Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p14110 Brassica napus HOM05D004448 ORTHO05D005919 9.3e-273 943.0 485 100.0
BraA10t43502Z Brassica rapa HOM05D004448 ORTHO05D005919 8.7e-271 936.4 485 99.2
BcaC04g20054 Brassica carinata HOM05D004448 ORTHO05D005919 3.8e-250 867.8 488 92.4
C09p48340 Brassica napus HOM05D004448 ORTHO05D005919 7.9e-248 860.1 488 91.8
BolC9t57684H Brassica oleracea HOM05D004448 ORTHO05D005919 5.2e-247 857.4 488 92.0
BcaB08g36059 Brassica carinata HOM05D004448 ORTHO05D005919 9.7e-238 826.6 486 88.7
Sp6g18520 Schrenkiella parvula HOM05D004448 ORTHO05D005919 5.0e-218 761.1 462 82.3
AT5G56780 Arabidopsis thaliana HOM05D004448 ORTHO05D005919 9.8e-206 720.3 463 79.0
AL8G32620 Arabidopsis lyrata HOM05D004448 ORTHO05D005919 4.1e-196 688.3 537 71.5
Carub.0008s1726 Capsella rubella HOM05D004448 ORTHO05D005919 7.3e-193 677.6 491 76.6
Thhalv10015325m.g Eutrema salsugineum HOM05D004448 ORTHO05D005919 4.7e-192 674.9 435 79.3
BcaC02g12506 Brassica carinata HOM05D004448 ORTHO05D005919 4.6e-187 658.3 495 74.7
C04p01820 Brassica napus HOM05D004448 ORTHO05D005919 3.3e-185 652.1 491 75.8
BraA05t19157Z Brassica rapa HOM05D004448 ORTHO05D005919 3.8e-181 638.6 498 74.1
CARHR270530 Cardamine hirsuta HOM05D004448 ORTHO05D005919 1.6e-179 633.3 461 75.1
Aa31LG3G12720 Aethionema arabicum HOM05D004448 ORTHO05D005919 9.6e-177 624.0 455 70.5
BcaC02g12705 Brassica carinata HOM05D004448 ORTHO05D005919 1.5e-174 616.7 497 72.8
THA.LOC104813490 Tarenaya hassleriana HOM05D004448 ORTHO05D005919 1.5e-161 573.5 493 63.7
Aa31LG2G21230 Aethionema arabicum HOM05D004448 ORTHO05D005919 1.1e-153 547.4 483 64.4
A05p01610 Brassica napus HOM05D004448 ORTHO05D005919 6.5e-133 478.4 334 76.0
CARHR270520 Cardamine hirsuta HOM05D004448 ORTHO05D005919 3.9e-85 319.7 428 47.7
Manes.03G032000 Manihot esculenta HOM05D004448 ORTHO05D005919 1.8e-82 310.8 444 44.1
ClCG03G015750 Citrullus lanatus HOM05D004448 ORTHO05D005919 5.2e-82 309.3 445 42.9
Potri.006G150000 Populus trichocarpa HOM05D004448 ORTHO05D005919 2.6e-81 307.0 452 42.5
Cfa003108 Carpinus fangiana HOM05D004448 ORTHO05D005919 7.5e-81 305.4 510 38.4
Actinidia25266 Actinidia chinensis HOM05D004448 ORTHO05D005919 9.9e-81 305.1 434 42.9
Gohir.D08G265800 Gossypium hirsutum HOM05D004448 ORTHO05D005919 1.3e-80 304.7 471 40.8
Gohir.A08G245000 Gossypium hirsutum HOM05D004448 ORTHO05D005919 2.9e-80 303.5 475 41.5
AUR62027409 Chenopodium quinoa HOM05D004448 ORTHO05D005919 1.4e-79 301.2 427 41.9
Cpa.g.sc7.238 Carica papaya HOM05D004448 ORTHO05D005919 4.1e-79 299.7 306 52.3
GSVIVG01015227001 Vitis vinifera HOM05D004448 ORTHO05D005919 1.2e-78 298.1 446 41.7
Haze_25890 Corylus avellana HOM05D004448 ORTHO05D005919 1.6e-78 297.7 453 39.5
QL02p063021 Quercus lobata HOM05D004448 ORTHO05D005919 1.6e-78 297.7 482 39.0
