Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p37610 Brassica napus HOM05D004330 ORTHO05D005182 0.0e+00 1368.2 709 100.0
BolC6t39595H Brassica oleracea HOM05D004330 ORTHO05D005182 0.0e+00 1363.2 709 99.6
BcaC08g46563 Brassica carinata HOM05D004330 ORTHO05D005182 0.0e+00 1362.8 709 99.6
C06p45370 Brassica napus HOM05D004330 ORTHO05D005182 0.0e+00 1362.8 709 99.6
BcaB03g14885 Brassica carinata HOM05D004330 ORTHO05D005182 0.0e+00 1359.7 709 99.3
BraA07t31323Z Brassica rapa HOM05D004330 ORTHO05D005182 0.0e+00 1359.0 710 99.4
Sp5g26470 Schrenkiella parvula HOM05D004330 ORTHO05D005182 0.0e+00 1348.2 709 98.2
AL2G30885 Arabidopsis lyrata HOM05D004330 ORTHO05D005182 0.0e+00 1319.7 709 96.3
AT1G71270 Arabidopsis thaliana HOM05D004330 ORTHO05D005182 0.0e+00 1310.4 709 95.5
Carub.0002s1815 Capsella rubella HOM05D004330 ORTHO05D005182 0.0e+00 1300.8 709 94.5
Thhalv10018205m.g Eutrema salsugineum HOM05D004330 ORTHO05D005182 0.0e+00 1275.4 709 93.7
Aa31LG4G9240 Aethionema arabicum HOM05D004330 ORTHO05D005182 0.0e+00 1241.5 748 87.7
THA.LOC104803377 Tarenaya hassleriana HOM05D004330 ORTHO05D005182 0.0e+00 1214.1 696 89.1
Cpa.g.sc249.10 Carica papaya HOM05D004330 ORTHO05D005182 0.0e+00 1191.0 701 85.7
THA.LOC104823378 Tarenaya hassleriana HOM05D004330 ORTHO05D005182 0.0e+00 1174.8 693 87.6
GSVIVG01012102001 Vitis vinifera HOM05D004330 ORTHO05D005182 0.0e+00 1173.7 700 83.4
Ciclev10019077m.g Citrus clementina HOM05D004330 ORTHO05D005182 0.0e+00 1171.8 685 85.5
Actinidia16901 Actinidia chinensis HOM05D004330 ORTHO05D005182 0.0e+00 1171.4 707 83.5
Prupe.1G566400 Prunus persica HOM05D004330 ORTHO05D005182 0.0e+00 1165.6 699 83.7
Thecc.08G188100 Theobroma cacao HOM05D004330 ORTHO05D005182 0.0e+00 1164.1 685 85.3
Glyma.03G252000 Glycine max HOM05D004330 ORTHO05D005182 0.0e+00 1163.3 697 83.9
Glyma.19G249400 Glycine max HOM05D004330 ORTHO05D005182 0.0e+00 1162.5 697 83.8
Actinidia29358 Actinidia chinensis HOM05D004330 ORTHO05D005182 0.0e+00 1161.7 707 83.3
Dinv22060 Davidia involucrata HOM05D004330 ORTHO05D005182 0.0e+00 1161.0 695 84.6
Cfa008036 Carpinus fangiana HOM05D004330 ORTHO05D005182 0.0e+00 1159.8 705 82.7
Carub.0002s1817 Capsella rubella HOM05D004330 ORTHO05D005182 0.0e+00 1159.4 696 86.1
Nn6g32085 Nelumbo nucifera HOM05D004330 ORTHO05D005182 0.0e+00 1159.1 688 84.0
Phvul.006G106700 Phaseolus vulgaris HOM05D004330 ORTHO05D005182 0.0e+00 1159.1 697 83.8
RcHm_v2.0_Chr6g0249411 Rosa chinensis HOM05D004330 ORTHO05D005182 0.0e+00 1159.1 699 83.4
arahy.Tifrunner.gnm1.ann1.7LJM3H Arachis hypogaea HOM05D004330 ORTHO05D005182 0.0e+00 1158.7 685 85.4
arahy.Tifrunner.gnm1.ann1.A4ASB6 Arachis hypogaea HOM05D004330 ORTHO05D005182 0.0e+00 1158.7 685 85.4
arahy.Tifrunner.gnm1.ann1.KU2W2N Arachis hypogaea HOM05D004330 ORTHO05D005182 0.0e+00 1158.7 685 85.4
Gorai.009G264800 Gossypium raimondii HOM05D004330 ORTHO05D005182 0.0e+00 1158.7 685 85.0
