Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G18360 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 4.1e-176 621.3 317 100.0
CARHR015390 Cardamine hirsuta HOM05D001486 ORTHO05D004921 5.9e-42 175.6 336 39.6
Carub.0001s1464 Capsella rubella HOM05D001486 ORTHO05D004921 7.7e-42 175.3 336 39.9
Aa31LG1G260 Aethionema arabicum HOM05D001486 ORTHO05D004921 1.0e-41 174.9 345 38.8
AT1G14850 Arabidopsis thaliana HOM05D001486 ORTHO05D004921 2.9e-41 173.3 336 39.0
BcaC07g41534 Brassica carinata HOM05D001486 ORTHO05D004921 3.8e-41 172.9 336 39.6
BolC8t52091H Brassica oleracea HOM05D001486 ORTHO05D004921 3.8e-41 172.9 336 39.6
BcaC05g25406 Brassica carinata HOM05D001486 ORTHO05D004921 6.5e-41 172.2 336 39.0
C05p12830 Brassica napus HOM05D001486 ORTHO05D004921 6.5e-41 172.2 336 39.0
BolC5t30028H Brassica oleracea HOM05D001486 ORTHO05D004921 6.5e-41 172.2 336 39.0
AL1G26870 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 1.1e-40 171.4 336 38.7
C08p45360 Brassica napus HOM05D001486 ORTHO05D004921 1.5e-40 171.0 336 39.0
BcaB08g34420 Brassica carinata HOM05D001486 ORTHO05D004921 1.9e-40 170.6 336 38.4
BraA09t41545Z Brassica rapa HOM05D001486 ORTHO05D004921 1.9e-40 170.6 336 39.0
Thhalv10006562m.g Eutrema salsugineum HOM05D001486 ORTHO05D004921 1.9e-40 170.6 336 39.0
A09p61750 Brassica napus HOM05D001486 ORTHO05D004921 2.5e-40 170.2 336 39.0
BcaB02g06554 Brassica carinata HOM05D001486 ORTHO05D004921 3.2e-40 169.9 336 38.7
A06p10890 Brassica napus HOM05D001486 ORTHO05D004921 4.2e-40 169.5 336 38.4
BraA06t24267Z Brassica rapa HOM05D001486 ORTHO05D004921 4.2e-40 169.5 336 38.4
Sp1g13290 Schrenkiella parvula HOM05D001486 ORTHO05D004921 2.1e-39 167.2 336 39.0
THA.LOC104823681 Tarenaya hassleriana HOM05D001486 ORTHO05D004921 8.8e-38 161.8 341 37.2
Atru.chr11.925 Acer truncatum HOM05D001486 ORTHO05D004921 3.1e-35 153.3 343 35.9
PSO063G3102 Papaver somniferum HOM05D001486 ORTHO05D004921 5.3e-35 152.5 338 35.5
Lalb_Chr09g0330891 Lupinus albus HOM05D001486 ORTHO05D004921 7.0e-35 152.1 343 35.3
QL03p035815 Quercus lobata HOM05D001486 ORTHO05D004921 7.0e-35 152.1 344 35.2
PSO782G0822 Papaver somniferum HOM05D001486 ORTHO05D004921 1.2e-34 151.4 338 35.8
arahy.Tifrunner.gnm1.ann1.FK3VI9 Arachis hypogaea HOM05D001486 ORTHO05D004921 1.6e-34 151.0 344 34.6
arahy.Tifrunner.gnm1.ann1.WZE3XK Arachis hypogaea HOM05D001486 ORTHO05D004921 1.6e-34 151.0 344 34.6
CiPaw.06G051900 Carya illinoinensis HOM05D001486 ORTHO05D004921 2.0e-34 150.6 344 34.6
COL.COLO4_16588 Corchorus olitorius HOM05D001486 ORTHO05D004921 3.5e-34 149.8 341 34.3
Lj4g0010019 Lotus japonicus HOM05D001486 ORTHO05D004921 4.5e-34 149.4 344 34.6
Oeu064208.1 Olea europaea HOM05D001486 ORTHO05D004921 4.5e-34 149.4 307 39.1
