Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G32080 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 5.7e-127 457.6 231 100.0
AL1G26870 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 9.7e-103 377.1 230 85.7
AT1G14850 Arabidopsis thaliana HOM05D001486 ORTHO05D004921 2.8e-102 375.6 230 85.2
A09p61750 Brassica napus HOM05D001486 ORTHO05D004921 6.5e-99 364.4 230 80.9
C08p45360 Brassica napus HOM05D001486 ORTHO05D004921 4.2e-98 361.7 230 80.0
BolC8t52091H Brassica oleracea HOM05D001486 ORTHO05D004921 5.5e-98 361.3 231 80.5
C05p12830 Brassica napus HOM05D001486 ORTHO05D004921 8.8e-96 354.0 230 79.6
BolC5t30028H Brassica oleracea HOM05D001486 ORTHO05D004921 1.2e-95 353.6 230 79.1
Sp1g13290 Schrenkiella parvula HOM05D001486 ORTHO05D004921 2.6e-95 352.4 230 78.7
A06p10890 Brassica napus HOM05D001486 ORTHO05D004921 4.4e-95 351.7 230 79.1
BraA06t24267Z Brassica rapa HOM05D001486 ORTHO05D004921 4.4e-95 351.7 230 79.1
BraA09t41545Z Brassica rapa HOM05D001486 ORTHO05D004921 1.3e-94 350.1 231 78.4
CARHR015390 Cardamine hirsuta HOM05D001486 ORTHO05D004921 2.2e-94 349.4 230 79.1
Carub.0001s1464 Capsella rubella HOM05D001486 ORTHO05D004921 1.4e-93 346.7 230 78.7
BcaC07g41534 Brassica carinata HOM05D001486 ORTHO05D004921 1.8e-93 346.3 231 78.8
BcaB08g34420 Brassica carinata HOM05D001486 ORTHO05D004921 5.3e-93 344.7 231 78.8
BcaC05g25406 Brassica carinata HOM05D001486 ORTHO05D004921 7.0e-93 344.4 230 77.4
BcaB02g06554 Brassica carinata HOM05D001486 ORTHO05D004921 1.2e-92 343.6 230 77.4
Thhalv10006562m.g Eutrema salsugineum HOM05D001486 ORTHO05D004921 1.0e-91 340.5 230 77.4
Dinv10475 Davidia involucrata HOM05D001486 ORTHO05D004921 1.6e-81 306.6 230 68.7
Thecc.02G292500 Theobroma cacao HOM05D001486 ORTHO05D004921 2.1e-81 306.2 230 69.1
CiPaw.06G051900 Carya illinoinensis HOM05D001486 ORTHO05D004921 3.6e-81 305.4 230 68.3
GSVIVG01011662001 Vitis vinifera HOM05D001486 ORTHO05D004921 3.6e-81 305.4 230 67.8
Nn4g24372 Nelumbo nucifera HOM05D001486 ORTHO05D004921 4.7e-81 305.1 230 67.8
QL03p035815 Quercus lobata HOM05D001486 ORTHO05D004921 1.4e-80 303.5 230 67.8
Sabra08G0102800 Salix brachista HOM05D001486 ORTHO05D004921 1.4e-80 303.5 242 65.7
MD13G1020400 Malus domestica HOM05D001486 ORTHO05D004921 1.8e-80 303.1 230 67.4
Manes.17G083900 Manihot esculenta HOM05D001486 ORTHO05D004921 2.3e-80 302.8 230 67.0
COL.COLO4_16588 Corchorus olitorius HOM05D001486 ORTHO05D004921 4.0e-80 302.0 230 67.8
Potri.008G134800 Populus trichocarpa HOM05D001486 ORTHO05D004921 6.8e-80 301.2 230 67.4
Atru.chr11.925 Acer truncatum HOM05D001486 ORTHO05D004921 2.6e-79 299.3 230 67.4
Prupe.1G333300 Prunus persica HOM05D001486 ORTHO05D004921 3.4e-79 298.9 230 66.1
