Gene: Pp3c17_13490

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c17_13490
  • Transcript Identifier Pp3c17_13490V3.1
  • Gene Type Coding gene
  • Location Chr17 : 9442024-9448937 : negative

Gene Family Information

  • ID HOM05D002794
  • #Genes/#Species 248/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c17_13490V3.1
  • pacid 32906271
  • alias Phypa_132792
  • alias Pp1s98_7V6
  • alias Phpat.017G045800
  • uniprot A0A2K1J3S1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IBA
GOA DatabasemRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G21660

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0071013
IBA
GOA Databasecatalytic step 2 spliceosome
GO:0071011
IBA
GOA Databaseprecatalytic spliceosome
GO:0005689
IBA
GOA DatabaseU12-type spliceosomal complex
GO:0005686
IBA
GOA DatabaseU2 snRNP
GO:0005684
IBA
GOA DatabaseU2-type spliceosomal complex
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G11520

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007180 Domain of unknown function DUF382
IPR006568 PSP, proline-rich
Mapman id Description
16.2.1.2.4.2 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.component SF3B2