Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G34910 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 9.6e-150 533.5 273 100.0
BcaB08g34420 Brassica carinata HOM05D001486 ORTHO05D004921 2.9e-21 106.7 122 52.5
BraA06t24267Z Brassica rapa HOM05D001486 ORTHO05D004921 6.5e-21 105.5 127 51.2
Carub.0001s1464 Capsella rubella HOM05D001486 ORTHO05D004921 6.5e-21 105.5 169 43.8
Thhalv10006562m.g Eutrema salsugineum HOM05D001486 ORTHO05D004921 6.5e-21 105.5 131 50.4
AL1G26870 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 8.4e-21 105.1 135 49.6
A06p10890 Brassica napus HOM05D001486 ORTHO05D004921 1.1e-20 104.8 127 51.2
AT1G14850 Arabidopsis thaliana HOM05D001486 ORTHO05D004921 1.4e-20 104.4 135 49.6
BraA09t41545Z Brassica rapa HOM05D001486 ORTHO05D004921 1.4e-20 104.4 131 49.6
C05p12830 Brassica napus HOM05D001486 ORTHO05D004921 2.5e-20 103.6 131 49.6
Gohir.D02G139700 Gossypium hirsutum HOM05D001486 ORTHO05D004921 3.2e-20 103.2 179 41.3
Gorai.005G157100 Gossypium raimondii HOM05D001486 ORTHO05D004921 3.2e-20 103.2 179 41.3
Medtr8g105290 Medicago truncatula HOM05D001486 ORTHO05D004921 3.2e-20 103.2 134 48.5
BcaC07g41534 Brassica carinata HOM05D001486 ORTHO05D004921 5.5e-20 102.4 131 48.9
BolC8t52091H Brassica oleracea HOM05D001486 ORTHO05D004921 5.5e-20 102.4 131 48.9
COL.COLO4_16588 Corchorus olitorius HOM05D001486 ORTHO05D004921 5.5e-20 102.4 177 40.7
Lalb_Chr05g0222211 Lupinus albus HOM05D001486 ORTHO05D004921 7.1e-20 102.1 134 49.3
Sp1g13290 Schrenkiella parvula HOM05D001486 ORTHO05D004921 7.1e-20 102.1 131 48.9
Aa31LG1G260 Aethionema arabicum HOM05D001486 ORTHO05D004921 9.3e-20 101.7 138 47.1
BcaC05g25406 Brassica carinata HOM05D001486 ORTHO05D004921 9.3e-20 101.7 131 49.6
BolC5t30028H Brassica oleracea HOM05D001486 ORTHO05D004921 9.3e-20 101.7 131 49.6
CARHR015390 Cardamine hirsuta HOM05D001486 ORTHO05D004921 9.3e-20 101.7 135 48.1
Cpa.g.sc2.194 Carica papaya HOM05D001486 ORTHO05D004921 9.3e-20 101.7 175 41.7
BcaB02g06554 Brassica carinata HOM05D001486 ORTHO05D004921 1.2e-19 101.3 131 48.9
A09p61750 Brassica napus HOM05D001486 ORTHO05D004921 1.2e-19 101.3 131 48.9
THA.LOC104823681 Tarenaya hassleriana HOM05D001486 ORTHO05D004921 1.6e-19 100.9 138 47.8
ECA233G0786 Erigeron canadensis HOM05D001486 ORTHO05D004921 2.1e-19 100.5 130 48.5
Psat7g007960 Pisum sativum HOM05D001486 ORTHO05D004921 2.1e-19 100.5 134 48.5
TPR.G19252 Trifolium pratense HOM05D001486 ORTHO05D004921 2.1e-19 100.5 134 49.3
arahy.Tifrunner.gnm1.ann1.WZE3XK Arachis hypogaea HOM05D001486 ORTHO05D004921 2.7e-19 100.1 171 41.5
Ca_17277_v3 Cicer arietinum L. HOM05D001486 ORTHO05D004921 2.7e-19 100.1 134 48.5
