Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p07400 Brassica napus HOM05D003635 ORTHO05D004283 3.5e-45 184.5 88 100.0
BraA01t04192Z Brassica rapa HOM05D003635 ORTHO05D004283 7.9e-37 156.8 96 82.3
BcaC09g48162 Brassica carinata HOM05D003635 ORTHO05D004283 1.1e-35 152.9 96 81.2
BolC1t05325H Brassica oleracea HOM05D003635 ORTHO05D004283 1.1e-35 152.9 96 81.2
BcaB02g07694 Brassica carinata HOM05D003635 ORTHO05D004283 5.6e-35 150.6 96 80.2
AT3G55200 Arabidopsis thaliana HOM05D003635 ORTHO05D004283 8.1e-34 146.7 96 76.0
AT3G55220 Arabidopsis thaliana HOM05D003635 ORTHO05D004283 8.1e-34 146.7 96 76.0
Aa31LG10G9870 Aethionema arabicum HOM05D003635 ORTHO05D004283 3.1e-33 144.8 96 76.0
Sp5g07240 Schrenkiella parvula HOM05D003635 ORTHO05D004283 5.3e-33 144.1 96 76.0
AL5G36324 Arabidopsis lyrata HOM05D003635 ORTHO05D004283 6.9e-33 143.7 96 75.0
AL5G36340 Arabidopsis lyrata HOM05D003635 ORTHO05D004283 9.0e-33 143.3 96 74.0
THA.LOC104824257 Tarenaya hassleriana HOM05D003635 ORTHO05D004283 1.5e-32 142.5 96 72.9
Manes.10G036500 Manihot esculenta HOM05D003635 ORTHO05D004283 2.6e-32 141.7 95 72.6
Thhalv10006588m.g Eutrema salsugineum HOM05D003635 ORTHO05D004283 4.5e-32 141.0 96 75.0
Gohir.D10G219000 Gossypium hirsutum HOM05D003635 ORTHO05D004283 4.5e-32 141.0 95 72.6
Gohir.A10G210700 Gossypium hirsutum HOM05D003635 ORTHO05D004283 7.6e-32 140.2 95 72.6
Gorai.011G245700 Gossypium raimondii HOM05D003635 ORTHO05D004283 7.6e-32 140.2 95 72.6
Gohir.A05G351700 Gossypium hirsutum HOM05D003635 ORTHO05D004283 1.7e-31 139.0 95 70.5
Gorai.012G068000 Gossypium raimondii HOM05D003635 ORTHO05D004283 1.7e-31 139.0 95 70.5
Duzib114G0516 Durio zibethinus HOM05D003635 ORTHO05D004283 2.2e-31 138.7 95 72.6
Thecc.10G059000 Theobroma cacao HOM05D003635 ORTHO05D004283 3.8e-31 137.9 95 70.5
THA.LOC104810010 Tarenaya hassleriana HOM05D003635 ORTHO05D004283 4.9e-31 137.5 96 67.7
Carub.0005s2188 Capsella rubella HOM05D003635 ORTHO05D004283 6.4e-31 137.1 96 74.0
Duzib128G1000 Durio zibethinus HOM05D003635 ORTHO05D004283 8.4e-31 136.7 95 70.5
Nn2g10520 Nelumbo nucifera HOM05D003635 ORTHO05D004283 1.1e-30 136.3 95 68.4
ClCG02G013500 Citrullus lanatus HOM05D003635 ORTHO05D004283 1.9e-30 135.6 96 67.7
MELO3C023823.2 Cucumis melo HOM05D003635 ORTHO05D004283 1.9e-30 135.6 96 67.7
Gohir.D04G061100 Gossypium hirsutum HOM05D003635 ORTHO05D004283 1.9e-30 135.6 95 69.5
Phvul.007G009600 Phaseolus vulgaris HOM05D003635 ORTHO05D004283 2.5e-30 135.2 96 69.8
Lj8A91T61 Lonicera japonica HOM05D003635 ORTHO05D004283 4.2e-30 134.4 95 71.6
ATR0820G062 Amborella trichopoda HOM05D003635 ORTHO05D004283 5.5e-30 134.0 96 69.8
CsaV3_5G006650 Cucumis sativus L. HOM05D003635 ORTHO05D004283 5.5e-30 134.0 96 66.7
Potri.010G212100 Populus trichocarpa HOM05D003635 ORTHO05D004283 7.1e-30 133.7 95 69.5
Ca_11305_v3 Cicer arietinum L. HOM05D003635 ORTHO05D004283 9.3e-30 133.3 96 67.7
DCAR_019162 Daucus carota HOM05D003635 ORTHO05D004283 1.2e-29 132.9 95 69.5