Gohir.D05G252400 Gossypium hirsutum HOM05D004330 ORTHO05D005182 0.0e+00 1157.5 685 84.8
Gohir.A05G251400 Gossypium hirsutum HOM05D004330 ORTHO05D005182 0.0e+00 1157.1 685 84.8
Lj5g0027584 Lotus japonicus HOM05D004330 ORTHO05D005182 0.0e+00 1156.7 686 85.3
Eucgr.C04264 Eucalyptus grandis HOM05D004330 ORTHO05D005182 0.0e+00 1156.4 700 83.0
MD15G1440000 Malus domestica HOM05D004330 ORTHO05D005182 0.0e+00 1156.4 694 84.3
CSS0001083 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 0.0e+00 1155.2 699 83.0
Manes.15G103100 Manihot esculenta HOM05D004330 ORTHO05D005182 0.0e+00 1152.9 685 84.5
VMungo0540G0979 Vigna mungo HOM05D004330 ORTHO05D005182 0.0e+00 1151.3 697 83.1
FvH4_2g00140 Fragaria vesca HOM05D004330 ORTHO05D005182 0.0e+00 1149.0 699 83.1
Lalb_Chr04g0261991 Lupinus albus HOM05D004330 ORTHO05D005182 0.0e+00 1148.7 688 84.2
MD08G1244900 Malus domestica HOM05D004330 ORTHO05D005182 0.0e+00 1148.3 690 83.6
QL09p001201 Quercus lobata HOM05D004330 ORTHO05D005182 0.0e+00 1147.9 700 83.0
Medtr1g079770 Medicago truncatula HOM05D004330 ORTHO05D005182 0.0e+00 1145.2 686 83.8
FAN24G1765 Fragaria x ananassa HOM05D004330 ORTHO05D005182 0.0e+00 1144.8 704 82.7
CiPaw.03G012300 Carya illinoinensis HOM05D004330 ORTHO05D005182 0.0e+00 1144.0 695 83.3
PGR031G1280 Punica granatum HOM05D004330 ORTHO05D005182 0.0e+00 1143.6 700 81.7
Sabra06G0020300 Salix brachista HOM05D004330 ORTHO05D005182 0.0e+00 1141.7 690 83.5
Aqoxy5G00868 Aquilegia oxysepala HOM05D004330 ORTHO05D005182 0.0e+00 1140.9 695 81.9
CANSAT01G1169 Cannabis sativa HOM05D004330 ORTHO05D005182 0.0e+00 1140.2 699 81.7
Potri.006G027100 Populus trichocarpa HOM05D004330 ORTHO05D005182 0.0e+00 1137.9 687 83.8
Hma1.2p1_0016F.1_g011010 Hydrangea macrophylla HOM05D004330 ORTHO05D005182 0.0e+00 1137.5 700 82.3
AT1G71300 Arabidopsis thaliana HOM05D004330 ORTHO05D005182 0.0e+00 1135.6 746 81.1
PSO210G1668 Papaver somniferum HOM05D004330 ORTHO05D005182 0.0e+00 1135.6 689 83.0
CiPaw.04G008600 Carya illinoinensis HOM05D004330 ORTHO05D005182 0.0e+00 1135.2 705 81.8
Nitab4.5_0000079g0120 Nicotiana tabacum HOM05D004330 ORTHO05D005182 0.0e+00 1134.8 694 82.0
PSO761G0081 Papaver somniferum HOM05D004330 ORTHO05D005182 0.0e+00 1133.6 689 82.9
Nitab4.5_0007117g0020 Nicotiana tabacum HOM05D004330 ORTHO05D005182 0.0e+00 1131.7 697 81.9
TWI12G0377 Tripterygium wilfordii HOM05D004330 ORTHO05D005182 0.0e+00 1128.2 731 79.8
FAN19G3045 Fragaria x ananassa HOM05D004330 ORTHO05D005182 0.0e+00 1127.9 703 81.8
TAR628G0944 Trochodendron aralioides HOM05D004330 ORTHO05D005182 0.0e+00 1125.2 671 83.8
TPR.G10262 Trifolium pratense HOM05D004330 ORTHO05D005182 0.0e+00 1124.0 686 83.2
Ca_09987_v3 Cicer arietinum L. HOM05D004330 ORTHO05D005182 0.0e+00 1122.1 685 82.8
Psat6g142240 Pisum sativum HOM05D004330 ORTHO05D005182 0.0e+00 1122.1 685 82.6
DCAR_024855 Daucus carota HOM05D004330 ORTHO05D005182 0.0e+00 1121.7 728 78.8
HanXRQChr05g0150611 Helianthus annuus HOM05D004330 ORTHO05D005182 0.0e+00 1121.7 705 80.0
