Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 3.4e-247 857.8 422 100.0
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 1.9e-245 852.0 422 98.8
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 1.2e-239 832.8 423 96.0
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 5.9e-239 830.5 422 95.0
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 2.1e-236 822.0 422 94.3
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 7.4e-234 813.5 423 93.4
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 7.4e-234 813.5 423 93.4
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 7.4e-234 813.5 424 93.4
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 4.8e-233 810.8 423 93.1
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 8.2e-233 810.1 423 92.9
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 8.2e-233 810.1 423 92.9
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 1.5e-218 762.7 422 88.2
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 2.2e-217 758.8 424 87.7
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 4.1e-200 701.4 423 80.1
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 2.6e-194 682.2 401 79.8
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 8.3e-193 677.2 397 80.6
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 3.5e-191 671.8 405 78.0
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 7.8e-191 670.6 394 80.2
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 1.0e-190 670.2 399 78.7
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 1.0e-190 670.2 401 78.3
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 1.3e-190 669.8 420 75.7
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 3.0e-190 668.7 399 78.2
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 5.0e-190 667.9 390 80.3
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 1.9e-189 666.0 419 75.7
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 1.9e-189 666.0 393 80.4
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 3.3e-189 665.2 430 75.1
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 3.3e-189 665.2 422 76.3
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 7.3e-189 664.1 420 76.4
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 9.5e-189 663.7 394 80.2
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 2.1e-188 662.5 399 78.4
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 3.6e-188 661.8 392 79.1
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 1.1e-187 660.2 419 76.8
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 1.1e-187 660.2 411 76.4
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 1.4e-187 659.8 411 75.9
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 1.8e-187 659.4 418 76.3
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 1.8e-187 659.4 412 77.4
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 3.1e-187 658.7 414 77.3
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 3.1e-187 658.7 385 80.0
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 3.1e-187 658.7 385 80.0
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 5.2e-187 657.9 422 75.4
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 6.8e-187 657.5 411 75.7
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 6.8e-187 657.5 407 76.7
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 4.4e-186 654.8 395 77.0
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 5.8e-186 654.4 401 77.8
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 7.5e-186 654.1 416 75.7
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 1.7e-185 652.9 401 77.8
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 2.2e-185 652.5 392 79.6
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 2.9e-185 652.1 411 74.9
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 3.7e-185 651.7 418 73.9
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 3.7e-185 651.7 392 79.3
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 4.9e-185 651.4 395 76.7
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 6.4e-185 651.0 411 74.7
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 1.1e-184 650.2 390 77.4
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 1.1e-184 650.2 396 76.5
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 1.4e-184 649.8 400 76.0
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 1.4e-184 649.8 422 74.2
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 1.9e-184 649.4 416 76.4
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 2.4e-184 649.0 422 75.4
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 3.2e-184 648.7 395 76.5
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 3.2e-184 648.7 397 76.6
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 5.4e-184 647.9 412 76.5
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 5.4e-184 647.9 409 76.8
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 3.5e-183 645.2 411 74.7
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 4.6e-183 644.8 418 73.0
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 6.0e-183 644.4 422 74.4
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 7.8e-183 644.0 421 74.8
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 1.3e-182 643.3 397 75.8
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 1.3e-182 643.3 404 75.0
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 3.0e-182 642.1 422 74.4
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 3.9e-182 641.7 422 73.5
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 6.6e-182 641.0 386 77.7
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 8.6e-182 640.6 389 77.4
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 8.6e-182 640.6 396 75.0
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 2.5e-181 639.0 398 75.4
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 2.5e-181 639.0 416 72.8
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 2.5e-181 639.0 388 77.3
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 7.3e-181 637.5 418 72.5
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 9.5e-181 637.1 420 72.4
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 2.8e-180 635.6 420 72.4
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 3.4e-178 628.6 397 74.8
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 5.8e-178 627.9 420 72.9
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 2.2e-177 625.9 419 70.9
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 1.3e-169 600.1 387 73.4
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 4.9e-169 598.2 385 73.8
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 2.1e-167 592.8 429 66.2
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 2.1e-164 582.8 357 77.3
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 2.8e-164 582.4 348 78.7
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 2.8e-164 582.4 348 78.4
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 6.2e-164 581.3 371 76.0
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 1.1e-160 570.5 412 65.0
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 1.6e-159 566.6 369 73.7
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 4.3e-157 558.5 370 72.7
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 9.6e-157 557.4 372 73.1
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 9.9e-154 547.4 324 77.5
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 2.1e-151 539.7 321 77.3
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 1.0e-150 537.3 326 76.7
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 3.0e-150 535.8 387 63.6
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 1.3e-148 530.4 336 74.1
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 4.8e-148 528.5 398 62.3
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 4.0e-147 525.4 330 74.8
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 2.2e-145 519.6 416 59.1
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 3.2e-144 515.8 327 73.7
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 1.6e-143 513.5 314 75.5
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 1.8e-142 510.0 385 60.3
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 3.0e-142 509.2 410 65.4
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 5.5e-136 488.4 314 71.0
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 3.9e-134 482.3 284 81.0
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 1.1e-123 447.6 293 74.1
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 1.3e-121 440.7 318 70.4
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 6.5e-121 438.3 267 76.4
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 1.6e-103 380.6 403 47.6
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 2.3e-102 376.7 270 61.5
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 7.7e-98 361.7 405 45.9
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 1.6e-95 354.0 252 68.3
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 4.0e-94 349.4 247 71.7
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 1.2e-82 311.2 200 74.0
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 6.6e-81 305.4 396 41.2
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 2.2e-68 263.8 434 35.5
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 6.4e-68 262.3 357 39.5
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 2.2e-60 237.3 326 42.3
BcaC09g51580 Brassica carinata HOM05D006124 ORTHO05D007854 4.2e-35 153.3 93 87.1
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 6.4e-28 129.4 81 67.9
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 1.6e-23 114.8 74 70.3
Peaxi162Scf00876g00016 Petunia axillaris HOM05D006124 ORTHO05D007854 2.6e-21 107.5 92 66.3
Lj1A682T15 Lonicera japonica HOM05D006124 ORTHO05D007854 7.9e-18 95.9 54 72.2
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 1.4e-14 85.1 88 51.1
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 2.9e-12 77.4 135 35.6
RcHm_v2.0_Chr5g0060231 Rosa chinensis HOM05D006124 ORTHO05D007854 9.4e-11 72.4 61 54.1
HPP92_015147 Vanilla planifolia HOM05D006124 ORTHO05D007854 4.6e-10 70.1 54 66.7
ECA233G1860 Erigeron canadensis HOM05D000013 ORTHO05D000011 2.8e-07 60.8 105 38.1


User provided reference genes

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