTHO05D003763 4.6e-37 158.7 114 76.3
ClCG11G010460 Citrullus lanatus HOM05D002794 ORTHO05D003763 7.9e-37 157.9 114 75.4
Ciclev10014734m.g Citrus clementina HOM05D002794 ORTHO05D003763 1.0e-36 157.5 114 73.7
Manes.16G024600 Manihot esculenta HOM05D002794 ORTHO05D003763 1.8e-36 156.8 114 73.7
Manes.17G042900 Manihot esculenta HOM05D002794 ORTHO05D003763 1.8e-36 156.8 114 73.7
Phvul.006G188200 Phaseolus vulgaris HOM05D002794 ORTHO05D003763 1.8e-36 156.8 114 73.7
Haze_06521 Corylus avellana HOM05D002794 ORTHO05D003763 3.9e-36 155.6 114 72.8
MELO3C008690.2 Cucumis melo HOM05D002794 ORTHO05D003763 3.9e-36 155.6 114 74.6
Glyma.13G182600 Glycine max HOM05D002794 ORTHO05D003763 3.9e-36 155.6 118 71.2
Psat6g214160 Pisum sativum HOM05D002794 ORTHO05D003763 3.9e-36 155.6 114 73.7
THA.LOC104812811 Tarenaya hassleriana HOM05D002794 ORTHO05D003763 3.9e-36 155.6 116 76.7
TPR.G12067 Trifolium pratense HOM05D002794 ORTHO05D003763 3.9e-36 155.6 114 73.7
COL.COLO4_31514 Corchorus olitorius HOM05D002794 ORTHO05D003763 5.1e-36 155.2 114 72.8
Duzib160G0262 Durio zibethinus HOM05D002794 ORTHO05D003763 5.1e-36 155.2 114 72.8
Duzib192G0647 Durio zibethinus HOM05D002794 ORTHO05D003763 5.1e-36 155.2 114 72.8
Duzib235G0583 Durio zibethinus HOM05D002794 ORTHO05D003763 5.1e-36 155.2 114 72.8
VMungo0540G1808 Vigna mungo HOM05D002794 ORTHO05D003763 5.1e-36 155.2 114 72.8
Atru.chr10.1951 Acer truncatum HOM05D002794 ORTHO05D003763 6.7e-36 154.8 114 72.8
Nitab4.5_0003063g0060 Nicotiana tabacum HOM05D002794 ORTHO05D003763 6.7e-36 154.8 114 72.8
Nitab4.5_0003668g0030 Nicotiana tabacum HOM05D002794 ORTHO05D003763 6.7e-36 154.8 114 72.8
GSVIVG01002655001 Vitis vinifera HOM05D002794 ORTHO05D003763 6.7e-36 154.8 118 70.3
Migut.H01505 Erythranthe guttata HOM05D002794 ORTHO05D003763 8.7e-36 154.5 114 72.8
Sed0014333 Sechium edule HOM05D002794 ORTHO05D003763 8.7e-36 154.5 114 74.6
CiPaw.10G045900 Carya illinoinensis HOM05D002794 ORTHO05D003763 1.1e-35 154.1 118 71.2
CsaV3_2G009900 Cucumis sativus L. HOM05D002794 ORTHO05D003763 1.1e-35 154.1 114 73.7
Peaxi162Scf01021g00126 Petunia axillaris HOM05D002794 ORTHO05D003763 1.1e-35 154.1 114 73.7
TWI63G1386 Tripterygium wilfordii HOM05D002794 ORTHO05D003763 1.1e-35 154.1 114 72.8
Gohir.A06G125702 Gossypium hirsutum HOM05D002794 ORTHO05D003763 1.5e-35 153.7 114 71.9
Gohir.D06G130400 Gossypium hirsutum HOM05D002794 ORTHO05D003763 1.5e-35 153.7 114 71.9
Gorai.010G152200 Gossypium raimondii HOM05D002794 ORTHO05D003763 1.5e-35 153.7 114 71.9
Medtr4g089085 Medicago truncatula HOM05D002794 ORTHO05D003763 1.5e-35 153.7 107 76.6
Prupe.4G042600 Prunus persica HOM05D002794 ORTHO05D003763 1.5e-35 153.7 114 71.9
Cc02_g12900 Coffea canephora HOM05D002794 ORTHO05D003763 1.9e-35 153.3 114 72.8
