Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 6.6e-203 710.7 408 100.0
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 2.3e-179 632.5 408 82.8
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 1.5e-175 619.8 406 80.8
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 2.0e-175 619.4 414 80.9
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 7.1e-173 610.9 410 79.3
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 1.2e-172 610.1 408 78.7
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 1.2e-172 610.1 408 78.7
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 6.0e-172 607.8 409 79.2
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 6.0e-172 607.8 409 79.2
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 3.9e-171 605.1 408 78.2
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 3.3e-162 575.5 408 75.5
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 2.7e-156 555.8 424 75.5
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 2.0e-143 513.1 417 68.6
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 5.8e-135 485.0 392 68.9
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 5.5e-133 478.4 388 72.4
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 7.9e-132 474.6 371 72.2
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 1.0e-131 474.2 370 72.4
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 3.9e-131 472.2 400 63.2
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 3.9e-131 472.2 400 63.2
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 5.1e-131 471.9 371 73.3
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 1.5e-130 470.3 395 62.3
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.9e-130 469.9 397 62.7
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 3.3e-130 469.2 398 63.6
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 3.3e-130 469.2 375 65.9
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 5.7e-130 468.4 400 62.8
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 9.7e-130 467.6 394 64.0
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 2.8e-129 466.1 374 67.1
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 3.7e-129 465.7 366 64.8
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 2.4e-128 463.0 396 63.9
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 4.1e-128 462.2 426 60.1
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 6.9e-128 461.5 385 63.9
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 1.2e-127 460.7 367 72.2
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 3.4e-127 459.1 384 65.6
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 4.5e-127 458.8 371 69.0
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 5.9e-127 458.4 374 63.6
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 1.3e-126 457.2 388 64.7
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 1.3e-126 457.2 386 64.8
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 6.5e-126 454.9 404 60.9
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 6.5e-126 454.9 383 65.0
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 1.1e-125 454.1 374 64.7
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 1.9e-125 453.4 392 63.8
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 2.5e-125 453.0 283 84.8
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 4.6e-124 448.7 371 69.8
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 2.3e-123 446.4 407 58.5
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 6.7e-123 444.9 377 62.9
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 4.3e-122 442.2 397 59.9
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 5.7e-122 441.8 405 60.0
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 5.7e-122 441.8 387 67.4
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 8.2e-121 438.0 374 68.7
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 1.1e-120 437.6 388 63.1
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 1.4e-120 437.2 388 60.6
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 1.4e-120 437.2 393 60.6
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 2.4e-120 436.4 385 60.5
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 3.1e-120 436.0 387 64.9
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 3.1e-120 436.0 388 66.0
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 4.1e-120 435.6 393 61.3
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 6.9e-120 434.9 367 62.7
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 6.9e-120 434.9 392 61.5
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 9.1e-120 434.5 385 62.3
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 3.4e-119 432.6 375 68.3
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 5.9e-119 431.8 390 59.7
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 1.0e-118 431.0 389 59.9
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 2.2e-118 429.9 390 60.0
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 8.5e-118 427.9 375 62.4
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 4.2e-117 425.6 390 60.8
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 1.6e-116 423.7 323 71.8
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 2.7e-116 422.9 410 62.0
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 2.7e-116 422.9 363 66.1
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 2.7e-116 422.9 435 54.3
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 3.0e-115 419.5 390 59.7
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 2.0e-114 416.8 369 66.1
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 1.3e-113 414.1 366 61.2
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 1.1e-112 411.0 362 68.0
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.4e-112 410.6 402 57.0
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 1.8e-112 410.2 268 75.0
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.4e-112 409.8 405 57.5
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 1.5e-111 407.1 268 74.6
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 1.5e-111 407.1 450 53.1
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 1.6e-108 397.1 313 63.9
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 2.7e-108 396.4 292 75.0
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 6.1e-108 395.2 396 54.8
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 3.9e-107 392.5 262 74.0
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 8.8e-107 391.3 382 55.0
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 2.0e-106 390.2 375 56.5
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 5.7e-106 388.7 304 68.1
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 3.7e-105 386.0 221 83.3
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 4.1e-104 382.5 296 67.2
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 1.6e-103 380.6 301 65.4
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 3.5e-103 379.4 408 58.3
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 3.5e-103 379.4 284 75.7
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.3e-102 377.5 270 70.0
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 3.2e-101 372.9 377 53.8
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 8.8e-99 364.8 267 68.2
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 2.8e-97 359.8 362 55.5
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 8.3e-97 358.2 381 54.1
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 1.8e-91 340.5 219 75.8
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 2.6e-90 336.7 408 46.6
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 8.3e-89 331.6 254 69.3
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 2.7e-87 326.6 399 52.6
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 1.0e-86 324.7 385 56.9
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 1.3e-86 324.3 289 56.4
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 2.5e-85 320.1 366 55.5
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 8.3e-81 305.1 243 65.0
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 1.2e-79 301.2 376 51.9
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 2.9e-78 296.6 284 58.8
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 5.0e-78 295.8 294 56.5
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 5.8e-74 282.3 203 71.9
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 7.5e-74 282.0 140 94.3
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 2.6e-66 256.9 216 63.9
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 7.8e-63 245.4 264 49.6
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 8.6e-62 241.9 197 59.4
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 5.4e-56 222.6 260 51.9
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.9e-54 216.5 285 48.8
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 1.1e-43 181.8 181 47.5
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 9.9e-42 175.3 251 37.8
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 4.9e-33 146.4 197 39.1
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 3.0e-30 137.1 149 58.4
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 2.6e-26 124.0 146 47.3
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 9.0e-19 99.0 87 59.8
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 7.4e-13 79.3 43 74.4
Cpa.g.sc48.16 Carica papaya HOM05D006305 ORTHO05D007984 1.4e-11 75.1 86 53.5
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 2.2e-09 67.8 124 39.5
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 1.9e-08 64.7 34 76.5


User provided reference genes

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