Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G43080 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 9.7e-138 493.4 241 100.0
AL1G47030 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 3.2e-72 275.8 149 87.2
AT1G32750 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 3.5e-71 272.3 149 85.9
Carub.0001s3108 Capsella rubella HOM05D001937 ORTHO05D003828 3.5e-71 272.3 149 85.2
CARHR032130 Cardamine hirsuta HOM05D001937 ORTHO05D003828 1.0e-70 270.8 149 84.6
Aa31LG2G13230 Aethionema arabicum HOM05D001937 ORTHO05D003828 1.7e-70 270.0 149 85.2
Sp1g28210 Schrenkiella parvula HOM05D001937 ORTHO05D003828 5.6e-69 265.0 149 83.2
BcaB04g17964 Brassica carinata HOM05D001937 ORTHO05D003828 6.2e-68 261.5 149 82.6
CARHR094480 Cardamine hirsuta HOM05D001937 ORTHO05D003828 2.4e-67 259.6 149 83.2
Thhalv10006532m.g Eutrema salsugineum HOM05D001937 ORTHO05D003828 5.3e-67 258.5 149 81.9
AT3G19040 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 9.0e-67 257.7 149 81.2
AL3G32430 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 7.6e-66 254.6 149 80.5
BcaC07g37602 Brassica carinata HOM05D001937 ORTHO05D003828 1.3e-65 253.8 149 80.5
A08p09140 Brassica napus HOM05D001937 ORTHO05D003828 1.3e-65 253.8 149 80.5
BolC8t47960H Brassica oleracea HOM05D001937 ORTHO05D003828 1.3e-65 253.8 149 80.5
BraA08t32916Z Brassica rapa HOM05D001937 ORTHO05D003828 1.3e-65 253.8 149 80.5
Sp3g17140 Schrenkiella parvula HOM05D001937 ORTHO05D003828 1.4e-64 250.4 149 78.5
BraA01t03625Z Brassica rapa HOM05D001937 ORTHO05D003828 3.2e-64 249.2 149 78.5
BcaB04g20722 Brassica carinata HOM05D001937 ORTHO05D003828 2.1e-63 246.5 149 77.9
BcaC09g48870 Brassica carinata HOM05D001937 ORTHO05D003828 2.3e-62 243.0 149 77.2
C01p44990 Brassica napus HOM05D001937 ORTHO05D003828 2.3e-62 243.0 149 77.2
A01p35430 Brassica napus HOM05D001937 ORTHO05D003828 1.5e-61 240.4 149 75.8
BolC1t04467H Brassica oleracea HOM05D001937 ORTHO05D003828 1.5e-61 240.4 149 76.5
THA.LOC104811101 Tarenaya hassleriana HOM05D001937 ORTHO05D003828 1.9e-61 240.0 149 75.2
Manes.07G036600 Manihot esculenta HOM05D001937 ORTHO05D003828 6.4e-57 224.9 149 71.1
Ciclev10004125m.g Citrus clementina HOM05D001937 ORTHO05D003828 8.4e-57 224.6 149 71.8
Glyma.09G215000 Glycine max HOM05D001937 ORTHO05D003828 8.4e-57 224.6 158 66.5
VMungo1215G1229 Vigna mungo HOM05D001937 ORTHO05D003828 1.1e-56 224.2 158 66.5
Lj2g0019889 Lotus japonicus HOM05D001937 ORTHO05D003828 1.9e-56 223.4 158 64.6
Lalb_Chr05g0215381 Lupinus albus HOM05D001937 ORTHO05D003828 1.9e-56 223.4 158 66.5
TWI14G0424 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 1.9e-56 223.4 157 66.2
Glyma.04G123500 Glycine max HOM05D001937 ORTHO05D003828 2.4e-56 223.0 158 65.2
Prupe.1G559000 Prunus persica HOM05D001937 ORTHO05D003828 4.2e-56 222.2 158 66.5
Phvul.002G127400 Phaseolus vulgaris HOM05D001937 ORTHO05D003828 5.5e-56 221.9 158 64.6