Haze_10881 Corylus avellana HOM05D001486 ORTHO05D004921 7.7e-34 148.7 344 34.9
FAN17G1739 Fragaria x ananassa HOM05D001486 ORTHO05D004921 7.7e-34 148.7 343 33.8
Lj1g0014898 Lotus japonicus HOM05D001486 ORTHO05D004921 7.7e-34 148.7 337 34.1
TAR629G0611 Trochodendron aralioides HOM05D001486 ORTHO05D004921 1.0e-33 148.3 344 34.9
Duzib251G0538 Durio zibethinus HOM05D001486 ORTHO05D004921 1.3e-33 147.9 341 33.7
Eucgr.G02106 Eucalyptus grandis HOM05D001486 ORTHO05D004921 1.3e-33 147.9 345 35.4
RcHm_v2.0_Chr4g0443061 Rosa chinensis HOM05D001486 ORTHO05D004921 1.3e-33 147.9 343 33.5
Thecc.02G292500 Theobroma cacao HOM05D001486 ORTHO05D004921 1.3e-33 147.9 341 34.0
TWI74G0959 Tripterygium wilfordii HOM05D001486 ORTHO05D004921 1.3e-33 147.9 344 35.2
Medtr8g105290 Medicago truncatula HOM05D001486 ORTHO05D004921 1.7e-33 147.5 344 34.3
PGR142G2431 Punica granatum HOM05D001486 ORTHO05D004921 1.7e-33 147.5 345 34.8
TPR.G19252 Trifolium pratense HOM05D001486 ORTHO05D004921 1.7e-33 147.5 344 34.3
HanXRQChr12g0363231 Helianthus annuus HOM05D001486 ORTHO05D004921 2.2e-33 147.1 330 35.8
Ca_17277_v3 Cicer arietinum L. HOM05D001486 ORTHO05D004921 3.8e-33 146.4 344 34.0
FvH4_4g33560 Fragaria vesca HOM05D001486 ORTHO05D004921 3.8e-33 146.4 343 33.5
Glyma.08G045900 Glycine max HOM05D001486 ORTHO05D004921 3.8e-33 146.4 344 33.7
Manes.17G083900 Manihot esculenta HOM05D001486 ORTHO05D004921 3.8e-33 146.4 344 34.6
Prupe.1G333300 Prunus persica HOM05D001486 ORTHO05D004921 3.8e-33 146.4 344 33.7
MELO3C026441.2 Cucumis melo HOM05D001486 ORTHO05D004921 8.5e-33 145.2 343 34.1
CsaV3_5G015740 Cucumis sativus L. HOM05D001486 ORTHO05D004921 8.5e-33 145.2 343 34.1
ECA233G0786 Erigeron canadensis HOM05D001486 ORTHO05D004921 8.5e-33 145.2 340 34.7
FAN12G0503 Fragaria x ananassa HOM05D001486 ORTHO05D004921 1.1e-32 144.8 343 33.2
Glyma.05G238800 Glycine max HOM05D001486 ORTHO05D004921 1.1e-32 144.8 344 33.4
Lalb_Chr05g0222211 Lupinus albus HOM05D001486 ORTHO05D004921 1.1e-32 144.8 342 33.9
Actinidia36627 Actinidia chinensis HOM05D001486 ORTHO05D004921 1.5e-32 144.4 343 34.7
Ciclev10014036m.g Citrus clementina HOM05D001486 ORTHO05D004921 1.5e-32 144.4 341 35.2
Actinidia12394 Actinidia chinensis HOM05D001486 ORTHO05D004921 2.5e-32 143.7 343 34.7
FAN07G1595 Fragaria x ananassa HOM05D001486 ORTHO05D004921 2.5e-32 143.7 343 32.9
FAN22G2372 Fragaria x ananassa HOM05D001486 ORTHO05D004921 2.5e-32 143.7 343 33.2
Phvul.002G321200 Phaseolus vulgaris HOM05D001486 ORTHO05D004921 2.5e-32 143.7 344 33.1
Cpa.g.sc2.194 Carica papaya HOM05D001486 ORTHO05D004921 3.2e-32 143.3 345 33.9
ClCG07G005610 Citrullus lanatus HOM05D001486 ORTHO05D004921 3.2e-32 143.3 342 33.9
MD13G1020400 Malus domestica HOM05D001486 ORTHO05D004921 3.2e-32 143.3 342 34.5