Glyma.10G291300 Glycine max HOM05D003635 ORTHO05D004283 1.6e-29 132.5 96 67.7
Manes.07G109100 Manihot esculenta HOM05D003635 ORTHO05D004283 1.6e-29 132.5 95 68.4
VMungo0720G0614 Vigna mungo HOM05D003635 ORTHO05D004283 1.6e-29 132.5 96 67.7
Cpa.g.sc1.324 Carica papaya HOM05D003635 ORTHO05D004283 2.7e-29 131.7 96 69.8
Atru.chr12.571 Acer truncatum HOM05D003635 ORTHO05D004283 3.5e-29 131.3 95 69.5
arahy.Tifrunner.gnm1.ann1.4JT818 Arachis hypogaea HOM05D003635 ORTHO05D004283 3.5e-29 131.3 96 66.7
arahy.Tifrunner.gnm1.ann1.T81D7J Arachis hypogaea HOM05D003635 ORTHO05D004283 3.5e-29 131.3 96 66.7
Rhsim09G0157900 Rhododendron simsii HOM05D003635 ORTHO05D004283 4.6e-29 131.0 95 68.4
Nn2g12856 Nelumbo nucifera HOM05D003635 ORTHO05D004283 6.0e-29 130.6 96 66.7
Sc06g0001910 Simmondsia chinensis HOM05D003635 ORTHO05D004283 7.9e-29 130.2 96 67.7
Hma1.2p1_3477F.1_g336300 Hydrangea macrophylla HOM05D003635 ORTHO05D004283 1.0e-28 129.8 96 65.6
Medtr1g115525 Medicago truncatula HOM05D003635 ORTHO05D004283 1.0e-28 129.8 96 64.6
Psat6g237600 Pisum sativum HOM05D003635 ORTHO05D004283 1.0e-28 129.8 96 65.6
Dinv25952 Davidia involucrata HOM05D003635 ORTHO05D004283 1.3e-28 129.4 95 67.4
Lj5g0001158 Lotus japonicus HOM05D003635 ORTHO05D004283 1.3e-28 129.4 96 64.6
QL08p057820 Quercus lobata HOM05D003635 ORTHO05D004283 1.3e-28 129.4 96 66.7
TAR369G0684 Trochodendron aralioides HOM05D003635 ORTHO05D004283 1.3e-28 129.4 96 63.5
HanXRQChr08g0228691 Helianthus annuus HOM05D003635 ORTHO05D004283 1.8e-28 129.0 95 67.4
HanXRQChr14g0437201 Helianthus annuus HOM05D003635 ORTHO05D004283 1.8e-28 129.0 95 67.4
CANSAT56G1536 Cannabis sativa HOM05D003635 ORTHO05D004283 2.3e-28 128.6 96 66.7
Dinv31402 Davidia involucrata HOM05D003635 ORTHO05D004283 2.3e-28 128.6 96 66.7
Potri.008G048900 Populus trichocarpa HOM05D003635 ORTHO05D004283 2.3e-28 128.6 95 65.3
Prupe.2G226500 Prunus persica HOM05D003635 ORTHO05D004283 2.3e-28 128.6 96 68.8
CSS0019699 Camellia sinensis var. sinensis HOM05D003635 ORTHO05D004283 3.9e-28 127.9 95 66.3
COL.COLO4_10911 Corchorus olitorius HOM05D003635 ORTHO05D004283 3.9e-28 127.9 95 67.4
Ciclev10030532m.g Citrus clementina HOM05D003635 ORTHO05D004283 5.1e-28 127.5 95 68.4
PSO384G4083 Papaver somniferum HOM05D003635 ORTHO05D004283 5.1e-28 127.5 98 66.3
Sed0026990 Sechium edule HOM05D003635 ORTHO05D004283 6.7e-28 127.1 96 66.7
TPR.G13999 Trifolium pratense HOM05D003635 ORTHO05D004283 6.7e-28 127.1 96 64.6
ECA233G0861 Erigeron canadensis HOM05D003635 ORTHO05D004283 8.7e-28 126.7 95 65.3
Cc00_g29200 Coffea canephora HOM05D003635 ORTHO05D004283 1.1e-27 126.3 95 64.2
Oeu016870.1 Olea europaea HOM05D003635 ORTHO05D004283 1.1e-27 126.3 95 68.4
DCAR_015231 Daucus carota HOM05D003635 ORTHO05D004283 1.5e-27 125.9 95 66.3
CiPaw.02G179700 Carya illinoinensis HOM05D003635 ORTHO05D004283 1.9e-27 125.6 96 65.6
CARHR289060 Cardamine hirsuta HOM05D003635 ORTHO05D004283 2.5e-27 125.2 96 71.9
CiPaw.01G281100 Carya illinoinensis HOM05D003635 ORTHO05D004283 3.3e-27 124.8 96 64.6