Lj3A864G85 Lonicera japonica HOM05D001486 ORTHO05D004921 5.7e-79 298.1 230 67.0
CSS0037038 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 9.8e-79 297.4 231 66.2
Actinidia36627 Actinidia chinensis HOM05D001486 ORTHO05D004921 4.9e-78 295.0 230 66.1
Ciclev10014036m.g Citrus clementina HOM05D001486 ORTHO05D004921 4.9e-78 295.0 228 66.2
Gohir.D02G139700 Gossypium hirsutum HOM05D001486 ORTHO05D004921 4.9e-78 295.0 230 66.5
Gohir.A03G115400 Gossypium hirsutum HOM05D001486 ORTHO05D004921 6.3e-78 294.7 230 67.0
Gorai.005G157100 Gossypium raimondii HOM05D001486 ORTHO05D004921 1.1e-77 293.9 230 66.1
TWI74G0959 Tripterygium wilfordii HOM05D001486 ORTHO05D004921 3.1e-77 292.4 230 63.9
Duzib268G0355 Durio zibethinus HOM05D001486 ORTHO05D004921 5.4e-77 291.6 230 66.1
PSO782G0822 Papaver somniferum HOM05D001486 ORTHO05D004921 7.0e-77 291.2 229 65.5
PSO063G3102 Papaver somniferum HOM05D001486 ORTHO05D004921 1.2e-76 290.4 229 65.5
Hma1.2p1_0277F.1_g111740 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 2.7e-76 289.3 246 63.4
Rhsim09G0089500 Rhododendron simsii HOM05D001486 ORTHO05D004921 3.5e-76 288.9 229 64.2
arahy.Tifrunner.gnm1.ann1.WZE3XK Arachis hypogaea HOM05D001486 ORTHO05D004921 4.5e-76 288.5 230 65.2
FvH4_4g33560 Fragaria vesca HOM05D001486 ORTHO05D004921 5.9e-76 288.1 230 63.5
FAN12G0503 Fragaria x ananassa HOM05D001486 ORTHO05D004921 5.9e-76 288.1 230 63.5
FAN22G2372 Fragaria x ananassa HOM05D001486 ORTHO05D004921 5.9e-76 288.1 230 63.5
MSTRG.2128 Avicennia marina HOM05D001486 ORTHO05D004921 7.8e-76 287.7 230 63.9
MD16G1018800 Malus domestica HOM05D001486 ORTHO05D004921 7.8e-76 287.7 225 66.2
Duzib251G0538 Durio zibethinus HOM05D001486 ORTHO05D004921 1.0e-75 287.3 230 65.7
SalBow2G2685 Salvia bowleyana HOM05D001486 ORTHO05D004921 1.3e-75 287.0 230 63.5
vmacro10693 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 2.9e-75 285.8 229 63.8
FAN17G1739 Fragaria x ananassa HOM05D001486 ORTHO05D004921 3.8e-75 285.4 230 63.0
RcHm_v2.0_Chr4g0443061 Rosa chinensis HOM05D001486 ORTHO05D004921 3.8e-75 285.4 230 63.0
Hund13366 Selenicereus undatus HOM05D001486 ORTHO05D004921 3.8e-75 285.4 229 64.6
Cpa.g.sc2.194 Carica papaya HOM05D001486 ORTHO05D004921 6.6e-75 284.6 230 63.0
Migut.E00481 Erythranthe guttata HOM05D001486 ORTHO05D004921 1.1e-74 283.9 230 63.0
Cc04_g10510 Coffea canephora HOM05D001486 ORTHO05D004921 1.9e-74 283.1 230 63.9
Solyc07g008160.3 Solanum lycopersicum HOM05D001486 ORTHO05D004921 1.9e-74 283.1 230 63.9
Oeu064208.1 Olea europaea HOM05D001486 ORTHO05D004921 2.5e-74 282.7 230 62.6
PGR142G2431 Punica granatum HOM05D001486 ORTHO05D004921 2.5e-74 282.7 229 64.2
