Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 2155.2 1073 100.0
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 2118.2 1073 98.1
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 0.0e+00 2115.9 1111 95.8
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 0.0e+00 2111.6 1073 97.9
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 0.0e+00 2100.5 1073 97.5
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 0.0e+00 2032.7 1075 93.5
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 2011.5 1087 92.8
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 0.0e+00 2006.9 1076 92.4
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 0.0e+00 2004.6 1089 92.4
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 0.0e+00 1987.2 1078 91.4
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 0.0e+00 1974.1 1076 90.4
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 0.0e+00 1914.4 1039 91.4
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 0.0e+00 1905.6 1077 87.7
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 0.0e+00 1850.9 1081 84.6
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 0.0e+00 1637.1 1089 74.9
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1628.6 1078 78.6
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 0.0e+00 1602.8 1089 74.0
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 0.0e+00 1583.2 1086 71.7
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 0.0e+00 1580.1 1106 72.3
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 0.0e+00 1578.5 1092 72.9
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 0.0e+00 1573.5 1099 72.7
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 0.0e+00 1572.8 1090 72.2
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 0.0e+00 1571.2 1091 71.8
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 0.0e+00 1570.4 1092 72.7
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 0.0e+00 1569.3 1087 72.3
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 0.0e+00 1568.1 1092 72.3
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 0.0e+00 1567.7 1096 72.1
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 0.0e+00 1552.0 1111 70.2
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 0.0e+00 1549.3 1117 70.0
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 0.0e+00 1548.9 1087 72.2
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 0.0e+00 1526.5 1088 71.3
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 0.0e+00 1508.0 998 75.3
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 0.0e+00 1504.2 1094 70.1
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 0.0e+00 1500.3 1084 71.2
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 0.0e+00 1500.3 1090 69.0
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 0.0e+00 1496.9 1083 71.2
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1494.2 1085 70.4
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 0.0e+00 1491.5 1087 68.6
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 0.0e+00 1488.0 1099 68.8
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 0.0e+00 1486.9 1094 69.1
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1474.1 1078 69.9
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1459.5 1135 66.9
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1456.0 1097 69.3
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 0.0e+00 1453.3 1132 65.5
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 0.0e+00 1453.0 1095 68.3
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 0.0e+00 1452.2 1118 65.2
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 0.0e+00 1449.9 1103 67.7
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1440.2 1096 67.6
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 0.0e+00 1438.3 1099 66.5
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 0.0e+00 1432.5 1080 67.3
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 0.0e+00 1431.4 1087 66.7
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 0.0e+00 1428.7 1020 69.4
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 0.0e+00 1427.5 1082 67.5
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 0.0e+00 1426.4 1115 64.7
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 0.0e+00 1424.1 1074 67.8
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 0.0e+00 1423.3 1086 67.8
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 0.0e+00 1421.8 1085 66.2