Nn4g24372 Nelumbo nucifera HOM05D001486 ORTHO05D004921 3.2e-32 143.3 342 35.4
Carub.0127s0003 Capsella rubella HOM05D001486 ORTHO05D004921 4.2e-32 142.9 301 37.2
DCAR_007329 Daucus carota HOM05D001486 ORTHO05D004921 4.2e-32 142.9 344 33.7
VMungo0251G0466 Vigna mungo HOM05D001486 ORTHO05D004921 4.2e-32 142.9 344 33.4
SalBow2G2685 Salvia bowleyana HOM05D001486 ORTHO05D004921 5.5e-32 142.5 342 34.2
CSS0037038 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 7.2e-32 142.1 340 34.1
Gohir.D02G139700 Gossypium hirsutum HOM05D001486 ORTHO05D004921 7.2e-32 142.1 341 33.4
HanXRQChr08g0212501 Helianthus annuus HOM05D001486 ORTHO05D004921 7.2e-32 142.1 337 34.4
Lj3A864G85 Lonicera japonica HOM05D001486 ORTHO05D004921 7.2e-32 142.1 344 33.4
Psat7g007960 Pisum sativum HOM05D001486 ORTHO05D004921 7.2e-32 142.1 344 33.4
Aqoxy3G03310 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 9.4e-32 141.7 341 33.7
CANSAT01G0610 Cannabis sativa HOM05D001486 ORTHO05D004921 1.2e-31 141.4 342 34.2
AUR62030013 Chenopodium quinoa HOM05D001486 ORTHO05D004921 1.2e-31 141.4 342 34.2
AUR62002589 Chenopodium quinoa HOM05D001486 ORTHO05D004921 1.6e-31 141.0 342 33.9
Dinv10475 Davidia involucrata HOM05D001486 ORTHO05D004921 1.6e-31 141.0 344 34.3
Duzib268G0355 Durio zibethinus HOM05D001486 ORTHO05D004921 1.6e-31 141.0 341 33.1
Gohir.A03G115400 Gossypium hirsutum HOM05D001486 ORTHO05D004921 1.6e-31 141.0 341 33.4
Gorai.005G157100 Gossypium raimondii HOM05D001486 ORTHO05D004921 1.6e-31 141.0 341 33.4
Sed0010499 Sechium edule HOM05D001486 ORTHO05D004921 1.6e-31 141.0 343 34.1
ATR0753G157 Amborella trichopoda HOM05D001486 ORTHO05D004921 2.1e-31 140.6 343 32.7
Aqoxy7G03241 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 2.7e-31 140.2 341 33.7
Dinv07730 Davidia involucrata HOM05D001486 ORTHO05D004921 3.6e-31 139.8 341 34.0
Os06g0305200 Oryza sativa ssp. japonica HOM05D001486 ORTHO05D004921 3.6e-31 139.8 352 32.7
Migut.E00481 Erythranthe guttata HOM05D001486 ORTHO05D004921 1.8e-30 137.5 344 34.0
Hund13366 Selenicereus undatus HOM05D001486 ORTHO05D004921 1.8e-30 137.5 343 34.1
SGA_v2.0_scaffold23G10214 Striga asiatica HOM05D001486 ORTHO05D004921 1.8e-30 137.5 343 34.4
Zm00001eb009110 Zea mays HOM05D001486 ORTHO05D004921 1.8e-30 137.5 352 32.1
Nitab4.5_0010421g0010 Nicotiana tabacum HOM05D001486 ORTHO05D004921 2.3e-30 137.1 339 33.3
EL10Ac3g06288 Beta vulgaris HOM05D001486 ORTHO05D004921 3.0e-30 136.7 343 32.9
MSTRG.2128 Avicennia marina HOM05D001486 ORTHO05D004921 4.0e-30 136.3 344 33.1
Hma1.2p1_0705F.1_g206910 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 4.0e-30 136.3 340 33.2
Sc11g0004180 Simmondsia chinensis HOM05D001486 ORTHO05D004921 4.0e-30 136.3 343 32.9