Lj6g0005762 Lotus japonicus HOM05D002794 ORTHO05D003763 1.9e-35 153.3 118 70.3
Oeu050833.1 Olea europaea HOM05D002794 ORTHO05D003763 1.9e-35 153.3 114 71.9
Thecc.06G191900 Theobroma cacao HOM05D002794 ORTHO05D003763 1.9e-35 153.3 114 71.9
Peaxi162Scf01163g00119 Petunia axillaris HOM05D002794 ORTHO05D003763 2.5e-35 152.9 114 71.9
SGA_v2.0_scaffold22G09776 Striga asiatica HOM05D002794 ORTHO05D003763 2.5e-35 152.9 114 72.8
TWI38G2081 Tripterygium wilfordii HOM05D002794 ORTHO05D003763 2.5e-35 152.9 114 71.9
CiPaw.09G055200 Carya illinoinensis HOM05D002794 ORTHO05D003763 3.3e-35 152.5 118 70.3
Ca_25735_v3 Cicer arietinum L. HOM05D002794 ORTHO05D003763 3.3e-35 152.5 118 70.3
Sopen03g002520 Solanum pennellii HOM05D002794 ORTHO05D003763 3.3e-35 152.5 114 71.9
PGSC0003DMG400026857 Solanum tuberosum HOM05D002794 ORTHO05D003763 3.3e-35 152.5 114 71.9
Oeu016115.2 Olea europaea HOM05D002794 ORTHO05D003763 4.3e-35 152.1 114 71.9
CSS0000580 Camellia sinensis var. sinensis HOM05D002794 ORTHO05D003763 5.7e-35 151.8 118 69.5
Potri.011G047600 Populus trichocarpa HOM05D002794 ORTHO05D003763 5.7e-35 151.8 114 71.9
Solyc03g006520.3 Solanum lycopersicum HOM05D002794 ORTHO05D003763 7.4e-35 151.4 114 71.1
Nn1g04005 Nelumbo nucifera HOM05D002794 ORTHO05D003763 9.7e-35 151.0 118 69.5
Nn1g06626 Nelumbo nucifera HOM05D002794 ORTHO05D003763 9.7e-35 151.0 118 70.3
Sabra04G0023900 Salix brachista HOM05D002794 ORTHO05D003763 9.7e-35 151.0 114 71.9
Potri.004G039000 Populus trichocarpa HOM05D002794 ORTHO05D003763 1.3e-34 150.6 107 75.7
Lalb_Chr05g0218331 Lupinus albus HOM05D002794 ORTHO05D003763 1.6e-34 150.2 119 69.7
BcaB03g11685 Brassica carinata HOM05D002794 ORTHO05D003763 2.2e-34 149.8 94 87.2
Hma1.2p1_1719F.1_g299220 Hydrangea macrophylla HOM05D002794 ORTHO05D003763 2.2e-34 149.8 114 71.9
Solyc02g078610.4 Solanum lycopersicum HOM05D002794 ORTHO05D003763 2.2e-34 149.8 114 71.1
Sopen02g023470 Solanum pennellii HOM05D002794 ORTHO05D003763 2.2e-34 149.8 114 71.1
EL10Ac8g20333 Beta vulgaris HOM05D002794 ORTHO05D003763 2.8e-34 149.4 114 70.2
CSS0002732 Camellia sinensis var. sinensis HOM05D002794 ORTHO05D003763 2.8e-34 149.4 119 70.6
CSS0042545 Camellia sinensis var. sinensis HOM05D002794 ORTHO05D003763 2.8e-34 149.4 119 70.6
CARHR228380 Cardamine hirsuta HOM05D002794 ORTHO05D003763 2.8e-34 149.4 94 88.3
RcHm_v2.0_Chr5g0007761 Rosa chinensis HOM05D002794 ORTHO05D003763 2.8e-34 149.4 114 70.2
PGSC0003DMG400022432 Solanum tuberosum HOM05D002794 ORTHO05D003763 2.8e-34 149.4 114 70.2
vmacro03843 Vaccinium macrocarpon HOM05D002794 ORTHO05D003763 2.8e-34 149.4 114 71.1
CANSAT35G1204 Cannabis sativa HOM05D002794 ORTHO05D003763 3.7e-34 149.1 118 70.3