AUR62031324 Chenopodium quinoa HOM05D004448 ORTHO05D005919 2.1e-78 297.4 427 41.0
Ciclev10010615m.g Citrus clementina HOM05D004448 ORTHO05D005919 6.0e-78 295.8 483 38.9
COL.COLO4_18221 Corchorus olitorius HOM05D004448 ORTHO05D005919 6.0e-78 295.8 480 39.6
TWI32G1061 Tripterygium wilfordii HOM05D004448 ORTHO05D005919 6.0e-78 295.8 457 40.3
Sabra06G0118700 Salix brachista HOM05D004448 ORTHO05D005919 7.8e-78 295.4 457 40.7
Gohir.D08G266000 Gossypium hirsutum HOM05D004448 ORTHO05D005919 1.0e-77 295.0 359 47.6
RcHm_v2.0_Chr2g0093041 Rosa chinensis HOM05D004448 ORTHO05D005919 1.0e-77 295.0 444 39.9
Dinv36750 Davidia involucrata HOM05D004448 ORTHO05D005919 1.3e-77 294.7 478 39.7
Oeu024590.1 Olea europaea HOM05D004448 ORTHO05D005919 1.1e-76 291.6 374 46.3
Phvul.004G171600 Phaseolus vulgaris HOM05D004448 ORTHO05D005919 1.5e-76 291.2 449 39.0
Ah.14g085380 Amaranthus hybridus HOM05D004448 ORTHO05D005919 4.3e-76 289.7 450 41.3
Cc06_g11170 Coffea canephora HOM05D004448 ORTHO05D005919 4.3e-76 289.7 444 41.4
FvH4_1g07151 Fragaria vesca HOM05D004448 ORTHO05D005919 7.3e-76 288.9 446 40.1
FAN26G0987 Fragaria x ananassa HOM05D004448 ORTHO05D005919 1.6e-75 287.7 447 38.9
FAN26G2794 Fragaria x ananassa HOM05D004448 ORTHO05D005919 1.6e-75 287.7 448 39.3
EL10Ac8g19309 Beta vulgaris HOM05D004448 ORTHO05D005919 3.6e-75 286.6 420 42.4
Dinv42301 Davidia involucrata HOM05D004448 ORTHO05D005919 4.7e-75 286.2 397 43.1
CSS0023607 Camellia sinensis var. sinensis HOM05D004448 ORTHO05D005919 6.2e-75 285.8 446 41.9
Lj2g0008301 Lotus japonicus HOM05D004448 ORTHO05D005919 1.4e-74 284.6 485 37.5
Duzib168G0645 Durio zibethinus HOM05D004448 ORTHO05D005919 1.8e-74 284.3 393 43.8
PGR142G4073 Punica granatum HOM05D004448 ORTHO05D005919 1.8e-74 284.3 463 38.4
CsaV3_1G040260 Cucumis sativus L. HOM05D004448 ORTHO05D005919 6.8e-74 282.3 432 38.9
Psat1g049640 Pisum sativum HOM05D004448 ORTHO05D005919 6.8e-74 282.3 385 42.6
Sc18g0001910 Simmondsia chinensis HOM05D004448 ORTHO05D005919 1.2e-73 281.6 389 41.9
AL7G26800 Arabidopsis lyrata HOM05D004448 ORTHO05D015948 1.5e-73 281.2 484 39.0
Lsat_1_v5_gn_5_145680 Lactuca sativa HOM05D004448 ORTHO05D005919 1.5e-73 281.2 428 41.8
PSO210G3334 Papaver somniferum HOM05D004448 ORTHO05D005919 1.5e-73 281.2 477 39.8
Peaxi162Scf00175g00047 Petunia axillaris HOM05D004448 ORTHO05D005919 2.6e-73 280.4 452 39.6
arahy.Tifrunner.gnm1.ann1.6Q96ZG Arachis hypogaea HOM05D004448 ORTHO05D005919 4.4e-73 279.6 382 41.9
VMungo0464G0625 Vigna mungo HOM05D005189 ORTHO05D006093 4.4e-73 279.6 369 43.6
arahy.Tifrunner.gnm1.ann1.LLR3FQ Arachis hypogaea HOM05D004448 ORTHO05D005919 5.8e-73 279.3 382 41.4
Thecc.09G092200 Theobroma cacao HOM05D004448 ORTHO05D005919 7.6e-73 278.9 486 37.4
Prupe.7G212600 Prunus persica HOM05D004448 ORTHO05D005919 9.9e-73 278.5 460 39.6