C08p45360 Brassica napus HOM05D001486 ORTHO05D004921 4.6e-19 99.4 131 48.1
Actinidia36627 Actinidia chinensis HOM05D001486 ORTHO05D004921 6.0e-19 99.0 177 40.1
Gohir.A03G115400 Gossypium hirsutum HOM05D001486 ORTHO05D004921 6.0e-19 99.0 140 45.0
vmacro10693 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 6.0e-19 99.0 173 41.0
Rhsim09G0089500 Rhododendron simsii HOM05D001486 ORTHO05D004921 7.9e-19 98.6 170 40.6
arahy.Tifrunner.gnm1.ann1.FK3VI9 Arachis hypogaea HOM05D001486 ORTHO05D004921 1.0e-18 98.2 171 40.9
Glyma.05G238800 Glycine max HOM05D001486 ORTHO05D004921 1.0e-18 98.2 134 47.8
Glyma.08G045900 Glycine max HOM05D001486 ORTHO05D004921 1.3e-18 97.8 134 47.8
RcHm_v2.0_Chr4g0443061 Rosa chinensis HOM05D001486 ORTHO05D004921 1.3e-18 97.8 183 38.3
Manes.17G083900 Manihot esculenta HOM05D001486 ORTHO05D004921 1.8e-18 97.4 153 43.1
Duzib251G0538 Durio zibethinus HOM05D001486 ORTHO05D004921 2.3e-18 97.1 140 42.9
FAN17G1739 Fragaria x ananassa HOM05D001486 ORTHO05D004921 2.3e-18 97.1 183 38.8
Lsat_1_v5_gn_8_46521 Lactuca sativa HOM05D001486 ORTHO05D004921 2.3e-18 97.1 135 43.7
Atru.chr11.925 Acer truncatum HOM05D001486 ORTHO05D004921 3.0e-18 96.7 176 40.3
Dinv07730 Davidia involucrata HOM05D001486 ORTHO05D004921 3.0e-18 96.7 140 45.0
QL03p035815 Quercus lobata HOM05D001486 ORTHO05D004921 3.0e-18 96.7 168 41.7
FvH4_4g33560 Fragaria vesca HOM05D001486 ORTHO05D004921 3.9e-18 96.3 183 38.3
FAN12G0503 Fragaria x ananassa HOM05D001486 ORTHO05D004921 3.9e-18 96.3 183 38.3
FAN22G2372 Fragaria x ananassa HOM05D001486 ORTHO05D004921 3.9e-18 96.3 183 38.3
HanXRQChr12g0363231 Helianthus annuus HOM05D001486 ORTHO05D004921 3.9e-18 96.3 134 44.8
Actinidia12394 Actinidia chinensis HOM05D001486 ORTHO05D004921 5.1e-18 95.9 140 43.6
DCAR_007329 Daucus carota HOM05D001486 ORTHO05D004921 5.1e-18 95.9 140 44.3
Dinv10475 Davidia involucrata HOM05D001486 ORTHO05D004921 5.1e-18 95.9 179 40.2
Lj3A864G85 Lonicera japonica HOM05D001486 ORTHO05D004921 5.1e-18 95.9 153 42.5
Thecc.02G292500 Theobroma cacao HOM05D001486 ORTHO05D004921 5.1e-18 95.9 140 44.3
CANSAT01G0610 Cannabis sativa HOM05D001486 ORTHO05D004921 6.7e-18 95.5 147 43.5
CAN.G601.2 Capsicum annuum HOM05D001486 ORTHO05D004921 6.7e-18 95.5 136 43.4
Duzib268G0355 Durio zibethinus HOM05D001486 ORTHO05D004921 6.7e-18 95.5 140 45.0
HanXRQChr08g0212501 Helianthus annuus HOM05D001486 ORTHO05D004921 6.7e-18 95.5 131 46.6
Hma1.2p1_0705F.1_g206910 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 6.7e-18 95.5 173 39.9
CDE07G0203 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 8.7e-18 95.1 152 40.8