Ah.13g072990 Amaranthus hybridus HOM05D001486 ORTHO05D004921 5.2e-30 136.0 343 33.5
Sabra08G0102800 Salix brachista HOM05D001486 ORTHO05D004921 5.2e-30 136.0 343 32.7
Nitab4.5_0004576g0040 Nicotiana tabacum HOM05D001486 ORTHO05D004921 1.2e-29 134.8 339 33.0
Peaxi162Scf00376g00816 Petunia axillaris HOM05D001486 ORTHO05D004921 1.2e-29 134.8 343 32.9
Zm00001eb399840 Zea mays HOM05D001486 ORTHO05D004921 1.5e-29 134.4 352 31.0
CDE07G1854 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 4.4e-29 132.9 306 33.0
Sopen07g004030 Solanum pennellii HOM05D001486 ORTHO05D004921 4.4e-29 132.9 344 32.6
Lsat_1_v5_gn_8_46521 Lactuca sativa HOM05D001486 ORTHO05D004921 5.7e-29 132.5 342 32.2
Potri.008G134800 Populus trichocarpa HOM05D001486 ORTHO05D004921 5.7e-29 132.5 344 32.6
Solyc07g008160.3 Solanum lycopersicum HOM05D001486 ORTHO05D004921 9.8e-29 131.7 343 32.1
vmacro10693 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 1.3e-28 131.3 340 33.2
Peaxi162Scf01391g00116 Petunia axillaris HOM05D001486 ORTHO05D004921 2.8e-28 130.2 346 32.7
CAN.G149.16 Capsicum annuum HOM05D001486 ORTHO05D004921 3.7e-28 129.8 343 31.2
CAN.G601.2 Capsicum annuum HOM05D001486 ORTHO05D004921 1.1e-27 128.3 343 31.2
Cc04_g10510 Coffea canephora HOM05D001486 ORTHO05D004921 4.1e-27 126.3 341 32.0
Hma1.2p1_0277F.1_g111740 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 4.1e-27 126.3 312 33.3
SEGI_07920 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 4.1e-27 126.3 341 31.1
Rhsim09G0089500 Rhododendron simsii HOM05D001486 ORTHO05D004921 7.0e-27 125.6 340 32.6
HPP92_002282 Vanilla planifolia HOM05D001486 ORTHO05D004921 9.1e-27 125.2 337 31.8
Peaxi162Scf01152g00010 Petunia axillaris HOM05D001486 ORTHO05D004921 1.2e-26 124.8 328 31.7
Peaxi162Scf01152g00113 Petunia axillaris HOM05D001486 ORTHO05D004921 5.9e-26 122.5 328 32.6
Pp3c8_3720 Physcomitrium patens HOM05D001486 ORTHO05D004921 1.7e-25 120.9 351 29.9
Mapoly0035s0137 Marchantia polymorpha HOM05D001486 ORTHO05D004921 9.5e-24 115.2 348 29.3
RcHm_v2.0_Chr2g0167011 Rosa chinensis HOM05D001486 ORTHO05D004921 1.2e-21 108.2 278 32.0
AagrBONN_evm.TU.Sc2ySwM_362.1455 Anthoceros agrestis HOM05D001486 ORTHO05D004921 7.5e-21 105.5 343 29.2
MD16G1018500 Malus domestica HOM05D001486 ORTHO05D004921 1.1e-19 101.7 173 40.5
Peaxi162Scf00047g00710 Petunia axillaris HOM05D001486 ORTHO05D004921 1.1e-19 101.7 341 29.9
ECA247G0951 Erigeron canadensis HOM05D001486 ORTHO05D004921 3.0e-14 83.6 169 37.9
GSVIVG01011662001 Vitis vinifera HOM05D001486 ORTHO05D004921 2.7e-10 70.5 113 40.7
MD16G1018600 Malus domestica HOM05D001486 ORTHO05D004921 3.9e-09 66.6 113 38.9
unitig_27.g25159 Utricularia gibba HOM05D001486 ORTHO05D004921 4.3e-08 63.2 108 37.0


User provided reference genes

Program Settings