CAN.G601.2 Capsicum annuum HOM05D001486 ORTHO05D004921 3.3e-74 282.3 231 63.2
CANSAT01G0610 Cannabis sativa HOM05D001486 ORTHO05D004921 5.6e-74 281.6 228 64.0
arahy.Tifrunner.gnm1.ann1.FK3VI9 Arachis hypogaea HOM05D001486 ORTHO05D004921 7.3e-74 281.2 224 64.7
Eucgr.G02106 Eucalyptus grandis HOM05D001486 ORTHO05D004921 7.3e-74 281.2 230 63.0
Medtr8g105290 Medicago truncatula HOM05D001486 ORTHO05D004921 7.3e-74 281.2 230 62.2
Psat7g007960 Pisum sativum HOM05D001486 ORTHO05D004921 7.3e-74 281.2 230 62.2
CAN.G149.16 Capsicum annuum HOM05D001486 ORTHO05D004921 9.5e-74 280.8 230 62.6
Glyma.08G045900 Glycine max HOM05D001486 ORTHO05D004921 1.2e-73 280.4 231 64.1
SGA_v2.0_scaffold23G10214 Striga asiatica HOM05D001486 ORTHO05D004921 1.2e-73 280.4 231 63.2
VMungo0251G0466 Vigna mungo HOM05D001486 ORTHO05D004921 1.2e-73 280.4 231 63.6
Ca_17277_v3 Cicer arietinum L. HOM05D001486 ORTHO05D004921 1.6e-73 280.0 230 62.2
Sopen07g004030 Solanum pennellii HOM05D001486 ORTHO05D004921 2.1e-73 279.6 230 63.5
THA.LOC104823681 Tarenaya hassleriana HOM05D001486 ORTHO05D004921 2.8e-73 279.3 231 64.9
ATR0753G157 Amborella trichopoda HOM05D001486 ORTHO05D004921 6.1e-73 278.1 231 61.0
Actinidia12394 Actinidia chinensis HOM05D001486 ORTHO05D004921 1.0e-72 277.3 221 64.7
Phvul.002G321200 Phaseolus vulgaris HOM05D001486 ORTHO05D004921 1.0e-72 277.3 231 62.8
TPR.G19252 Trifolium pratense HOM05D001486 ORTHO05D004921 1.4e-72 276.9 230 61.7
Sed0010499 Sechium edule HOM05D001486 ORTHO05D004921 5.2e-72 275.0 230 62.2
FAN07G1595 Fragaria x ananassa HOM05D001486 ORTHO05D004921 6.8e-72 274.6 224 62.5
Glyma.05G238800 Glycine max HOM05D001486 ORTHO05D004921 6.8e-72 274.6 230 62.2
HanXRQChr08g0212501 Helianthus annuus HOM05D001486 ORTHO05D004921 6.8e-72 274.6 230 61.3
ECA233G0786 Erigeron canadensis HOM05D001486 ORTHO05D004921 1.2e-71 273.9 230 60.9
Lalb_Chr09g0330891 Lupinus albus HOM05D001486 ORTHO05D004921 2.6e-71 272.7 230 61.3
Aqoxy3G03310 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 4.4e-71 271.9 224 64.3
Lj4g0010019 Lotus japonicus HOM05D001486 ORTHO05D004921 5.8e-71 271.6 232 62.1
Aa31LG1G260 Aethionema arabicum HOM05D001486 ORTHO05D004921 7.5e-71 271.2 185 76.2
ClCG07G005610 Citrullus lanatus HOM05D001486 ORTHO05D004921 1.3e-70 270.4 226 60.2
Aqoxy7G03241 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 1.7e-70 270.0 224 64.3
CsaV3_5G015740 Cucumis sativus L. HOM05D001486 ORTHO05D004921 1.7e-70 270.0 230 60.9
Sc11g0004180 Simmondsia chinensis HOM05D001486 ORTHO05D004921 1.7e-70 270.0 232 59.5
EL10Ac3g06288 Beta vulgaris HOM05D001486 ORTHO05D004921 3.2e-69 265.8 230 60.4
Lalb_Chr05g0222211 Lupinus albus HOM05D001486 ORTHO05D004921 4.1e-69 265.4 230 59.6