CAN.G1627.21 Capsicum annuum HOM05D002794 ORTHO05D003763 3.7e-34 149.1 114 70.2
Sabra11G0033000 Salix brachista HOM05D002794 ORTHO05D003763 3.7e-34 149.1 107 74.8
A08p15050 Brassica napus HOM05D002794 ORTHO05D003763 4.8e-34 148.7 94 87.2
BraA08t33486Z Brassica rapa HOM05D002794 ORTHO05D003763 4.8e-34 148.7 94 87.2
QL05p039258 Quercus lobata HOM05D002794 ORTHO05D003763 4.8e-34 148.7 118 68.6
vmacro15890 Vaccinium macrocarpon HOM05D002794 ORTHO05D003763 4.8e-34 148.7 114 70.2
HanXRQChr16g0518241 Helianthus annuus HOM05D002794 ORTHO05D003763 8.2e-34 147.9 114 71.9
Hund23693 Selenicereus undatus HOM05D002794 ORTHO05D003763 8.2e-34 147.9 118 68.6
Lsat_1_v5_gn_1_127401 Lactuca sativa HOM05D002794 ORTHO05D003763 1.1e-33 147.5 114 71.9
BcaC01g00687 Brassica carinata HOM05D002794 ORTHO05D003763 1.4e-33 147.1 93 87.1
BolC3t20597H Brassica oleracea HOM05D002794 ORTHO05D003763 1.4e-33 147.1 93 87.1
Eucgr.D00651 Eucalyptus grandis HOM05D002794 ORTHO05D003763 1.4e-33 147.1 119 68.9
Lalb_Chr09g0327551 Lupinus albus HOM05D002794 ORTHO05D003763 1.8e-33 146.7 119 68.1
TAR624G1447 Trochodendron aralioides HOM05D002794 ORTHO05D003763 1.8e-33 146.7 118 66.9
RhsimUnG0043800 Rhododendron simsii HOM05D002794 ORTHO05D003763 2.4e-33 146.4 114 69.3
C03p83140 Brassica napus HOM05D002794 ORTHO05D003763 3.1e-33 146.0 93 86.0
Lalb_Chr16g0383541 Lupinus albus HOM05D002794 ORTHO05D003763 3.1e-33 146.0 121 66.9
Lj2C286T5 Lonicera japonica HOM05D002794 ORTHO05D003763 4.1e-33 145.6 115 70.4
HanXRQChr04g0097251 Helianthus annuus HOM05D002794 ORTHO05D003763 5.3e-33 145.2 114 70.2
MBI18_g17022_MAGBIO Magnolia biondii HOM05D002794 ORTHO05D003763 6.9e-33 144.8 118 66.1
Rhsim02G0123600 Rhododendron simsii HOM05D002794 ORTHO05D003763 6.9e-33 144.8 116 69.8
Ah.09g235770 Amaranthus hybridus HOM05D002794 ORTHO05D003763 1.2e-32 144.1 116 69.0
Hund21250 Selenicereus undatus HOM05D002794 ORTHO05D003763 1.2e-32 144.1 114 67.5
Ah.14g089250 Amaranthus hybridus HOM05D002794 ORTHO05D003763 3.4e-32 142.5 116 68.1
DCAR_004112 Daucus carota HOM05D002794 ORTHO05D003763 4.5e-32 142.1 114 68.4
Carub.0006s3292 Capsella rubella HOM05D002794 ORTHO05D003763 5.9e-32 141.7 102 73.5
CDE02G3438 Ceratophyllum demersum HOM05D002794 ORTHO05D003763 7.7e-32 141.4 119 68.1
CDE08G0397 Ceratophyllum demersum HOM05D002794 ORTHO05D003763 7.7e-32 141.4 119 68.1
PGR042G0244 Punica granatum HOM05D002794 ORTHO05D003763 1.3e-31 140.6 120 66.7
arahy.Tifrunner.gnm1.ann1.IR33XW Arachis hypogaea HOM05D002794 ORTHO05D003763 2.9e-31 139.4 119 65.5
FAN16G3580 Fragaria x ananassa HOM05D002794 ORTHO05D003763 3.8e-31 139.0 110 67.3
FAN21G3653 Fragaria x ananassa HOM05D002794 ORTHO05D003763 3.8e-31 139.0 110 67.3