PSO339G2718 Papaver somniferum HOM05D003635 ORTHO05D004283 4.3e-27 124.4 98 65.3
MD07G1189000 Malus domestica HOM05D003635 ORTHO05D004283 5.6e-27 124.0 96 64.6
TWI63G0503 Tripterygium wilfordii HOM05D003635 ORTHO05D004283 5.6e-27 124.0 96 64.6
Haze_16985 Corylus avellana HOM05D003635 ORTHO05D004283 7.4e-27 123.6 96 66.7
Lsat_1_v5_gn_8_18261 Lactuca sativa HOM05D003635 ORTHO05D004283 7.4e-27 123.6 95 64.2
PGR142G3382 Punica granatum HOM05D003635 ORTHO05D004283 9.6e-27 123.2 94 66.0
MD01G1119800 Malus domestica HOM05D003635 ORTHO05D004283 1.6e-26 122.5 96 62.5
Medtr4g115500 Medicago truncatula HOM05D003635 ORTHO05D004283 2.1e-26 122.1 96 62.5
Lalb_Chr02g0143971 Lupinus albus HOM05D003635 ORTHO05D004283 3.7e-26 121.3 96 63.5
Migut.N02978 Erythranthe guttata HOM05D003635 ORTHO05D004283 6.2e-26 120.6 95 66.3
Cfa001548 Carpinus fangiana HOM05D003635 ORTHO05D004283 8.2e-26 120.2 96 64.6
Aqoxy1G01641 Aquilegia oxysepala HOM05D003635 ORTHO05D004283 1.1e-25 119.8 96 60.4
Aqoxy2G04103 Aquilegia oxysepala HOM05D003635 ORTHO05D004283 1.1e-25 119.8 96 60.4
Eucgr.J01165 Eucalyptus grandis HOM05D003635 ORTHO05D004283 1.1e-25 119.8 94 62.8
Lalb_Chr06g0164191 Lupinus albus HOM05D003635 ORTHO05D004283 1.1e-25 119.8 96 63.5
PGSC0003DMG400030187 Solanum tuberosum HOM05D003635 ORTHO05D004283 1.8e-25 119.0 95 65.3
HPP92_016710 Vanilla planifolia HOM05D003635 ORTHO05D004283 1.8e-25 119.0 98 62.2
HPP92_027161 Vanilla planifolia HOM05D003635 ORTHO05D004283 1.8e-25 119.0 98 62.2
Sopen04g005450 Solanum pennellii HOM05D003635 ORTHO05D004283 3.1e-25 118.2 95 64.2
SalBow7G2745 Salvia bowleyana HOM05D003635 ORTHO05D004283 4.0e-25 117.9 95 64.2
Medtr4g115810 Medicago truncatula HOM05D003635 ORTHO05D004283 9.0e-25 116.7 96 60.4
SEGI_11055 Sequoiadendron giganteum HOM05D003635 ORTHO05D004283 9.0e-25 116.7 96 60.4
RcHm_v2.0_Chr3g0492631 Rosa chinensis HOM05D003635 ORTHO05D004283 1.2e-24 116.3 96 61.5
Solyc04g010260.3 Solanum lycopersicum HOM05D003635 ORTHO05D004283 1.5e-24 115.9 95 63.2
FAN26G2866 Fragaria x ananassa HOM05D003635 ORTHO05D004283 2.0e-24 115.5 96 62.5
MSTRG.22089 Avicennia marina HOM05D003635 ORTHO05D004283 3.4e-24 114.8 95 62.1
Glyma.20G240500 Glycine max HOM05D003635 ORTHO05D004283 4.5e-24 114.4 96 59.4
Nitab4.5_0012497g0010 Nicotiana tabacum HOM05D003635 ORTHO05D004283 5.8e-24 114.0 95 62.1
FAN28G1205 Fragaria x ananassa HOM05D003635 ORTHO05D004283 7.6e-24 113.6 96 60.4
SGA_v2.0_scaffold54G19634 Striga asiatica HOM05D003635 ORTHO05D004283 1.0e-23 113.2 95 63.2
FvH4_1g28630 Fragaria vesca HOM05D003635 ORTHO05D004283 1.7e-23 112.5 96 60.4
FAN19G1456 Fragaria x ananassa HOM05D003635 ORTHO05D004283 1.7e-23 112.5 96 60.4
Nitab4.5_0000426g0110 Nicotiana tabacum HOM05D003635 ORTHO05D004283 1.7e-23 112.5 95 60.0
SGA_v2.0_scaffold364G49990 Striga asiatica HOM05D003635 ORTHO05D004283 2.2e-23 112.1 95 62.1
FAN23G1337 Fragaria x ananassa HOM05D003635 ORTHO05D004283 2.9e-23 111.7 96 61.5
FAN23G3063 Fragaria x ananassa HOM05D003635 ORTHO05D004283 2.9e-23 111.7 96 61.5