Peaxi162Scf00376g00816 Petunia axillaris HOM05D001486 ORTHO05D004921 8.7e-18 95.1 136 45.6
MD16G1018500 Malus domestica HOM05D001486 ORTHO05D004921 1.1e-17 94.7 133 43.6
CSS0037038 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 1.5e-17 94.4 174 39.7
Ciclev10014036m.g Citrus clementina HOM05D001486 ORTHO05D004921 1.5e-17 94.4 140 42.9
FAN07G1595 Fragaria x ananassa HOM05D001486 ORTHO05D004921 1.9e-17 94.0 183 37.7
MD13G1020400 Malus domestica HOM05D001486 ORTHO05D004921 1.9e-17 94.0 133 44.4
Nn4g24372 Nelumbo nucifera HOM05D001486 ORTHO05D004921 1.9e-17 94.0 188 38.8
Sopen07g004030 Solanum pennellii HOM05D001486 ORTHO05D004921 1.9e-17 94.0 136 44.9
Lj4g0010019 Lotus japonicus HOM05D001486 ORTHO05D004921 2.5e-17 93.6 132 45.5
TAR629G0611 Trochodendron aralioides HOM05D001486 ORTHO05D004921 2.5e-17 93.6 140 44.3
Sabra08G0102800 Salix brachista HOM05D001486 ORTHO05D004921 3.3e-17 93.2 140 42.9
CDE06G1861 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 4.3e-17 92.8 152 40.8
Potri.008G134800 Populus trichocarpa HOM05D001486 ORTHO05D004921 4.3e-17 92.8 140 44.3
Solyc07g008160.3 Solanum lycopersicum HOM05D001486 ORTHO05D004921 4.3e-17 92.8 136 44.1
Haze_10881 Corylus avellana HOM05D001486 ORTHO05D004921 5.7e-17 92.4 172 40.7
SalBow2G2685 Salvia bowleyana HOM05D001486 ORTHO05D004921 7.4e-17 92.0 149 40.3
VMungo0251G0466 Vigna mungo HOM05D001486 ORTHO05D004921 7.4e-17 92.0 134 44.0
Phvul.002G321200 Phaseolus vulgaris HOM05D001486 ORTHO05D004921 9.6e-17 91.7 134 44.8
PGR142G2431 Punica granatum HOM05D001486 ORTHO05D004921 9.6e-17 91.7 154 41.6
Cc04_g10510 Coffea canephora HOM05D001486 ORTHO05D004921 1.3e-16 91.3 140 40.0
Prupe.1G333300 Prunus persica HOM05D001486 ORTHO05D004921 1.3e-16 91.3 133 42.9
CAN.G149.16 Capsicum annuum HOM05D001486 ORTHO05D004921 1.6e-16 90.9 136 41.9
Lalb_Chr09g0330891 Lupinus albus HOM05D001486 ORTHO05D004921 1.6e-16 90.9 134 46.3
Aqoxy3G03310 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 2.1e-16 90.5 139 41.7
Aqoxy7G03241 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 2.1e-16 90.5 139 43.2
TWI74G0959 Tripterygium wilfordii HOM05D001486 ORTHO05D004921 2.1e-16 90.5 141 41.1
Eucgr.G02106 Eucalyptus grandis HOM05D001486 ORTHO05D004921 2.8e-16 90.1 153 41.8
Ah.13g072990 Amaranthus hybridus HOM05D001486 ORTHO05D004921 3.7e-16 89.7 137 43.1
Hma1.2p1_0277F.1_g111740 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 3.7e-16 89.7 137 42.3
ATR0753G157 Amborella trichopoda HOM05D001486 ORTHO05D004921 6.2e-16 89.0 151 40.4
SGA_v2.0_scaffold23G10214 Striga asiatica HOM05D001486 ORTHO05D004921 6.2e-16 89.0 152 40.8