GSVIVG01020528001 Vitis vinifera HOM05D001937 ORTHO05D003828 5.5e-56 221.9 146 69.9
arahy.Tifrunner.gnm1.ann1.4559ZH Arachis hypogaea HOM05D001937 ORTHO05D003828 7.1e-56 221.5 157 66.2
arahy.Tifrunner.gnm1.ann1.9SH8TS Arachis hypogaea HOM05D001937 ORTHO05D003828 7.1e-56 221.5 157 66.2
Ca_25089_v3 Cicer arietinum L. HOM05D001937 ORTHO05D003828 9.3e-56 221.1 158 64.6
Dinv15990 Davidia involucrata HOM05D001937 ORTHO05D003828 9.3e-56 221.1 149 69.1
Duzib212G0078 Durio zibethinus HOM05D001937 ORTHO05D003828 9.3e-56 221.1 158 67.1
Sabra17G0032100 Salix brachista HOM05D001937 ORTHO05D003828 9.3e-56 221.1 158 67.1
Potri.007G113300 Populus trichocarpa HOM05D001937 ORTHO05D003828 1.6e-55 220.3 158 67.1
Sabra07G0092600 Salix brachista HOM05D001937 ORTHO05D003828 2.7e-55 219.5 158 67.1
Atru.chr3.3791 Acer truncatum HOM05D001937 ORTHO05D003828 3.5e-55 219.2 149 69.1
COL.COLO4_05351 Corchorus olitorius HOM05D001937 ORTHO05D003828 3.5e-55 219.2 157 67.5
Lj2C174G11 Lonicera japonica HOM05D001937 ORTHO05D003828 3.5e-55 219.2 149 69.1
Potri.017G047600 Populus trichocarpa HOM05D001937 ORTHO05D003828 3.5e-55 219.2 158 67.1
Gohir.A10G142200 Gossypium hirsutum HOM05D001937 ORTHO05D003828 6.0e-55 218.4 158 65.8
MD04G1047300 Malus domestica HOM05D001937 ORTHO05D003828 7.9e-55 218.0 158 65.2
FAN23G0892 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.3e-54 217.2 158 65.2
FAN28G0964 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.3e-54 217.2 158 65.2
Cc02_g20980 Coffea canephora HOM05D001937 ORTHO05D003828 1.8e-54 216.9 147 68.0
Gorai.011G137400 Gossypium raimondii HOM05D001937 ORTHO05D003828 2.3e-54 216.5 158 65.2
TPR.G17275 Trifolium pratense HOM05D001937 ORTHO05D003828 2.3e-54 216.5 158 63.9
CSS0032005 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 3.0e-54 216.1 149 67.1
CSS0037154 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 3.0e-54 216.1 149 67.1
FvH4_1g29900 Fragaria vesca HOM05D001937 ORTHO05D003828 3.0e-54 216.1 158 64.6
FAN11G3092 Fragaria x ananassa HOM05D001937 ORTHO05D003828 3.0e-54 216.1 158 63.9
FAN19G2543 Fragaria x ananassa HOM05D001937 ORTHO05D003828 3.0e-54 216.1 158 64.6
Lalb_Chr09g0325221 Lupinus albus HOM05D001937 ORTHO05D003828 3.0e-54 216.1 158 63.3
Aqoxy4G02410 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 5.1e-54 215.3 149 64.4
Nitab4.5_0005574g0040 Nicotiana tabacum HOM05D001937 ORTHO05D003828 5.1e-54 215.3 149 65.8
Psat2g142560 Pisum sativum HOM05D001937 ORTHO05D003828 5.1e-54 215.3 158 64.6
Thecc.04G168700 Theobroma cacao HOM05D001937 ORTHO05D003828 5.1e-54 215.3 158 64.6
Dinv24157 Davidia involucrata HOM05D001937 ORTHO05D003828 6.7e-54 214.9 149 66.4
Gohir.D10G124300 Gossypium hirsutum HOM05D001937 ORTHO05D003828 6.7e-54 214.9 158 65.2
Nitab4.5_0000244g0410 Nicotiana tabacum HOM05D001937 ORTHO05D003828 6.7e-54 214.9 149 66.4