CsaV3_UNG066510 Cucumis sativus L. HOM05D004448 ORTHO05D005919 2.2e-72 277.3 428 38.8
Medtr6g092520 Medicago truncatula HOM05D004448 ORTHO05D005919 2.2e-72 277.3 377 41.1
MELO3C015453.2 Cucumis melo HOM05D004448 ORTHO05D005919 3.8e-72 276.6 433 37.6
Glyma.07G128700 Glycine max HOM05D004448 ORTHO05D005919 6.4e-72 275.8 449 37.4
Thhalv10025245m.g Eutrema salsugineum HOM05D004448 ORTHO05D015948 1.1e-71 275.0 404 42.3
Nitab4.5_0000713g0030 Nicotiana tabacum HOM05D004448 ORTHO05D005919 1.1e-71 275.0 481 37.2
Eucgr.C00913 Eucalyptus grandis HOM05D004448 ORTHO05D005919 1.9e-71 274.2 489 36.8
Sp7g24190 Schrenkiella parvula HOM05D004448 ORTHO05D015948 5.4e-71 272.7 510 42.0
MBI08_g34934_MAGBIO Magnolia biondii HOM05D004448 ORTHO05D005919 4.6e-70 269.6 360 45.0
Hund06702 Selenicereus undatus HOM05D004448 ORTHO05D005919 4.6e-70 269.6 381 43.0
PGSC0003DMG400033614 Solanum tuberosum HOM05D004448 ORTHO05D005919 6.0e-70 269.2 447 39.6
CANSAT56G0950 Cannabis sativa HOM05D004448 ORTHO05D005919 1.0e-69 268.5 404 41.6
Nitab4.5_0000938g0020 Nicotiana tabacum HOM05D004448 ORTHO05D005919 1.0e-69 268.5 444 39.6
Aa31LG3G540 Aethionema arabicum HOM05D001256 ORTHO05D001141 1.3e-69 268.1 529 38.8
PSO210G5509 Papaver somniferum HOM05D004448 ORTHO05D005919 1.7e-69 267.7 475 37.7
FAN23G3053 Fragaria x ananassa HOM05D004448 ORTHO05D005919 3.9e-69 266.5 423 37.1
Nn8g38906 Nelumbo nucifera HOM05D004448 ORTHO05D005919 3.9e-69 266.5 511 36.0
Rhsim05G0022900 Rhododendron simsii HOM05D004448 ORTHO05D005919 6.6e-69 265.8 485 39.0
CARHR233700 Cardamine hirsuta HOM05D004448 ORTHO05D015948 1.9e-68 264.2 458 38.2
Atru.chr7.1561 Acer truncatum HOM05D004448 ORTHO05D005919 3.3e-68 263.5 418 41.4
DCAR_024685 Daucus carota HOM05D004448 ORTHO05D005919 4.3e-68 263.1 451 38.8
Sopen07g011050 Solanum pennellii HOM05D004448 ORTHO05D005919 9.6e-68 261.9 444 38.5
RhsimUnG0189000 Rhododendron simsii HOM05D004448 ORTHO05D005919 1.6e-67 261.2 432 39.6
Nitab4.5_0004087g0010 Nicotiana tabacum HOM05D004448 ORTHO05D005919 2.8e-67 260.4 373 41.8
FAN19G1271 Fragaria x ananassa HOM05D004448 ORTHO05D005919 6.2e-67 259.2 415 37.8
vmacro22686 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 6.2e-67 259.2 441 38.8
Medtr7g090060 Medicago truncatula HOM05D004448 ORTHO05D005919 8.1e-67 258.8 386 38.3
vmacro17218 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 1.8e-66 257.7 442 38.5
CiPaw.03G218000 Carya illinoinensis HOM05D004448 ORTHO05D005919 2.4e-66 257.3 375 42.7
Solyc07g021550.3 Solanum lycopersicum HOM05D004448 ORTHO05D005919 4.0e-66 256.5 444 38.3
RcHm_v2.0_Chr2g0093031 Rosa chinensis HOM05D004448 ORTHO05D005919 6.9e-66 255.8 432 37.5
Hma1.2p1_0663F.1_g198910 Hydrangea macrophylla HOM05D004448 ORTHO05D005919 9.0e-66 255.4 439 37.8
SalBow6G4094 Salvia bowleyana HOM05D004448 ORTHO05D005919 9.9e-65 251.9 388 39.7