FAN25G2654 Fragaria x ananassa HOM05D002794 ORTHO05D003763 3.8e-31 139.0 110 67.3
Psat1g205880 Pisum sativum HOM05D002794 ORTHO05D003763 6.5e-31 138.3 115 67.8
TPR.G29054 Trifolium pratense HOM05D002794 ORTHO05D003763 6.5e-31 138.3 119 66.4
AUR62016968 Chenopodium quinoa HOM05D002794 ORTHO05D003763 1.1e-30 137.5 103 69.9
Nitab4.5_0001833g0140 Nicotiana tabacum HOM05D002794 ORTHO05D003763 2.5e-30 136.3 146 56.8
Hma1.2p1_0191F.1_g083110 Hydrangea macrophylla HOM05D002794 ORTHO05D003763 3.2e-30 136.0 146 56.8
SEGI_02703 Sequoiadendron giganteum HOM05D002794 ORTHO05D003763 3.2e-30 136.0 119 65.5
SEGI_11447 Sequoiadendron giganteum HOM05D002794 ORTHO05D003763 3.2e-30 136.0 119 65.5
arahy.Tifrunner.gnm1.ann1.XZLA7I Arachis hypogaea HOM05D002794 ORTHO05D003763 4.2e-30 135.6 119 64.7
Ca_00324_v3 Cicer arietinum L. HOM05D002794 ORTHO05D003763 5.5e-30 135.2 117 67.5
PSO675G3577 Papaver somniferum HOM05D002794 ORTHO05D003763 5.5e-30 135.2 112 66.1
Medtr2g013350 Medicago truncatula HOM05D002794 ORTHO05D003763 7.2e-30 134.8 116 68.1
Actinidia01901 Actinidia chinensis HOM05D002794 ORTHO05D003763 9.4e-30 134.4 107 72.0
HPP92_014808 Vanilla planifolia HOM05D002794 ORTHO05D003763 9.4e-30 134.4 120 64.2
FvH4_3g04740 Fragaria vesca HOM05D002794 ORTHO05D003763 1.2e-29 134.0 110 67.3
FAN11G0433 Fragaria x ananassa HOM05D002794 ORTHO05D003763 1.2e-29 134.0 110 67.3
Lj4g0023033 Lotus japonicus HOM05D002794 ORTHO05D003763 4.6e-29 132.1 118 62.7
Cfa004795 Carpinus fangiana HOM05D002794 ORTHO05D003763 6.1e-29 131.7 115 66.1
MD10G1297600 Malus domestica HOM05D002794 ORTHO05D003763 1.4e-28 130.6 114 63.2
Aqoxy5G00583 Aquilegia oxysepala HOM05D002794 ORTHO05D003763 5.1e-28 128.6 123 61.0
Aqoxy3G03900 Aquilegia oxysepala HOM05D002794 ORTHO05D003763 6.7e-28 128.3 123 61.0
MD05G1318200 Malus domestica HOM05D002794 ORTHO05D003763 6.7e-28 128.3 114 63.2
TAR626G0204 Trochodendron aralioides HOM05D002794 ORTHO05D003763 2.8e-26 122.9 122 60.7
Nitab4.5_0000960g0150 Nicotiana tabacum HOM05D002794 ORTHO05D003763 4.8e-26 122.1 114 63.2
Os02g0827300 Oryza sativa ssp. japonica HOM05D002794 ORTHO05D003763 8.2e-26 121.3 118 57.6
Nitab4.5_0007957g0040 Nicotiana tabacum HOM05D002794 ORTHO05D003763 1.1e-25 120.9 115 62.6
Zm00001eb229010 Zea mays HOM05D002794 ORTHO05D003763 1.4e-25 120.6 119 60.5
COL.COLO4_31110 Corchorus olitorius HOM05D002794 ORTHO05D003763 1.8e-25 120.2 111 64.0
AagrBONN_evm.TU.Sc2ySwM_344.3345 Anthoceros agrestis HOM05D002794 ORTHO05D003763 3.1e-25 119.4 111 59.5
Mapoly0051s0020 Marchantia polymorpha HOM05D002794 ORTHO05D003763 5.3e-25 118.6 113 57.5
Aqoxy7G01746 Aquilegia oxysepala HOM05D002794 ORTHO05D003763 2.2e-23 113.2 110 60.0