TAR374G1188 Trochodendron aralioides HOM05D001937 ORTHO05D003828 6.7e-54 214.9 149 67.1
FAN26G2897 Fragaria x ananassa HOM05D001937 ORTHO05D003828 8.7e-54 214.5 158 64.6
Actinidia28033 Actinidia chinensis HOM05D001937 ORTHO05D003828 1.5e-53 213.8 149 65.1
vmacro19954 Vaccinium macrocarpon HOM05D001937 ORTHO05D003828 1.5e-53 213.8 149 67.1
RcHm_v2.0_Chr5g0013481 Rosa chinensis HOM05D001937 ORTHO05D003828 1.9e-53 213.4 158 63.9
FAN25G3599 Fragaria x ananassa HOM05D001937 ORTHO05D003828 3.3e-53 212.6 146 65.8
Oeu029676.1 Olea europaea HOM05D001937 ORTHO05D003828 4.3e-53 212.2 146 67.8
RcHm_v2.0_Chr3g0492481 Rosa chinensis HOM05D001937 ORTHO05D003828 4.3e-53 212.2 158 63.3
TWI23G0701 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 5.6e-53 211.8 158 62.7
FvH4_3g05980 Fragaria vesca HOM05D001937 ORTHO05D003828 7.4e-53 211.5 158 62.7
Solyc07g006820.4 Solanum lycopersicum HOM05D001937 ORTHO05D003828 9.6e-53 211.1 149 65.1
Sopen07g002920 Solanum pennellii HOM05D001937 ORTHO05D003828 9.6e-53 211.1 149 65.1
CAN.G584.7 Capsicum annuum HOM05D001937 ORTHO05D003828 1.6e-52 210.3 149 65.1
Peaxi162Scf00610g00377 Petunia axillaris HOM05D001937 ORTHO05D003828 2.1e-52 209.9 146 65.8
Medtr5g026660 Medicago truncatula HOM05D001937 ORTHO05D003828 2.8e-52 209.5 159 62.9
CANSAT11G1347 Cannabis sativa HOM05D001937 ORTHO05D003828 6.2e-52 208.4 158 62.7
PGR042G3669 Punica granatum HOM05D001937 ORTHO05D003828 6.2e-52 208.4 149 63.8
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 8.1e-52 208.0 158 62.7
Hund12383 Selenicereus undatus HOM05D001937 ORTHO05D003828 1.1e-51 207.6 146 66.4
AUR62002404 Chenopodium quinoa HOM05D001937 ORTHO05D003828 1.4e-51 207.2 149 63.8
MELO3C021095.2 Cucumis melo HOM05D001937 ORTHO05D003828 1.4e-51 207.2 158 64.6
HanXRQChr05g0162901 Helianthus annuus HOM05D001937 ORTHO05D003828 1.4e-51 207.2 149 64.4
DCAR_008727 Daucus carota HOM05D001937 ORTHO05D003828 1.8e-51 206.8 149 63.8
Sc25g0001620 Simmondsia chinensis HOM05D001937 ORTHO05D003828 1.8e-51 206.8 149 65.1
HanXRQChr06g0170531 Helianthus annuus HOM05D001937 ORTHO05D003828 2.4e-51 206.5 149 63.8
EL10Ac3g06089 Beta vulgaris HOM05D001937 ORTHO05D003828 4.0e-51 205.7 149 63.1
Nn1g09835 Nelumbo nucifera HOM05D001937 ORTHO05D003828 4.0e-51 205.7 149 63.8
CiPaw.05G030600 Carya illinoinensis HOM05D001937 ORTHO05D003828 6.9e-51 204.9 160 63.8
Rhsim05G0102300 Rhododendron simsii HOM05D001937 ORTHO05D003828 6.9e-51 204.9 152 64.5
ATR1120G087 Amborella trichopoda HOM05D001937 ORTHO05D003828 1.2e-50 204.1 149 64.4
Migut.B00560 Erythranthe guttata HOM05D001937 ORTHO05D003828 1.2e-50 204.1 149 65.1
Eucgr.I02627 Eucalyptus grandis HOM05D001937 ORTHO05D003828 1.2e-50 204.1 149 63.1
AUR62023793 Chenopodium quinoa HOM05D001937 ORTHO05D003828 1.5e-50 203.8 149 63.1
ClCG09G008530 Citrullus lanatus HOM05D001937 ORTHO05D003828 1.5e-50 203.8 158 63.9
