Gene: AT1G11520

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G11520
  • Transcript Identifier AT1G11520.1
  • Gene Type Coding gene
  • Location Chr1 : 3873029-3873619 : positive

Gene Family Information

  • ID HOM05D002794
  • #Genes/#Species 248/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G11520.1
  • uniprot Q9LPY3

Descriptions

  • Description pliceosome associated protein-like protein
  • Computational description pliceosome associated protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: proline-rich spliceosome-associated (PSP) family protein (TAIR:AT4G21660.2); Has 139 Blast hits to 132 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IBA
Gene OntologymRNA splicing, via spliceosome1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
Gene Ontologychloroplast2
GO:0005689
IBA
Gene OntologyU12-type spliceosomal complex1
GO:0005684
IBA
Gene OntologyU2-type spliceosomal complex1
GO:0005686
IBA
Gene OntologyU2 snRNP1
GO:0071013
IBA
Gene Ontologycatalytic step 2 spliceosome1
GO:0071011
IBA
Gene Ontologyprecatalytic spliceosome1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
No InterPro domains detected for this gene.
Mapman id Description
35.1 not assigned.annotated