HanXRQChr12g0354731 Helianthus annuus HOM05D004448 ORTHO05D005919 8.4e-64 248.8 421 38.5
Gohir.A08G244900 Gossypium hirsutum HOM05D004448 ORTHO05D005919 2.4e-63 247.3 435 37.9
ECA234G2909 Erigeron canadensis HOM05D004448 ORTHO05D005919 2.3e-61 240.7 304 45.1
Aqoxy5G03492 Aquilegia oxysepala HOM05D004448 ORTHO05D005919 8.7e-61 238.8 415 37.3
Ciclev10008074m.g Citrus clementina HOM05D004448 ORTHO05D005919 1.9e-60 237.7 494 33.4
Migut.J00591 Erythranthe guttata HOM05D004448 ORTHO05D005919 1.3e-59 235.0 309 44.7
unitig_0.g218 Utricularia gibba HOM05D004448 ORTHO05D005919 3.6e-59 233.4 394 39.6
Carub.0007s1478 Capsella rubella HOM05D004448 ORTHO05D015948 1.1e-58 231.9 482 35.5
CDE09G0006 Ceratophyllum demersum HOM05D004448 ORTHO05D005919 5.3e-58 229.6 445 36.0
AT4G26170 Arabidopsis thaliana HOM05D004448 ORTHO05D015948 2.6e-57 227.3 418 38.0
Rhsim03G0233500 Rhododendron simsii HOM05D004448 ORTHO05D005919 2.7e-54 217.2 429 34.5
CSS0050052 Camellia sinensis var. sinensis HOM05D004448 ORTHO05D005919 6.0e-54 216.1 512 31.6
HPP92_006937 Vanilla planifolia HOM05D004448 ORTHO05D005919 7.9e-54 215.7 307 43.3
AT5G56770 Arabidopsis thaliana HOM05D004448 ORTHO05D005919 6.7e-53 212.6 223 53.8
Os07g0586700 Oryza sativa ssp. japonica HOM05D004448 ORTHO05D005919 6.7e-53 212.6 472 33.1
Ca_08398_v3 Cicer arietinum L. HOM05D004448 ORTHO05D005919 1.5e-52 211.5 296 41.9
Zm00001eb325970 Zea mays HOM05D004448 ORTHO05D005919 8.1e-51 205.7 346 39.3
Duzib150G0429 Durio zibethinus HOM05D004448 ORTHO05D005919 5.3e-50 203.0 506 31.0
Mapoly0070s0093 Marchantia polymorpha HOM05D004448 ORTHO05D005919 2.5e-47 194.1 461 31.5
AagrBONN_evm.TU.Sc2ySwM_117.4075 Anthoceros agrestis HOM05D004448 ORTHO05D005919 9.3e-47 192.2 348 35.9
ATR0705G152 Amborella trichopoda HOM05D004448 ORTHO05D005919 1.1e-44 185.3 305 39.7
Pp3c3_34250 Physcomitrium patens HOM05D004448 ORTHO05D005919 7.4e-44 182.6 334 37.1
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 2.1e-43 181.0 494 30.6
BcaNung02444 Brassica carinata HOM05D004448 ORTHO05D015948 1.4e-42 178.3 512 34.0
SMO139G0129 Selaginella moellendorffii HOM05D006068 ORTHO05D007579 9.0e-42 175.6 347 34.6
AL8G32610 Arabidopsis lyrata HOM05D004448 ORTHO05D005919 1.2e-41 175.3 175 52.0
vmacro06280 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 1.2e-41 175.3 294 37.8
Gohir.A08G245100 Gossypium hirsutum HOM05D004448 ORTHO05D005919 1.0e-40 172.2 358 35.2
BcaC09g50676 Brassica carinata HOM05D004448 ORTHO05D015948 1.7e-40 171.4 483 30.2
Pp3c4_9790 Physcomitrium patens HOM05D004448 ORTHO05D005919 2.9e-40 170.6 329 35.0
BraA05t19155Z Brassica rapa HOM05D004448 ORTHO05D005919 4.9e-40 169.9 138 67.4
CBR_g29538 Chara braunii HOM05D004448 ORTHO05D005919 8.4e-40 169.1 266 36.5
TPR.G40396 Trifolium pratense HOM05D004448 ORTHO05D005919 2.5e-39 167.5 233 42.9