CsaV3_7G026510 Cucumis sativus L. HOM05D001937 ORTHO05D003828 2.6e-50 203.0 158 63.9
PSO063G3818 Papaver somniferum HOM05D001937 ORTHO05D003828 2.6e-50 203.0 151 62.9
PSO782G5216 Papaver somniferum HOM05D001937 ORTHO05D003828 2.6e-50 203.0 151 62.9
Nn2g11723 Nelumbo nucifera HOM05D001937 ORTHO05D003828 5.8e-50 201.8 146 63.0
Zm00001eb386900 Zea mays HOM05D001937 ORTHO05D003828 5.8e-50 201.8 149 63.1
SGA_v2.0_scaffold83G26356 Striga asiatica HOM05D001937 ORTHO05D003828 1.0e-49 201.1 149 63.8
CDE08G0555 Ceratophyllum demersum HOM05D001937 ORTHO05D003828 2.2e-49 199.9 149 61.1
PSO675G8698 Papaver somniferum HOM05D001937 ORTHO05D003828 6.5e-49 198.4 151 60.3
unitig_46.g18832 Utricularia gibba HOM05D001937 ORTHO05D003828 6.5e-49 198.4 158 60.1
Lsat_1_v5_gn_6_102941 Lactuca sativa HOM05D001937 ORTHO05D003828 3.2e-48 196.1 149 60.4
Sed0011905 Sechium edule HOM05D001937 ORTHO05D003828 5.5e-48 195.3 158 62.0
ECA246G2336 Erigeron canadensis HOM05D001937 ORTHO05D003828 9.3e-48 194.5 149 59.7
HPP92_017203 Vanilla planifolia HOM05D001937 ORTHO05D003828 1.2e-47 194.1 149 60.4
DCAR_019148 Daucus carota HOM05D001937 ORTHO05D003828 3.1e-43 179.5 149 59.1
SMO118G0440 Selaginella moellendorffii HOM05D001937 ORTHO05D003828 2.2e-41 173.3 157 56.1
AagrBONN_evm.TU.Sc2ySwM_117.3403 Anthoceros agrestis HOM05D001937 ORTHO05D003828 7.9e-39 164.9 150 56.0
Mapoly0010s0177 Marchantia polymorpha HOM05D001937 ORTHO05D003828 7.9e-39 164.9 159 52.8
Pp3c14_1870 Physcomitrium patens HOM05D001937 ORTHO05D003828 1.8e-38 163.7 157 53.5
Pp3c10_350 Physcomitrium patens HOM05D001937 ORTHO05D003828 8.7e-38 161.4 157 52.9
CBR_g2821 Chara braunii HOM05D001937 ORTHO05D003828 1.4e-35 154.1 147 50.3
Aa31LG7G15320 Aethionema arabicum HOM05D001937 ORTHO05D003828 1.8e-30 137.1 71 87.3
Cpa.g.c38885 Carica papaya HOM05D001937 ORTHO05D003828 2.5e-24 116.7 70 77.1
Atru.chr8.1123 Acer truncatum HOM05D001937 ORTHO05D003828 7.9e-23 111.7 71 74.6
SHI37218 Sapria himalayana HOM05D001937 ORTHO05D003828 1.8e-22 110.5 72 66.7
Aqoxy3G01595 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 3.0e-22 109.8 77 64.9
Cpa.g.sc177.20 Carica papaya HOM05D001937 ORTHO05D003828 3.9e-22 109.4 87 60.9
Ciclev10004140m.g Citrus clementina HOM05D001937 ORTHO05D003828 1.5e-21 107.5 76 65.8
SEGI_13781 Sequoiadendron giganteum HOM05D001937 ORTHO05D003828 3.3e-21 106.3 70 65.7
SEGI_36763 Sequoiadendron giganteum HOM05D001937 ORTHO05D000001 1.9e-16 90.5 78 56.4
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 7.2e-16 88.6 65 56.9
Os06g0645800 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D003828 3.0e-14 83.2 70 54.3
PRCOL_00000485 Prasinoderma coloniale HOM05D001937 ORTHO05D003828 5.2e-14 82.4 158 26.6
Aqoxy3G01594 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 3.7e-12 76.3 65 55.4


User provided reference genes

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