CSS0008451 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 0.0e+00 1121.3 711 80.5
Cc10_g16170 Coffea canephora HOM05D004330 ORTHO05D005182 0.0e+00 1121.3 687 82.4
CAN.G473.93 Capsicum annuum HOM05D004330 ORTHO05D005182 0.0e+00 1120.5 692 81.6
Solyc02g094090.4 Solanum lycopersicum HOM05D004330 ORTHO05D005182 0.0e+00 1119.8 701 80.3
Sopen02g038710 Solanum pennellii HOM05D004330 ORTHO05D005182 0.0e+00 1119.0 701 80.3
Rhsim01G0101300 Rhododendron simsii HOM05D004330 ORTHO05D005182 0.0e+00 1118.6 710 79.9
ATR0580G447 Amborella trichopoda HOM05D004330 ORTHO05D005182 0.0e+00 1117.1 697 80.2
Sc17g0000550 Simmondsia chinensis HOM05D004330 ORTHO05D005182 0.0e+00 1115.1 684 82.5
CsaV3_2G033380 Cucumis sativus L. HOM05D004330 ORTHO05D005182 0.0e+00 1114.4 704 80.3
Lj7C415G17 Lonicera japonica HOM05D004330 ORTHO05D005182 0.0e+00 1112.8 698 80.8
Peaxi162Scf00078g01141 Petunia axillaris HOM05D004330 ORTHO05D005182 0.0e+00 1112.1 711 79.5
vmacro06107 Vaccinium macrocarpon HOM05D004330 ORTHO05D005182 0.0e+00 1110.9 733 76.8
MELO3C008109.2 Cucumis melo HOM05D004330 ORTHO05D005182 0.0e+00 1107.8 722 78.5
Duzib177G1138 Durio zibethinus HOM05D004330 ORTHO05D005182 0.0e+00 1105.1 685 82.2
Migut.G00904 Erythranthe guttata HOM05D004330 ORTHO05D005182 0.0e+00 1101.3 685 80.7
AUR62024682 Chenopodium quinoa HOM05D004330 ORTHO05D005182 0.0e+00 1100.9 684 80.7
Sed0024292 Sechium edule HOM05D004330 ORTHO05D005182 0.0e+00 1100.9 704 79.5
EL10As5g23498 Beta vulgaris HOM05D004330 ORTHO05D005182 0.0e+00 1100.1 686 81.0
AL2G30900 Arabidopsis lyrata HOM05D004330 ORTHO05D005182 0.0e+00 1096.6 631 91.1
Ah.11g049400 Amaranthus hybridus HOM05D004330 ORTHO05D005182 0.0e+00 1094.7 684 80.0
MSTRG.22475 Avicennia marina HOM05D004330 ORTHO05D005182 0.0e+00 1094.0 668 81.6
ClCG11G008260 Citrullus lanatus HOM05D004330 ORTHO05D005182 0.0e+00 1094.0 706 79.3
ECA246G0284 Erigeron canadensis HOM05D004330 ORTHO05D005182 0.0e+00 1093.2 685 79.7
SalBow6G7193 Salvia bowleyana HOM05D004330 ORTHO05D005182 0.0e+00 1084.7 730 75.9
Oeu020638.1 Olea europaea HOM05D004330 ORTHO05D005182 4.9e-312 1073.5 764 72.9
Os03g0417900 Oryza sativa ssp. japonica HOM05D004330 ORTHO05D005182 1.4e-309 1065.8 687 77.0
Nitab4.5_0007150g0080 Nicotiana tabacum HOM05D004330 ORTHO05D005182 1.2e-308 1062.8 703 77.8
Lsat_1_v5_gn_6_109860 Lactuca sativa HOM05D004330 ORTHO05D005182 1.4e-306 1055.8 669 79.2
Aqoxy2G00735 Aquilegia oxysepala HOM05D004330 ORTHO05D005182 1.0e-304 1049.7 703 74.8
SalBow6G1408 Salvia bowleyana HOM05D004330 ORTHO05D005182 2.3e-304 1048.5 730 74.8
Nitab4.5_0002887g0010 Nicotiana tabacum HOM05D004330 ORTHO05D005182 1.4e-301 1039.3 666 79.9
unitig_37.g12692 Utricularia gibba HOM05D004330 ORTHO05D005182 8.8e-296 1020.0 706 73.8
AUR62011839 Chenopodium quinoa HOM05D004330 ORTHO05D005182 1.2e-279 966.5 591 81.4
AagrBONN_evm.TU.Sc2ySwM_228.5612 Anthoceros agrestis HOM05D004330 ORTHO05D005182 4.4e-279 964.5 689 69.4