Rhsim03G0233900 Rhododendron simsii HOM05D004448 ORTHO05D005919 3.9e-37 160.2 302 34.1
Sed0012121 Sechium edule HOM05D004448 ORTHO05D005919 6.7e-37 159.5 302 34.4
A01p17460 Brassica napus HOM05D004448 ORTHO05D015948 9.7e-36 155.6 463 31.5
Gorai.N024000 Gossypium raimondii HOM05D004448 ORTHO05D005919 2.8e-35 154.1 389 31.9
FvH4_1g07150 Fragaria vesca HOM05D004448 ORTHO05D005919 1.7e-32 144.8 282 34.8
TPR.G35500 Trifolium pratense HOM05D004448 ORTHO05D005919 6.5e-32 142.9 155 45.2
BraA01t01701Z Brassica rapa HOM05D004448 ORTHO05D015948 2.5e-31 141.0 504 28.0
MD02G1076000 Malus domestica HOM05D004448 ORTHO05D005919 3.2e-31 140.6 146 49.3
SMO157G0009 Selaginella moellendorffii HOM05D006068 ORTHO05D007579 3.2e-31 140.6 308 32.8
SGA_v2.0_scaffold62G21589 Striga asiatica HOM05D004448 ORTHO05D005919 7.2e-31 139.4 147 49.0
Pp3c15_21310 Physcomitrium patens HOM05D004448 ORTHO05D005919 1.2e-30 138.7 392 29.8
Carub.0008s1725 Capsella rubella HOM05D004448 ORTHO05D005919 1.4e-29 135.2 190 42.1
Pp3c16_1200 Physcomitrium patens HOM05D004448 ORTHO05D005919 1.8e-29 134.8 390 29.7
CANSAT56G3488 Cannabis sativa HOM05D004448 ORTHO05D005919 2.5e-28 131.0 232 38.8
RhsimUnG0145000 Rhododendron simsii HOM05D004448 ORTHO05D005919 4.1e-26 123.6 236 36.4
Lalb_Chr24g0393831 Lupinus albus HOM05D004448 ORTHO05D005919 3.4e-25 120.6 153 40.5
TPR.G35590 Trifolium pratense HOM05D004448 ORTHO05D005919 1.0e-24 119.0 100 55.0
Atru.chr7.1554 Acer truncatum HOM05D004448 ORTHO05D005919 3.6e-22 110.5 277 31.8
Atru.chr7.1555 Acer truncatum HOM05D004448 ORTHO05D005919 1.0e-21 109.0 99 54.5
SalBow1G6253 Salvia bowleyana HOM05D004448 ORTHO05D005919 1.8e-21 108.2 140 40.7
MD02G1075500 Malus domestica HOM05D004448 ORTHO05D005919 3.9e-21 107.1 218 33.9
Gohir.D08G265900 Gossypium hirsutum HOM05D004448 ORTHO05D005919 1.4e-18 98.6 389 26.7
Pp3c27_3080 Physcomitrium patens HOM05D004448 ORTHO05D005919 1.0e-16 92.4 113 44.2
Rhsim05G0023200 Rhododendron simsii HOM05D004448 ORTHO05D005919 2.5e-15 87.8 138 33.3
RhsimUnG0144800 Rhododendron simsii HOM05D004448 ORTHO05D005919 2.5e-15 87.8 138 33.3
RhsimUnG0032400 Rhododendron simsii HOM05D004448 ORTHO05D005919 4.2e-15 87.0 152 30.9
Medtr6g092500 Medicago truncatula HOM05D004448 ORTHO05D005919 9.4e-15 85.9 113 39.8
CBR_g20264 Chara braunii HOM05D000505 ORTHO05D000301 4.1e-10 70.5 156 31.4
Pp3c5_7060 Physcomitrium patens HOM05D004448 ORTHO05D005919 5.3e-10 70.1 199 27.1
Hma1.2p1_0024F.1_g016070 Hydrangea macrophylla HOM05D004448 ORTHO05D005919 9.1e-10 69.3 99 41.4
Pp3c9_23170 Physcomitrium patens HOM05D004448 ORTHO05D005919 7.7e-09 66.2 204 30.4
Glyma.01G003300 Glycine max HOM05D004448 ORTHO05D005919 6.5e-08 63.2 72 48.6
Medtr6g092480 Medicago truncatula HOM05D012533 ORTHO05D264910 4.2e-07 60.5 54 50.0


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