ECA248G2629 Erigeron canadensis HOM05D002794 ORTHO05D003763 5.0e-23 112.1 116 58.6
PSO541G2705 Papaver somniferum HOM05D002794 ORTHO05D003763 5.0e-23 112.1 109 57.8
RcHm_v2.0_Chr2g0163041 Rosa chinensis HOM05D002794 ORTHO05D003763 7.2e-22 108.2 117 59.0
Zm00001eb271720 Zea mays HOM05D002794 ORTHO05D003763 9.4e-22 107.8 119 56.3
Pp3c14_10510 Physcomitrium patens HOM05D002794 ORTHO05D003763 3.6e-21 105.9 114 51.8
Cpa.g.sc1117.1 Carica papaya HOM05D002794 ORTHO05D003763 7.9e-21 104.8 74 73.0
Pp3c17_13490 Physcomitrium patens HOM05D002794 ORTHO05D003763 1.4e-20 104.0 114 50.9
CBR_g29963 Chara braunii HOM05D002794 ORTHO05D003763 3.0e-20 102.8 109 54.1
Rhsim07G0122000 Rhododendron simsii HOM05D002794 ORTHO05D003763 8.8e-20 101.3 102 58.8
vmacro23256 Vaccinium macrocarpon HOM05D002794 ORTHO05D003763 3.3e-19 99.4 102 55.9
Dinv07528 Davidia involucrata HOM05D002794 ORTHO05D003763 4.4e-19 99.0 81 66.7
vmacro04586 Vaccinium macrocarpon HOM05D002794 ORTHO05D003763 5.7e-19 98.6 102 53.9
Peaxi162Scf00535g00054 Petunia axillaris HOM05D002794 ORTHO05D003763 2.2e-18 96.7 116 52.6
Peaxi162Scf00535g00058 Petunia axillaris HOM05D002794 ORTHO05D003763 2.2e-18 96.7 116 52.6
Peaxi162Scf22083g00001 Petunia axillaris HOM05D002794 ORTHO05D003763 2.2e-18 96.7 116 52.6
FvH4_6g45300 Fragaria vesca HOM05D002794 ORTHO05D003763 6.3e-18 95.1 102 57.8
BcaC06g30670 Brassica carinata HOM05D002794 ORTHO05D003763 1.8e-17 93.6 114 57.0
Ciclev10006607m.g Citrus clementina HOM05D002794 ORTHO05D003763 4.1e-17 92.4 98 59.2
FAN02G3067 Fragaria x ananassa HOM05D002794 ORTHO05D003763 5.3e-17 92.0 102 56.9
FAN14G4862 Fragaria x ananassa HOM05D002794 ORTHO05D003763 5.3e-17 92.0 102 56.9
Glyma.07G193967 Glycine max HOM05D002794 ORTHO05D003763 5.3e-17 92.0 118 50.0
Lj1g0004029 Lotus japonicus HOM05D002794 ORTHO05D003763 2.6e-16 89.7 80 63.8
DCAR_001736 Daucus carota HOM05D002794 ORTHO05D003763 1.0e-15 87.8 107 52.3
Rhsim02G0211400 Rhododendron simsii HOM05D002794 ORTHO05D003763 2.9e-15 86.3 101 54.5
AUR62014781 Chenopodium quinoa HOM05D002794 ORTHO05D003763 3.2e-14 82.8 117 45.3
Rhsim08G0091600 Rhododendron simsii HOM05D002794 ORTHO05D003763 1.5e-11 73.9 107 46.7
Atru.chr4.2241 Acer truncatum HOM05D002794 ORTHO05D003763 1.1e-09 67.8 109 48.6
BolC7t45629H Brassica oleracea HOM05D002794 ORTHO05D033564 1.1e-09 67.8 57 68.4
ATR0006G055 Amborella trichopoda HOM05D002794 ORTHO05D003763 1.6e-08 63.9 51 64.7
SalBow3G1823 Salvia bowleyana HOM05D002794 ORTHO05D003763 6.5e-07 58.5 39 71.8
Rhsim02G0211700 Rhododendron simsii HOM05D002794 ORTHO05D003763 1.5e-06 57.4 64 54.7
BcaC08g45977 Brassica carinata HOM05D014007 ORTHO05D016107 1.9e-06 57.0 91 42.9


User provided reference genes

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