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 0.0e+00 1421.0 1147 64.1
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 0.0e+00 1412.5 1082 66.0
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 0.0e+00 1410.6 1086 66.0
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 0.0e+00 1407.1 1095 64.7
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 0.0e+00 1406.3 1083 66.0
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 0.0e+00 1405.6 1191 63.6
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 0.0e+00 1404.4 1124 64.6
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 0.0e+00 1395.6 1081 65.6
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 0.0e+00 1391.7 1085 65.4
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 0.0e+00 1387.9 1092 64.2
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 0.0e+00 1387.1 1085 65.3
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 0.0e+00 1386.7 1090 64.9
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1385.2 1078 66.9
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 0.0e+00 1369.8 1077 65.7
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 0.0e+00 1364.7 1094 64.5
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 0.0e+00 1359.4 1084 64.2
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 0.0e+00 1356.7 1110 62.9
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 0.0e+00 1347.0 870 75.6
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 0.0e+00 1339.3 1209 58.4
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 0.0e+00 1328.2 870 74.9
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 0.0e+00 1326.6 1169 60.4
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 0.0e+00 1318.5 1082 62.0
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 0.0e+00 1305.0 1088 62.3
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 0.0e+00 1291.9 890 71.1
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 0.0e+00 1275.0 869 72.0
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 0.0e+00 1262.3 858 71.3
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 0.0e+00 1257.3 1092 60.5
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 0.0e+00 1256.5 820 75.5
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 0.0e+00 1247.3 848 72.2
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 0.0e+00 1233.0 1079 59.5
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 0.0e+00 1225.3 875 69.5
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 0.0e+00 1217.6 870 69.3
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 0.0e+00 1205.3 927 65.8
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 0.0e+00 1200.3 1213 55.3
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1196.8 1056 61.3
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 0.0e+00 1194.1 1051 59.8
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 0.0e+00 1191.8 825 69.9
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1187.9 1000 63.1
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 0.0e+00 1104.7 864 64.4
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 0.0e+00 1087.0 1060 54.9
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 2.3e-292 1009.2 700 71.7
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 5.1e-279 964.9 902 57.2
BraA01t03995Z Brassica rapa HOM05D001849 ORTHO05D004689 5.4e-273 944.9 536 91.2
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 1.8e-268 929.9 997 49.6
CARHR088980 Cardamine hirsuta HOM05D001849 ORTHO05D004689 4.3e-262 908.7 496 92.5
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 4.0e-260 902.1 982 49.8
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 4.3e-254 882.1 644 68.2
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 1.3e-245 854.0 598 70.7
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 1.3e-245 854.0 974 46.9
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 3.0e-231 806.2 712 59.3
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 7.4e-222 775.0 949 45.9
Os11g0643700 Oryza sativa ssp. japonica HOM05D001849 ORTHO05D004689 7.3e-161 572.4 472 62.7
Ca_23412_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 1.8e-151 541.2 406 69.0
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 7.6e-150 535.8 1068 34.7
FAN05G4033 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.1e-144 517.7 397 67.0
Cpa.g.sc169.27 Carica papaya HOM05D001849 ORTHO05D004689 1.2e-134 485.3 318 75.2