AagrBONN_evm.TU.Sc2ySwM_228.5613 Anthoceros agrestis HOM05D004330 ORTHO05D005182 4.4e-279 964.5 689 69.4
COL.COLO4_37491 Corchorus olitorius HOM05D004330 ORTHO05D005182 2.2e-278 962.2 631 78.6
Mapoly0091s0001 Marchantia polymorpha HOM05D004330 ORTHO05D005182 1.4e-272 943.0 704 65.8
SMO304G0018 Selaginella moellendorffii HOM05D004330 ORTHO05D005182 1.8e-269 932.6 691 68.0
HPP92_006305 Vanilla planifolia HOM05D004330 ORTHO05D005182 2.1e-265 919.1 584 77.6
Pp3c4_27380 Physcomitrium patens HOM05D004330 ORTHO05D005182 3.6e-265 918.3 697 66.1
Haze_02242 Corylus avellana HOM05D004330 ORTHO05D005182 2.5e-258 895.6 683 69.8
Hund19537 Selenicereus undatus HOM05D004330 ORTHO05D005182 1.4e-256 889.8 554 80.3
Zm00001eb393130 Zea mays HOM05D004330 ORTHO05D005182 4.9e-254 881.3 566 76.1
vmacro23409 Vaccinium macrocarpon HOM05D004330 ORTHO05D005182 3.5e-252 875.2 589 75.2
Atru.chr13.2589 Acer truncatum HOM05D004330 ORTHO05D005182 2.3e-248 862.4 494 87.0
SHI24508 Sapria himalayana HOM05D004330 ORTHO05D005182 2.7e-244 849.0 675 67.0
MBI16_g23303_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 6.2e-233 811.2 491 82.9
Os10g0488300 Oryza sativa ssp. japonica HOM05D004330 ORTHO05D005182 1.9e-226 789.6 681 58.1
Zm00001eb045280 Zea mays HOM05D004330 ORTHO05D005182 6.4e-214 748.0 693 54.7
CDE03G0141 Ceratophyllum demersum HOM05D004330 ORTHO05D005182 3.1e-200 702.6 441 77.3
COL.COLO4_33595 Corchorus olitorius HOM05D004330 ORTHO05D005182 1.5e-191 673.7 447 78.7
SEGI_21093 Sequoiadendron giganteum HOM05D004330 ORTHO05D005182 3.0e-155 553.1 328 81.7
MCO11G104 Micromonas commoda HOM05D004330 ORTHO05D005182 2.8e-153 546.6 784 41.2
Cre08.g367200 Chlamydomonas reinhardtii HOM05D004330 ORTHO05D005182 5.0e-142 509.2 757 37.9
Migut.C00321 Erythranthe guttata HOM05D004330 ORTHO05D005182 2.0e-130 470.7 280 82.9
CSS0031487 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 3.6e-124 449.9 270 80.4
Haze_02247 Corylus avellana HOM05D004330 ORTHO05D005182 2.9e-121 440.3 269 81.0
CBR_g54934 Chara braunii HOM05D004330 ORTHO05D005182 7.1e-120 435.6 368 61.1
PRCOL_00005416 Prasinoderma coloniale HOM05D004330 ORTHO05D005182 1.1e-115 421.8 747 36.4
COL.COLO4_00397 Corchorus olitorius HOM05D004330 ORTHO05D005182 5.6e-109 399.4 236 83.1
SGA_v2.0_scaffold227G43197 Striga asiatica HOM05D004330 ORTHO05D005182 6.2e-108 396.0 253 76.3
MBI16_g41537_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 3.1e-107 393.7 233 81.1
HPP92_006235 Vanilla planifolia HOM05D004330 ORTHO05D005182 1.0e-102 378.6 259 76.1
CDE03G0281 Ceratophyllum demersum HOM05D004330 ORTHO05D005182 1.4e-96 358.2 252 73.8
HPP92_006237 Vanilla planifolia HOM05D004330 ORTHO05D005182 2.5e-77 294.3 182 75.8
SalBow1G7663 Salvia bowleyana HOM05D001091 ORTHO05D001020 1.7e-73 281.6 215 67.9
FvH4_6g22200 Fragaria vesca HOM05D004330 ORTHO05D005182 2.2e-73 281.2 192 78.6