CAN.G1557.8 Capsicum annuum HOM05D003635 ORTHO05D004283 4.9e-23 110.9 95 60.0
unitig_736.g22269 Utricularia gibba HOM05D003635 ORTHO05D004283 1.9e-22 109.0 95 60.0
CDE02G2560 Ceratophyllum demersum HOM05D003635 ORTHO05D004283 3.2e-22 108.2 95 60.0
Os02g0137400 Oryza sativa ssp. japonica HOM05D003635 ORTHO05D004283 9.3e-22 106.7 99 57.6
Rhsim09G0158100 Rhododendron simsii HOM05D003635 ORTHO05D004283 9.3e-22 106.7 95 58.9
EL10Ac2g03470 Beta vulgaris HOM05D003635 ORTHO05D004283 7.9e-21 103.6 95 58.9
AUR62022537 Chenopodium quinoa HOM05D003635 ORTHO05D004283 7.9e-21 103.6 95 60.0
Peaxi162Scf00060g00511 Petunia axillaris HOM05D003635 ORTHO05D004283 1.3e-20 102.8 95 55.8
Pp3c4_5190 Physcomitrium patens HOM05D003635 ORTHO05D004283 2.3e-20 102.1 96 56.2
Ah.09g234270 Amaranthus hybridus HOM05D003635 ORTHO05D004283 3.0e-20 101.7 95 58.9
AUR62023868 Chenopodium quinoa HOM05D003635 ORTHO05D004283 6.7e-20 100.5 96 56.2
Mapoly0009s0019 Marchantia polymorpha HOM05D003635 ORTHO05D004283 8.7e-20 100.1 96 54.2
Hund19994 Selenicereus undatus HOM05D003635 ORTHO05D004283 1.5e-19 99.4 96 56.2
Zm00001eb231820 Zea mays HOM05D003635 ORTHO05D004283 1.9e-19 99.0 98 52.0
Medtr6g013290 Medicago truncatula HOM05D003635 ORTHO05D004283 9.0e-17 90.1 88 50.0
Pp3c16_16800 Physcomitrium patens HOM05D003635 ORTHO05D004283 2.2e-15 85.5 96 50.0
AagrBONN_evm.TU.Sc2ySwM_368.1182 Anthoceros agrestis HOM05D003635 ORTHO05D004283 2.9e-15 85.1 97 47.4
Pp3c12_11240 Physcomitrium patens HOM05D003635 ORTHO05D004283 5.0e-15 84.3 96 49.0
Actinidia13851 Actinidia chinensis HOM05D003635 ORTHO05D004283 6.5e-15 84.0 80 60.0
FAN03G1481 Fragaria x ananassa HOM05D003635 ORTHO05D004283 1.4e-14 82.8 125 44.0
AagrBONN_evm.TU.Sc2ySwM_362.982 Anthoceros agrestis HOM05D003635 ORTHO05D004283 2.5e-14 82.0 97 45.4
Actinidia02986 Actinidia chinensis HOM05D003635 ORTHO05D004283 2.1e-13 79.0 70 60.0
FvH4_7g20980 Fragaria vesca HOM05D003635 ORTHO05D004283 2.1e-13 79.0 126 42.1
SMO116G0157 Selaginella moellendorffii HOM05D003635 ORTHO05D004283 3.6e-13 78.2 91 41.8
FAN06G2419 Fragaria x ananassa HOM05D003635 ORTHO05D004283 6.1e-13 77.4 126 41.3
FAN10G2700 Fragaria x ananassa HOM05D003635 ORTHO05D004283 1.0e-12 76.6 106 45.3
FAN06G4735 Fragaria x ananassa HOM05D003635 ORTHO05D004283 2.3e-12 75.5 126 40.5
AUR62002316 Chenopodium quinoa HOM05D003635 ORTHO05D004283 8.8e-12 73.6 81 54.3
Actinidia29205 Actinidia chinensis HOM05D003635 ORTHO05D004283 1.4e-09 66.2 86 48.8
AUR62035965 Chenopodium quinoa HOM05D003635 ORTHO05D004283 4.1e-09 64.7 95 43.2
FAN10G2922 Fragaria x ananassa HOM05D003635 ORTHO05D004283 3.4e-08 61.6 120 39.2
GSVIVG01005970001 Vitis vinifera HOM05D003635 ORTHO05D004283 6.5e-07 57.4 29 75.9
CDE09G0269 Ceratophyllum demersum HOM05D003635 ORTHO05D004283 5.5e-06 54.3 44 61.4
CBR_g32401 Chara braunii HOM05D003635 ORTHO05D004283 9.4e-06 53.5 28 82.1


User provided reference genes

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