SEGI_21815 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 7.2e-116 422.9 389 56.8
Cpa.g.sc169.28 Carica papaya HOM05D001849 ORTHO05D004689 4.7e-91 340.5 239 69.9
QL11p014752 Quercus lobata HOM05D001849 ORTHO05D004689 2.9e-72 278.1 290 50.7
CSS0033574 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.2e-71 274.6 223 64.1
CSS0020573 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.4e-63 249.2 233 56.7
Cpa.g.sc169.30 Carica papaya HOM05D001849 ORTHO05D004689 2.5e-60 238.4 177 66.7
GSVIVG01016718001 Vitis vinifera HOM05D001849 ORTHO05D004689 3.3e-60 238.0 220 60.5
Glyma.16G010300 Glycine max HOM05D001849 ORTHO05D004689 1.4e-58 232.6 160 72.5
Lalb_Chr10g0101331 Lupinus albus HOM05D001849 ORTHO05D004689 5.4e-55 220.7 211 58.3
CSS0047517 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.2e-51 207.2 174 66.1
Cc04_g01050 Coffea canephora HOM05D001849 ORTHO05D004689 1.1e-47 196.4 212 55.2
CSS0019722 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.0e-45 188.3 192 58.3
HPP92_021920 Vanilla planifolia HOM05D001849 ORTHO05D004689 3.0e-45 188.3 144 65.3
CAN.G1243.8 Capsicum annuum HOM05D001849 ORTHO05D004689 4.0e-42 177.9 194 53.6
Cpa.g.sc169.33 Carica papaya HOM05D001849 ORTHO05D004689 9.0e-42 176.8 176 56.8
Duzib235G0009 Durio zibethinus HOM05D001849 ORTHO05D004689 2.7e-38 165.2 174 54.0
SEGI_09459 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 4.6e-38 164.5 170 50.6
Lsat_1_v5_gn_3_42421 Lactuca sativa HOM05D001849 ORTHO05D004689 1.3e-37 162.9 160 53.8
Hund18673 Selenicereus undatus HOM05D001849 ORTHO05D004689 1.3e-35 156.4 176 53.4
MBI18_g40032_MAGBIO Magnolia biondii HOM05D000132 ORTHO05D000058 2.1e-35 155.6 196 48.0
Cpa.g.sc169.31 Carica papaya HOM05D001849 ORTHO05D004689 1.7e-32 146.0 90 80.0
CDE07G1706 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 3.2e-31 141.7 208 44.2
TAR730G0002 Trochodendron aralioides HOM05D001849 ORTHO05D004689 1.2e-30 139.8 155 51.0
SEGI_30532 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 2.7e-30 138.7 88 71.6
Lsat_1_v5_gn_8_46020 Lactuca sativa HOM05D001849 ORTHO05D004689 5.6e-28 131.0 107 64.5
BcaNung06672 Brassica carinata HOM05D001849 ORTHO05D004689 2.1e-27 129.0 212 42.9
HanXRQChr11g0341991 Helianthus annuus HOM05D001849 ORTHO05D004689 2.2e-24 119.0 90 65.6
Cpa.g.sc169.29 Carica papaya HOM05D001849 ORTHO05D004689 8.4e-24 117.1 99 58.6
CSS0036362 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.1e-23 116.7 100 58.0
CSS0036461 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.4e-23 116.3 100 58.0
Lsat_1_v5_gn_7_52500 Lactuca sativa HOM05D001849 ORTHO05D004689 4.2e-23 114.8 165 43.6
PRCOL_00005073 Prasinoderma coloniale HOM05D001849 ORTHO05D004689 6.0e-22 110.9 550 25.6
Cre10.g425675 Chlamydomonas reinhardtii HOM05D001849 ORTHO05D004689 1.3e-19 103.2 313 26.5
Atru.chr12.2396 Acer truncatum HOM05D001849 ORTHO05D004689 2.8e-19 102.1 143 46.2
BolC2t10453H Brassica oleracea HOM05D001849 ORTHO05D004689 1.8e-18 99.4 55 90.9
MCO04G165 Micromonas commoda HOM05D001849 ORTHO05D004689 5.3e-18 97.8 440 24.8
C02p44100 Brassica napus HOM05D001849 ORTHO05D004689 7.6e-17 94.0 55 87.3
SEGI_11558 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 8.4e-16 90.5 93 50.5
MBI03_g16538_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.3e-13 83.2 75 56.0
MBI13_g27860_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 3.0e-13 82.0 55 69.1
MBI04_g26258_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.5e-12 79.7 54 66.7
MBI15_g17575_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 9.7e-12 77.0 51 70.6
CSS0004697 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 4.8e-11 74.7 100 42.0
Zm00001eb307710 Zea mays HOM05D001849 ORTHO05D004689 4.8e-11 74.7 70 60.0
PGSC0003DMG402004368 Solanum tuberosum HOM05D001849 ORTHO05D004689 1.1e-10 73.6 71 54.9
SMO304G0058 Selaginella moellendorffii HOM05D042764 ORTHO05D004689 1.8e-10 72.8 192 29.7
Hma1.2p1_0225F.1_g094790 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 1.2e-09 70.1 95 45.3
Atru.chr12.2376 Acer truncatum HOM05D001849 ORTHO05D004689 5.9e-09 67.8 108 43.5
C01p30760 Brassica napus HOM05D001849 ORTHO05D042635 3.8e-08 65.1 42 78.6
CSS0002239 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 8.5e-08 63.9 41 75.6
CSS0017686 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.5e-07 62.4 50 62.0
Hma1.2p1_0436F.1_g152830 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 1.2e-06 60.1 69 49.3


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