MBI13_g40628_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 5.1e-70 270.0 148 85.1
Rhsim02G0174800 Rhododendron simsii HOM05D004330 ORTHO05D005182 3.1e-67 260.8 195 68.2
FAN14G0768 Fragaria x ananassa HOM05D004330 ORTHO05D005182 1.6e-58 231.9 192 68.8
CBR_g54936 Chara braunii HOM05D000019 ORTHO05D000353 3.8e-57 227.3 155 64.5
Actinidia09912 Actinidia chinensis HOM05D004330 ORTHO05D005182 1.4e-54 218.8 167 67.7
Oeu028617.1 Olea europaea HOM05D004330 ORTHO05D005182 9.7e-53 212.6 156 67.9
QL04p036179 Quercus lobata HOM05D004330 ORTHO05D037441 3.7e-52 210.7 180 66.7
QL09p008022 Quercus lobata HOM05D004330 ORTHO05D005182 4.8e-52 210.3 214 56.5
Cfa027264 Carpinus fangiana HOM05D004330 ORTHO05D005182 3.5e-50 204.1 489 29.2
Nitab4.5_0006062g0030 Nicotiana tabacum HOM05D004330 ORTHO05D005182 3.4e-45 187.6 119 80.7
Hund19535 Selenicereus undatus HOM05D004330 ORTHO05D005182 2.8e-44 184.5 114 82.5
HanXRQChr10g0312231 Helianthus annuus HOM05D004330 ORTHO05D005182 4.2e-40 170.6 104 79.8
Rhsim02G0174700 Rhododendron simsii HOM05D004330 ORTHO05D005182 2.1e-39 168.3 111 79.3
SEGI_19884 Sequoiadendron giganteum HOM05D004330 ORTHO05D005182 8.8e-38 162.9 111 73.9
CARHR064590 Cardamine hirsuta HOM05D004330 ORTHO05D005182 7.5e-37 159.8 128 71.9
C06p46260 Brassica napus HOM05D004330 ORTHO05D005182 4.5e-34 150.6 96 79.2
CARHR152420 Cardamine hirsuta HOM05D004330 ORTHO05D005182 1.7e-33 148.7 139 64.7
C06p46170 Brassica napus HOM05D004330 ORTHO05D005182 4.3e-32 144.1 96 76.0
C06p46210 Brassica napus HOM05D004330 ORTHO05D005182 4.3e-32 144.1 96 76.0
MBI13_g40627_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 7.3e-24 116.7 99 62.6
Haze_14000 Corylus avellana HOM05D004330 ORTHO05D005182 4.4e-21 107.5 73 74.0
Zm00001eb371470 Zea mays HOM05D003702 ORTHO05D004653 5.8e-21 107.1 63 79.4
EL10Ac2g03252 Beta vulgaris HOM05D004330 ORTHO05D005182 3.7e-20 104.4 69 71.0
Zm00001eb294100 Zea mays HOM05D003702 ORTHO05D004653 1.4e-19 102.4 77 68.8
Zm00001eb378040 Zea mays HOM05D004330 ORTHO05D000629 1.9e-19 102.1 59 83.1
HPP92_006236 Vanilla planifolia HOM05D004330 ORTHO05D005182 4.1e-19 100.9 57 84.2
COL.COLO4_23503 Corchorus olitorius HOM05D004330 ORTHO05D005182 7.0e-19 100.1 69 72.5
HPP92_006372 Vanilla planifolia HOM05D004330 ORTHO05D005182 6.6e-17 93.6 103 50.5
EL10Ac2g03375 Beta vulgaris HOM05D015602 ORTHO05D006373 2.3e-14 85.1 65 67.7
GSVIVG01018671001 Vitis vinifera HOM05D004330 ORTHO05D005182 3.2e-11 74.7 60 63.3
SGA_v2.0_scaffold123G33447 Striga asiatica HOM05D004330 ORTHO05D005182 4.1e-11 74.3 78 48.7
QL05p049490 Quercus lobata HOM05D000205 ORTHO05D037441 1.5e-08 65.9 40 80.0
BcaB03g14888 Brassica carinata HOM05D005563 ORTHO05D006667 2.5e-08 65.1 66 59.1
Haze_02240 Corylus avellana HOM05D000586 ORTHO05D001010 2.3e-06 58.5 48 60.4
COL.COLO4_37492 Corchorus olitorius HOM05D004330 ORTHO05D005182 3.1e-06 58.2 38 71.1


User provided reference genes

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