TAR629G0795 Trochodendron aralioides HOM05D001486 ORTHO05D004921 4.1e-69 265.4 229 62.4
MELO3C026441.2 Cucumis melo HOM05D001486 ORTHO05D004921 5.4e-69 265.0 226 59.7
Ah.13g072990 Amaranthus hybridus HOM05D001486 ORTHO05D004921 2.3e-67 259.6 230 60.0
HPP92_002282 Vanilla planifolia HOM05D001486 ORTHO05D004921 3.6e-65 252.3 218 59.6
unitig_27.g25159 Utricularia gibba HOM05D001486 ORTHO05D004921 6.8e-64 248.1 228 53.9
SEGI_06977 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 1.2e-63 247.3 231 55.8
Zm00001eb009110 Zea mays HOM05D001486 ORTHO05D004921 4.4e-63 245.4 228 54.8
Os06g0305200 Oryza sativa ssp. japonica HOM05D001486 ORTHO05D004921 7.5e-63 244.6 224 55.4
DCAR_007329 Daucus carota HOM05D001486 ORTHO05D004921 2.9e-62 242.7 228 56.6
Lj1g0014898 Lotus japonicus HOM05D001486 ORTHO05D004921 2.4e-61 239.6 224 56.2
Lsat_1_v5_gn_8_46521 Lactuca sativa HOM05D001486 ORTHO05D004921 8.6e-59 231.1 217 54.8
Pp3c8_3720 Physcomitrium patens HOM05D001486 ORTHO05D004921 1.8e-56 223.4 224 51.8
AUR62030013 Chenopodium quinoa HOM05D001486 ORTHO05D004921 1.5e-55 220.3 184 60.9
AUR62002589 Chenopodium quinoa HOM05D001486 ORTHO05D004921 2.0e-55 219.9 184 60.3
Zm00001eb255180 Zea mays HOM05D001486 ORTHO05D004921 1.9e-53 213.4 206 53.9
Mapoly0035s0137 Marchantia polymorpha HOM05D001486 ORTHO05D004921 7.1e-53 211.5 224 48.2
CDE06G1153 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 9.5e-50 201.1 188 55.9
HanXRQChr12g0363231 Helianthus annuus HOM05D001486 ORTHO05D004921 2.4e-45 186.4 211 48.8
vmacro04889 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 4.2e-45 185.7 121 74.4
vmacro09906 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 1.5e-42 177.2 127 66.1
Haze_10881 Corylus avellana HOM05D001486 ORTHO05D004921 4.0e-40 169.1 171 53.8
Nitab4.5_0010421g0010 Nicotiana tabacum HOM05D001486 ORTHO05D004921 3.2e-37 159.5 149 57.7
Nitab4.5_0004576g0040 Nicotiana tabacum HOM05D001486 ORTHO05D004921 3.5e-36 156.0 149 55.0
Peaxi162Scf00376g00816 Petunia axillaris HOM05D001486 ORTHO05D004921 6.0e-36 155.2 149 55.7
CSS0012816 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 1.3e-33 147.5 190 46.3
RcHm_v2.0_Chr2g0167021 Rosa chinensis HOM05D001486 ORTHO05D004921 1.5e-26 124.0 226 40.7
Peaxi162Scf01391g00116 Petunia axillaris HOM05D001486 ORTHO05D004921 4.0e-24 115.9 108 57.4
Rhsim12G0118300 Rhododendron simsii HOM05D001486 ORTHO05D004921 1.3e-22 110.9 101 59.4
Zm00001eb201400 Zea mays HOM05D001486 ORTHO05D004921 2.2e-22 110.2 131 45.8
CDE07G1854 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 1.9e-13 80.5 46 76.1


User provided reference genes

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