CiPaw.06G051900 Carya illinoinensis HOM05D001486 ORTHO05D004921 1.1e-15 88.2 173 38.2
unitig_27.g25160 Utricularia gibba HOM05D001486 ORTHO05D004921 1.1e-15 88.2 129 44.2
MSTRG.2128 Avicennia marina HOM05D001486 ORTHO05D004921 1.4e-15 87.8 152 38.8
SEGI_07920 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 1.8e-15 87.4 175 36.6
GSVIVG01011661001 Vitis vinifera HOM05D001486 ORTHO05D004921 1.8e-15 87.4 116 46.6
PSO063G3102 Papaver somniferum HOM05D001486 ORTHO05D004921 2.4e-15 87.0 148 39.2
PSO782G0822 Papaver somniferum HOM05D001486 ORTHO05D004921 2.4e-15 87.0 148 39.2
Migut.E00481 Erythranthe guttata HOM05D001486 ORTHO05D004921 4.1e-15 86.3 136 40.4
Oeu064208.1 Olea europaea HOM05D001486 ORTHO05D004921 4.1e-15 86.3 153 38.6
AUR62002589 Chenopodium quinoa HOM05D001486 ORTHO05D004921 5.3e-15 85.9 138 39.9
Sed0010499 Sechium edule HOM05D001486 ORTHO05D004921 9.0e-15 85.1 134 40.3
ClCG07G005610 Citrullus lanatus HOM05D001486 ORTHO05D004921 1.2e-14 84.7 134 39.6
Hund13366 Selenicereus undatus HOM05D001486 ORTHO05D004921 1.2e-14 84.7 158 36.7
AUR62030013 Chenopodium quinoa HOM05D001486 ORTHO05D004921 1.5e-14 84.3 138 39.1
MELO3C026441.2 Cucumis melo HOM05D001486 ORTHO05D004921 1.5e-14 84.3 134 39.6
HPP92_002282 Vanilla planifolia HOM05D001486 ORTHO05D004921 2.0e-14 84.0 136 38.2
CsaV3_5G015740 Cucumis sativus L. HOM05D001486 ORTHO05D004921 4.5e-14 82.8 134 38.8
EL10Ac3g06288 Beta vulgaris HOM05D001486 ORTHO05D004921 5.8e-14 82.4 138 39.1
Carub.0127s0003 Capsella rubella HOM05D001486 ORTHO05D004921 1.0e-13 81.6 125 43.2
Peaxi162Scf01152g00010 Petunia axillaris HOM05D001486 ORTHO05D004921 1.0e-13 81.6 193 35.8
Os06g0305200 Oryza sativa ssp. japonica HOM05D001486 ORTHO05D004921 1.7e-13 80.9 132 37.9
Zm00001eb009110 Zea mays HOM05D001486 ORTHO05D004921 1.7e-13 80.9 133 38.3
Peaxi162Scf00047g00710 Petunia axillaris HOM05D001486 ORTHO05D004921 1.1e-12 78.2 136 38.2
Pp3c8_3720 Physcomitrium patens HOM05D001486 ORTHO05D004921 2.7e-11 73.6 132 38.6
Peaxi162Scf01391g00116 Petunia axillaris HOM05D001486 ORTHO05D004921 3.5e-11 73.2 178 34.8
Sc11g0004180 Simmondsia chinensis HOM05D001486 ORTHO05D004921 3.5e-11 73.2 138 38.4
Mapoly0035s0137 Marchantia polymorpha HOM05D001486 ORTHO05D004921 1.3e-10 71.2 172 32.6
AagrBONN_evm.TU.Sc2ySwM_362.1455 Anthoceros agrestis HOM05D001486 ORTHO05D004921 3.0e-10 70.1 132 32.6
Peaxi162Scf01152g00113 Petunia axillaris HOM05D001486 ORTHO05D004921 3.0e-10 70.1 158 35.4
Zm00001eb399840 Zea mays HOM05D001486 ORTHO05D004921 3.9e-10 69.7 112 35.7


User provided reference genes

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